CircRNA Information

General Information
circRNA Basic Information
CircID chr12:52517606|52517968
Strand +
CircType exon
Host Gene ENSG00000186081.10;
Algorism CIRI2;
Sequence AAGGTGGAGCTGGAGGCCAAGGTTGATGCACTGATGGATGAGATTAACTTCATGAAGATGTTCTTTGATGCGGTAAGAAACTTATCTAAATTTTTCACATGGGTGGGTTTTTTTTCCTCAAGTTGTCATATCACAATGAGTGAAAGATTTGAATGGAACTGACATTAAATAACACAACACAGAACCAGATGACCGACTCCAAATCTCCCTGCAGGAGCTGTCCCAGATGCAGACGCATGTCTCTGACACCTCAGTGGTCCTCTCCATGGACAACAACCGCAACCTGGACCTGGATAGCATCATCGCTGAGGTCAAGGCCCAGTATGAGGAGATTGCCAACCGCAGCCGGACAGAAGCCGAGTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:52517606|52517968 hsa-miR-192-5p 0 0 1
chr12:52517606|52517968 hsa-miR-192-3p 0 0 1
chr12:52517606|52517968 hsa-miR-148a-5p 0 0 1
chr12:52517606|52517968 hsa-miR-148a-3p 0 0 1
chr12:52517606|52517968 hsa-miR-182-5p 0 0 1
chr12:52517606|52517968 hsa-miR-182-3p 0 0 1
chr12:52517606|52517968 hsa-miR-215-5p 0 0 1
chr12:52517606|52517968 hsa-miR-215-3p 0 0 1
chr12:52517606|52517968 hsa-miR-216a-5p 0 0 1
chr12:52517606|52517968 hsa-miR-216a-3p 0 0 1
chr12:52517606|52517968 hsa-miR-223-5p 0 0 1
chr12:52517606|52517968 hsa-miR-223-3p 0 0 1
chr12:52517606|52517968 hsa-miR-152-5p 0 0 1
chr12:52517606|52517968 hsa-miR-152-3p 0 0 1
chr12:52517606|52517968 hsa-miR-185-5p 0 0 1
chr12:52517606|52517968 hsa-miR-185-3p 0 0 1
chr12:52517606|52517968 hsa-miR-148b-5p 0 0 1
chr12:52517606|52517968 hsa-miR-148b-3p 0 0 1
chr12:52517606|52517968 hsa-miR-425-5p 0 0 1
chr12:52517606|52517968 hsa-miR-425-3p 0 0 1
chr12:52517606|52517968 hsa-miR-433-5p 0 0 1
chr12:52517606|52517968 hsa-miR-433-3p 0 0 1
chr12:52517606|52517968 hsa-miR-577 0 0 1
chr12:52517606|52517968 hsa-miR-604 0 0 1
chr12:52517606|52517968 hsa-miR-607 0 0 1
chr12:52517606|52517968 hsa-miR-766-5p 0 0 1
chr12:52517606|52517968 hsa-miR-766-3p 0 0 1
chr12:52517606|52517968 hsa-miR-190b-5p 0 0 1
chr12:52517606|52517968 hsa-miR-190b-3p 0 0 1
chr12:52517606|52517968 hsa-miR-216b-5p 0 0 1
chr12:52517606|52517968 hsa-miR-216b-3p 0 0 1
chr12:52517606|52517968 hsa-miR-1205 0 0 1
chr12:52517606|52517968 hsa-miR-1322 0 0 1
chr12:52517606|52517968 hsa-miR-1224-5p 0 0 1
chr12:52517606|52517968 hsa-miR-1289 0 0 1
chr12:52517606|52517968 hsa-miR-1302 0 0 1
chr12:52517606|52517968 hsa-miR-548d-3p 0 0 1
chr12:52517606|52517968 hsa-miR-768-5p 0 0 1
chr12:52517606|52517968 hsa-miR-549 0 0 1
chr12:52517606|52517968 hsa-miR-190 0 0 1
chr12:52517606|52517968 hsa-miR-601 1 0 0
chr12:52517606|52517968 hsa-miR-1183 1 0 0
chr12:52517606|52517968 hsa-miR-4281 1 0 0
chr12:52517606|52517968 hsa-miR-4450 1 0 0
chr12:52517606|52517968 hsa-miR-4706 1 0 0
chr12:52517606|52517968 hsa-miR-4739 1 0 0
chr12:52517606|52517968 hsa-miR-5090 1 0 0
chr12:52517606|52517968 hsa-miR-10226 1 0 0
chr12:52517606|52517968 hsa-miR-6734-5p 1 0 0
chr12:52517606|52517968 hsa-miR-212-5p 1 0 0
chr12:52517606|52517968 hsa-miR-432-5p 1 0 0
chr12:52517606|52517968 hsa-miR-6796-5p 1 0 0
chr12:52517606|52517968 hsa-miR-656-5p 1 0 0
chr12:52517606|52517968 hsa-miR-6798-5p 1 0 0
chr12:52517606|52517968 hsa-miR-486-3p 1 0 0
chr12:52517606|52517968 hsa-miR-939-3p 1 0 0
chr12:52517606|52517968 hsa-miR-1307-3p 1 0 0
chr12:52517606|52517968 hsa-miR-4638-5p 1 0 0
chr12:52517606|52517968 hsa-miR-6813-3p 1 0 0
chr12:52517606|52517968 hsa-miR-6720-3p 1 0 0
chr12:52517606|52517968 hsa-miR-7112-3p 1 0 0
chr12:52517606|52517968 hsa-miR-4671-3p 1 0 0
chr12:52517606|52517968 hsa-miR-10400-5p 1 0 0
chr12:52517606|52517968 hsa-miR-1207-5p 1 0 0
chr12:52517606|52517968 hsa-miR-6870-5p 1 0 0
chr12:52517606|52517968 hsa-miR-6754-5p 1 0 0
chr12:52517606|52517968 hsa-miR-6722-3p 1 0 0
chr12:52517606|52517968 hsa-miR-6889-5p 1 0 0
chr12:52517606|52517968 hsa-miR-6511b-5p 1 0 0
chr12:52517606|52517968 hsa-miR-3085-5p 1 0 0
chr12:52517606|52517968 hsa-miR-504-5p 1 0 0
chr12:52517606|52517968 hsa-miR-323b-5p 1 0 0
chr12:52517606|52517968 hsa-miR-6500-5p 1 0 0
chr12:52517606|52517968 hsa-miR-10397-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr12:52517606|52517968
ORF Type ORF1
Protein Length 50
Nucleotide Length 153
Protein Sequence MEAKVDALMDEINFMKMFFDAVRNLSKFFTWVGFFSSSCHITMSERFEWN
Nucleotide Sequence CTGGAGGCCAAGGTTGATGCACTGATGGATGAGATTAACTTCATGAAGATGTTCTTTGATGCGGTAAGAAACTTATCTAAATTTTTCACATGGGTGGGTTTTTTTTCCTCAAGTTGTCATATCACAATGAGTGAAAGATTTGAATGGAACTGA
CircID chr12:52517606|52517968
ORF Type ORF2
Protein Length 51
Nucleotide Length 153
Protein Sequence MQELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEEIANRSRTEAE
Nucleotide Sequence CTGCAGGAGCTGTCCCAGATGCAGACGCATGTCTCTGACACCTCAGTGGTCCTCTCCATGGACAACAACCGCAACCTGGACCTGGATAGCATCATCGCTGAGGTCAAGGCCCAGTATGAGGAGATTGCCAACCGCAGCCGGACAGAAGCCGAG
CircID chr12:52517606|52517968
ORF Type ORF3
Protein Length 70
Nucleotide Length 210
Protein Sequence MELTLNNTTQNQMTDSKSPCRSCPRCRRMSLTPQWSSPWTTTATWTWIASSLRSRPSMRRLPTAAGQKPS
Nucleotide Sequence ATGGAACTGACATTAAATAACACAACACAGAACCAGATGACCGACTCCAAATCTCCCTGCAGGAGCTGTCCCAGATGCAGACGCATGTCTCTGACACCTCAGTGGTCCTCTCCATGGACAACAACCGCAACCTGGACCTGGATAGCATCATCGCTGAGGTCAAGGCCCAGTATGAGGAGATTGCCAACCGCAGCCGGACAGAAGCCGAGT
CircID chr12:52517606|52517968
ORF Type ORF4
Protein Length 75
Nucleotide Length 228
Protein Sequence MRLAISSYWALTSAMMLSRSRLRLLSMERTTEVSETCVCIWDSSCREIWSRSSGSVLCYLMSVPFKSFTHCDMTT
Nucleotide Sequence CTGCGGTTGGCAATCTCCTCATACTGGGCCTTGACCTCAGCGATGATGCTATCCAGGTCCAGGTTGCGGTTGTTGTCCATGGAGAGGACCACTGAGGTGTCAGAGACATGCGTCTGCATCTGGGACAGCTCCTGCAGGGAGATTTGGAGTCGGTCATCTGGTTCTGTGTTGTGTTATTTAATGTCAGTTCCATTCAAATCTTTCACTCATTGTGATATGACAACTTGA
CircID chr12:52517606|52517968
ORF Type ORF5
Protein Length 29
Nucleotide Length 90
Protein Sequence MRCQRHASASGTAPAGRFGVGHLVLCCVI
Nucleotide Sequence CTGAGGTGTCAGAGACATGCGTCTGCATCTGGGACAGCTCCTGCAGGGAGATTTGGAGTCGGTCATCTGGTTCTGTGTTGTGTTATTTAA
CircID chr12:52517606|52517968
ORF Type ORF6
Protein Length 35
Nucleotide Length 108
Protein Sequence MRLHLGQLLQGDLESVIWFCVVLFNVSSIQIFHSL
Nucleotide Sequence ATGCGTCTGCATCTGGGACAGCTCCTGCAGGGAGATTTGGAGTCGGTCATCTGGTTCTGTGTTGTGTTATTTAATGTCAGTTCCATTCAAATCTTTCACTCATTGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab