CircRNA Information

General Information
circRNA Basic Information
CircID chr12:52517659|52517965
Strand -
CircType exon
Host Gene ENSG00000186081.10;
Algorism CIRI2;
Sequence CTCAGCGATGATGCTATCCAGGTCCAGGTTGCGGTTGTTGTCCATGGAGAGGACCACTGAGGTGTCAGAGACATGCGTCTGCATCTGGGACAGCTCCTGCAGGGAGATTTGGAGTCGGTCATCTGGTTCTGTGTTGTGTTATTTAATGTCAGTTCCATTCAAATCTTTCACTCATTGTGATATGACAACTTGAGGAAAAAAAACCCACCCATGTGAAAAATTTAGATAAGTTTCTTACCGCATCAAAGAACATCTTCATGAAGTTAATCTCATCCATCAGTGCATCAACCTTGGCCTCCAGCTCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:52517659|52517965 hsa-miR-23a-5p 0 0 1
chr12:52517659|52517965 hsa-miR-23a-3p 0 0 1
chr12:52517659|52517965 hsa-miR-23b-5p 0 0 1
chr12:52517659|52517965 hsa-miR-23b-3p 0 0 1
chr12:52517659|52517965 hsa-miR-136-5p 0 0 1
chr12:52517659|52517965 hsa-miR-136-3p 0 0 1
chr12:52517659|52517965 hsa-miR-382-5p 0 0 1
chr12:52517659|52517965 hsa-miR-382-3p 0 0 1
chr12:52517659|52517965 hsa-miR-433-5p 0 0 1
chr12:52517659|52517965 hsa-miR-433-3p 0 0 1
chr12:52517659|52517965 hsa-miR-492 0 0 1
chr12:52517659|52517965 hsa-miR-593-5p 0 0 1
chr12:52517659|52517965 hsa-miR-593-3p 0 0 1
chr12:52517659|52517965 hsa-miR-619-5p 0 0 1
chr12:52517659|52517965 hsa-miR-619-3p 0 0 1
chr12:52517659|52517965 hsa-miR-629-5p 0 0 1
chr12:52517659|52517965 hsa-miR-629-3p 0 0 1
chr12:52517659|52517965 hsa-miR-631 0 0 1
chr12:52517659|52517965 hsa-miR-650 1 0 1
chr12:52517659|52517965 hsa-miR-708-5p 0 0 1
chr12:52517659|52517965 hsa-miR-708-3p 0 0 1
chr12:52517659|52517965 hsa-miR-1238-5p 0 0 1
chr12:52517659|52517965 hsa-miR-1238-3p 0 0 1
chr12:52517659|52517965 hsa-miR-1205 0 0 1
chr12:52517659|52517965 hsa-miR-1286 0 0 1
chr12:52517659|52517965 hsa-miR-1293 0 0 1
chr12:52517659|52517965 hsa-miR-1255a 0 0 1
chr12:52517659|52517965 hsa-miR-490-3p 0 0 1
chr12:52517659|52517965 hsa-miR-28-5p 0 0 1
chr12:52517659|52517965 hsa-miR-513a-3p 0 0 1
chr12:52517659|52517965 hsa-miR-1255b 0 0 1
chr12:52517659|52517965 hsa-miR-1308 0 0 1
chr12:52517659|52517965 hsa-miR-768-3p 0 0 1
chr12:52517659|52517965 hsa-miR-637 1 0 0
chr12:52517659|52517965 hsa-miR-762 1 0 0
chr12:52517659|52517965 hsa-miR-378b 1 0 0
chr12:52517659|52517965 hsa-miR-378c 1 0 0
chr12:52517659|52517965 hsa-miR-4266 1 0 0
chr12:52517659|52517965 hsa-miR-3652 1 0 0
chr12:52517659|52517965 hsa-miR-3661 1 0 0
chr12:52517659|52517965 hsa-miR-378e 1 0 0
chr12:52517659|52517965 hsa-miR-4443 1 0 0
chr12:52517659|52517965 hsa-miR-3135b 1 0 0
chr12:52517659|52517965 hsa-miR-4498 1 0 0
chr12:52517659|52517965 hsa-miR-4508 1 0 0
chr12:52517659|52517965 hsa-miR-1587 1 0 0
chr12:52517659|52517965 hsa-miR-3975 1 0 0
chr12:52517659|52517965 hsa-miR-4651 1 0 0
chr12:52517659|52517965 hsa-miR-5683 1 0 0
chr12:52517659|52517965 hsa-miR-6085 1 0 0
chr12:52517659|52517965 hsa-miR-6165 1 0 0
chr12:52517659|52517965 hsa-miR-8089 1 0 0
chr12:52517659|52517965 hsa-miR-12114 1 0 0
chr12:52517659|52517965 hsa-miR-12129 1 0 0
chr12:52517659|52517965 hsa-miR-4731-5p 1 0 0
chr12:52517659|52517965 hsa-miR-8071 1 0 0
chr12:52517659|52517965 hsa-miR-6089 1 0 0
chr12:52517659|52517965 hsa-miR-6880-5p 1 0 0
chr12:52517659|52517965 hsa-miR-185-3p 1 0 0
chr12:52517659|52517965 hsa-miR-6827-5p 1 0 0
chr12:52517659|52517965 hsa-miR-6782-5p 1 0 0
chr12:52517659|52517965 hsa-miR-6874-5p 1 0 0
chr12:52517659|52517965 hsa-miR-5008-5p 1 0 0
chr12:52517659|52517965 hsa-miR-4764-5p 1 0 0
chr12:52517659|52517965 hsa-miR-4717-3p 1 0 0
chr12:52517659|52517965 hsa-miR-6781-5p 1 0 0
chr12:52517659|52517965 hsa-miR-516b-5p 1 0 0
chr12:52517659|52517965 hsa-miR-4776-5p 1 0 0
chr12:52517659|52517965 hsa-miR-6510-3p 1 0 0
chr12:52517659|52517965 hsa-miR-1233-5p 1 0 0
chr12:52517659|52517965 hsa-miR-6769b-5p 1 0 0
chr12:52517659|52517965 hsa-miR-6812-5p 1 0 0
chr12:52517659|52517965 hsa-miR-5001-5p 1 0 0
chr12:52517659|52517965 hsa-miR-6726-5p 1 0 0
chr12:52517659|52517965 hsa-miR-6756-5p 1 0 0
chr12:52517659|52517965 hsa-miR-6803-5p 1 0 0
chr12:52517659|52517965 hsa-miR-6813-5p 1 0 0
chr12:52517659|52517965 hsa-miR-6842-5p 1 0 0
chr12:52517659|52517965 hsa-miR-6851-5p 1 0 0
chr12:52517659|52517965 hsa-miR-6751-5p 1 0 0
chr12:52517659|52517965 hsa-miR-6879-5p 1 0 0
chr12:52517659|52517965 hsa-miR-3620-5p 1 0 0
chr12:52517659|52517965 hsa-miR-6846-5p 1 0 0
chr12:52517659|52517965 hsa-miR-6848-5p 1 0 0
chr12:52517659|52517965 hsa-miR-4758-5p 1 0 0
chr12:52517659|52517965 hsa-miR-378a-3p 1 0 0
chr12:52517659|52517965 hsa-miR-6766-5p 1 0 0
chr12:52517659|52517965 hsa-miR-6762-5p 1 0 0
chr12:52517659|52517965 hsa-miR-378d 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr12:52517659|52517965
ORF Type ORF1
Protein Length 35
Nucleotide Length 108
Protein Sequence MRLHLGQLLQGDLESVIWFCVVLFNVSSIQIFHSL
Nucleotide Sequence ATGCGTCTGCATCTGGGACAGCTCCTGCAGGGAGATTTGGAGTCGGTCATCTGGTTCTGTGTTGTGTTATTTAATGTCAGTTCCATTCAAATCTTTCACTCATTGTGA
CircID chr12:52517659|52517965
ORF Type ORF2
Protein Length 61
Nucleotide Length 186
Protein Sequence MMLSRSRLRLLSMERTTEVSETCVCIWDSSCREIWSRSSGSVLCYLMSVPFKSFTHCDMTT
Nucleotide Sequence ATGATGCTATCCAGGTCCAGGTTGCGGTTGTTGTCCATGGAGAGGACCACTGAGGTGTCAGAGACATGCGTCTGCATCTGGGACAGCTCCTGCAGGGAGATTTGGAGTCGGTCATCTGGTTCTGTGTTGTGTTATTTAATGTCAGTTCCATTCAAATCTTTCACTCATTGTGATATGACAACTTGA
CircID chr12:52517659|52517965
ORF Type ORF3
Protein Length 29
Nucleotide Length 90
Protein Sequence MRCQRHASASGTAPAGRFGVGHLVLCCVI
Nucleotide Sequence CTGAGGTGTCAGAGACATGCGTCTGCATCTGGGACAGCTCCTGCAGGGAGATTTGGAGTCGGTCATCTGGTTCTGTGTTGTGTTATTTAA
CircID chr12:52517659|52517965
ORF Type ORF4
Protein Length 50
Nucleotide Length 153
Protein Sequence MEAKVDALMDEINFMKMFFDAVRNLSKFFTWVGFFSSSCHITMSERFEWN
Nucleotide Sequence CTGGAGGCCAAGGTTGATGCACTGATGGATGAGATTAACTTCATGAAGATGTTCTTTGATGCGGTAAGAAACTTATCTAAATTTTTCACATGGGTGGGTTTTTTTTCCTCAAGTTGTCATATCACAATGAGTGAAAGATTTGAATGGAACTGA
CircID chr12:52517659|52517965
ORF Type ORF5
Protein Length 34
Nucleotide Length 102
Protein Sequence MQELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAE
Nucleotide Sequence CTGCAGGAGCTGTCCCAGATGCAGACGCATGTCTCTGACACCTCAGTGGTCCTCTCCATGGACAACAACCGCAACCTGGACCTGGATAGCATCATCGCTGAG
CircID chr12:52517659|52517965
ORF Type ORF6
Protein Length 52
Nucleotide Length 156
Protein Sequence MELTLNNTTQNQMTDSKSPCRSCPRCRRMSLTPQWSSPWTTTATWTWIASSL
Nucleotide Sequence ATGGAACTGACATTAAATAACACAACACAGAACCAGATGACCGACTCCAAATCTCCCTGCAGGAGCTGTCCCAGATGCAGACGCATGTCTCTGACACCTCAGTGGTCCTCTCCATGGACAACAACCGCAACCTGGACCTGGATAGCATCATCGCTG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab