CircRNA Information

General Information
circRNA Basic Information
CircID chr12:52517659|52518126
Strand -
CircType exon
Host Gene ENSG00000186081.10;
Algorism CIRI2;
Sequence CTCAGCGATGATGCTATCCAGGTCCAGGTTGCGGTTGTTGTCCATGGAGAGGACCACTGAGGTGTCAGAGACATGCGTCTGCATCTGGGACAGCTCCTGCAGGGAGATTTGGAGTCGGTCATCTGGTTCTGTGTTGTGTTATTTAATGTCAGTTCCATTCAAATCTTTCACTCATTGTGATATGACAACTTGAGGAAAAAAAACCCACCCATGTGAAAAATTTAGATAAGTTTCTTACCGCATCAAAGAACATCTTCATGAAGTTAATCTCATCCATCAGTGCATCAACCTTGGCCTCCAGCTCCACCTTGTTCATGTAGGCAGCATCTACATCCTTCTTCAGCATCACAAACTCATT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:52517659|52518126 hsa-miR-23a-5p 0 0 1
chr12:52517659|52518126 hsa-miR-23a-3p 0 0 1
chr12:52517659|52518126 hsa-miR-23b-5p 0 0 1
chr12:52517659|52518126 hsa-miR-23b-3p 0 0 1
chr12:52517659|52518126 hsa-miR-136-5p 0 0 1
chr12:52517659|52518126 hsa-miR-136-3p 0 0 1
chr12:52517659|52518126 hsa-miR-382-5p 0 0 1
chr12:52517659|52518126 hsa-miR-382-3p 0 0 1
chr12:52517659|52518126 hsa-miR-433-5p 0 0 1
chr12:52517659|52518126 hsa-miR-433-3p 0 0 1
chr12:52517659|52518126 hsa-miR-492 0 0 1
chr12:52517659|52518126 hsa-miR-593-5p 0 0 1
chr12:52517659|52518126 hsa-miR-593-3p 0 0 1
chr12:52517659|52518126 hsa-miR-619-5p 0 0 1
chr12:52517659|52518126 hsa-miR-619-3p 0 0 1
chr12:52517659|52518126 hsa-miR-624-5p 0 0 1
chr12:52517659|52518126 hsa-miR-624-3p 0 0 1
chr12:52517659|52518126 hsa-miR-629-5p 0 0 1
chr12:52517659|52518126 hsa-miR-629-3p 0 0 1
chr12:52517659|52518126 hsa-miR-631 0 0 1
chr12:52517659|52518126 hsa-miR-650 0 0 1
chr12:52517659|52518126 hsa-miR-658 0 0 1
chr12:52517659|52518126 hsa-miR-758-5p 0 0 1
chr12:52517659|52518126 hsa-miR-758-3p 0 0 1
chr12:52517659|52518126 hsa-miR-708-5p 0 0 1
chr12:52517659|52518126 hsa-miR-708-3p 0 0 1
chr12:52517659|52518126 hsa-miR-1238-5p 0 0 1
chr12:52517659|52518126 hsa-miR-1238-3p 0 0 1
chr12:52517659|52518126 hsa-miR-1205 0 0 1
chr12:52517659|52518126 hsa-miR-1286 0 0 1
chr12:52517659|52518126 hsa-miR-1293 0 0 1
chr12:52517659|52518126 hsa-miR-1255a 0 0 1
chr12:52517659|52518126 hsa-miR-1265 0 0 1
chr12:52517659|52518126 hsa-miR-490-3p 0 0 1
chr12:52517659|52518126 hsa-miR-28-5p 0 0 1
chr12:52517659|52518126 hsa-miR-513a-3p 0 0 1
chr12:52517659|52518126 hsa-miR-1255b 0 0 1
chr12:52517659|52518126 hsa-miR-1308 0 0 1
chr12:52517659|52518126 hsa-miR-768-3p 0 0 1
chr12:52517659|52518126 hsa-miR-637 1 0 0
chr12:52517659|52518126 hsa-miR-663a 1 0 0
chr12:52517659|52518126 hsa-miR-762 1 0 0
chr12:52517659|52518126 hsa-miR-1322 1 0 0
chr12:52517659|52518126 hsa-miR-3132 1 0 0
chr12:52517659|52518126 hsa-miR-378b 1 0 0
chr12:52517659|52518126 hsa-miR-3154 1 0 0
chr12:52517659|52518126 hsa-miR-3185 1 0 0
chr12:52517659|52518126 hsa-miR-378c 1 0 0
chr12:52517659|52518126 hsa-miR-4266 1 0 0
chr12:52517659|52518126 hsa-miR-3652 1 0 0
chr12:52517659|52518126 hsa-miR-3661 1 0 0
chr12:52517659|52518126 hsa-miR-378e 1 0 0
chr12:52517659|52518126 hsa-miR-378f 1 0 0
chr12:52517659|52518126 hsa-miR-378h 1 0 0
chr12:52517659|52518126 hsa-miR-3135b 1 0 0
chr12:52517659|52518126 hsa-miR-4498 1 0 0
chr12:52517659|52518126 hsa-miR-4508 1 0 0
chr12:52517659|52518126 hsa-miR-4533 1 0 0
chr12:52517659|52518126 hsa-miR-1587 1 0 0
chr12:52517659|52518126 hsa-miR-3975 1 0 0
chr12:52517659|52518126 hsa-miR-4651 1 0 0
chr12:52517659|52518126 hsa-miR-4658 1 0 0
chr12:52517659|52518126 hsa-miR-4739 1 0 0
chr12:52517659|52518126 hsa-miR-5683 1 0 0
chr12:52517659|52518126 hsa-miR-6081 1 0 0
chr12:52517659|52518126 hsa-miR-6085 1 0 0
chr12:52517659|52518126 hsa-miR-6165 1 0 0
chr12:52517659|52518126 hsa-miR-6745 1 0 0
chr12:52517659|52518126 hsa-miR-8060 1 0 0
chr12:52517659|52518126 hsa-miR-8089 1 0 0
chr12:52517659|52518126 hsa-miR-9986 1 0 0
chr12:52517659|52518126 hsa-miR-12114 1 0 0
chr12:52517659|52518126 hsa-miR-12115 1 0 0
chr12:52517659|52518126 hsa-miR-12118 1 0 0
chr12:52517659|52518126 hsa-miR-12129 1 0 0
chr12:52517659|52518126 hsa-miR-4731-5p 1 0 0
chr12:52517659|52518126 hsa-miR-6894-5p 1 0 0
chr12:52517659|52518126 hsa-miR-8071 1 0 0
chr12:52517659|52518126 hsa-miR-5187-5p 1 0 0
chr12:52517659|52518126 hsa-miR-6089 1 0 0
chr12:52517659|52518126 hsa-miR-6880-5p 1 0 0
chr12:52517659|52518126 hsa-miR-7847-3p 1 0 0
chr12:52517659|52518126 hsa-miR-6746-5p 1 0 0
chr12:52517659|52518126 hsa-miR-6730-5p 1 0 0
chr12:52517659|52518126 hsa-miR-3151-5p 1 0 0
chr12:52517659|52518126 hsa-miR-6772-5p 1 0 0
chr12:52517659|52518126 hsa-miR-185-3p 1 0 0
chr12:52517659|52518126 hsa-miR-6782-5p 1 0 0
chr12:52517659|52518126 hsa-miR-6874-5p 1 0 0
chr12:52517659|52518126 hsa-miR-5008-5p 1 0 0
chr12:52517659|52518126 hsa-miR-6786-5p 1 0 0
chr12:52517659|52518126 hsa-miR-6740-5p 1 0 0
chr12:52517659|52518126 hsa-miR-4764-5p 1 0 0
chr12:52517659|52518126 hsa-miR-4717-3p 1 0 0
chr12:52517659|52518126 hsa-miR-3690 1 0 0
chr12:52517659|52518126 hsa-miR-6781-5p 1 0 0
chr12:52517659|52518126 hsa-miR-516b-5p 1 0 0
chr12:52517659|52518126 hsa-miR-4776-5p 1 0 0
chr12:52517659|52518126 hsa-miR-1250-5p 1 0 0
chr12:52517659|52518126 hsa-miR-744-5p 1 0 0
chr12:52517659|52518126 hsa-miR-6510-3p 1 0 0
chr12:52517659|52518126 hsa-miR-1233-5p 1 0 0
chr12:52517659|52518126 hsa-miR-6769b-5p 1 0 0
chr12:52517659|52518126 hsa-miR-6812-5p 1 0 0
chr12:52517659|52518126 hsa-miR-6865-5p 1 0 0
chr12:52517659|52518126 hsa-miR-5001-5p 1 0 0
chr12:52517659|52518126 hsa-miR-6726-5p 1 0 0
chr12:52517659|52518126 hsa-miR-6754-5p 1 0 0
chr12:52517659|52518126 hsa-miR-6756-5p 1 0 0
chr12:52517659|52518126 hsa-miR-6803-5p 1 0 0
chr12:52517659|52518126 hsa-miR-6813-5p 1 0 0
chr12:52517659|52518126 hsa-miR-6815-5p 1 0 0
chr12:52517659|52518126 hsa-miR-6842-5p 1 0 0
chr12:52517659|52518126 hsa-miR-6851-5p 1 0 0
chr12:52517659|52518126 hsa-miR-6751-5p 1 0 0
chr12:52517659|52518126 hsa-miR-6879-5p 1 0 0
chr12:52517659|52518126 hsa-miR-3620-5p 1 0 0
chr12:52517659|52518126 hsa-miR-10396a-5p 1 0 0
chr12:52517659|52518126 hsa-miR-10396b-5p 1 0 0
chr12:52517659|52518126 hsa-miR-4701-3p 1 0 0
chr12:52517659|52518126 hsa-miR-675-5p 1 0 0
chr12:52517659|52518126 hsa-miR-6846-5p 1 0 0
chr12:52517659|52518126 hsa-miR-6848-5p 1 0 0
chr12:52517659|52518126 hsa-miR-6831-5p 1 0 0
chr12:52517659|52518126 hsa-miR-939-5p 1 0 0
chr12:52517659|52518126 hsa-miR-4758-5p 1 0 0
chr12:52517659|52518126 hsa-miR-3173-3p 1 0 0
chr12:52517659|52518126 hsa-miR-378a-3p 1 0 0
chr12:52517659|52518126 hsa-miR-6766-5p 1 0 0
chr12:52517659|52518126 hsa-miR-6762-5p 1 0 0
chr12:52517659|52518126 hsa-miR-6884-5p 1 0 0
chr12:52517659|52518126 hsa-miR-378d 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr12:52517659|52518126
ORF Type ORF1
Protein Length 35
Nucleotide Length 108
Protein Sequence MRLHLGQLLQGDLESVIWFCVVLFNVSSIQIFHSL
Nucleotide Sequence ATGCGTCTGCATCTGGGACAGCTCCTGCAGGGAGATTTGGAGTCGGTCATCTGGTTCTGTGTTGTGTTATTTAATGTCAGTTCCATTCAAATCTTTCACTCATTGTGA

CircID chr12:52517659|52518126
ORF Type ORF2
Protein Length 61
Nucleotide Length 186
Protein Sequence MMLSRSRLRLLSMERTTEVSETCVCIWDSSCREIWSRSSGSVLCYLMSVPFKSFTHCDMTT
Nucleotide Sequence ATGATGCTATCCAGGTCCAGGTTGCGGTTGTTGTCCATGGAGAGGACCACTGAGGTGTCAGAGACATGCGTCTGCATCTGGGACAGCTCCTGCAGGGAGATTTGGAGTCGGTCATCTGGTTCTGTGTTGTGTTATTTAATGTCAGTTCCATTCAAATCTTTCACTCATTGTGATATGACAACTTGA

CircID chr12:52517659|52518126
ORF Type ORF3
Protein Length 29
Nucleotide Length 90
Protein Sequence MRCQRHASASGTAPAGRFGVGHLVLCCVI
Nucleotide Sequence CTGAGGTGTCAGAGACATGCGTCTGCATCTGGGACAGCTCCTGCAGGGAGATTTGGAGTCGGTCATCTGGTTCTGTGTTGTGTTATTTAA

CircID chr12:52517659|52518126
ORF Type ORF4
Protein Length 65
Nucleotide Length 198
Protein Sequence MLKKDVDAAYMNKVELEAKVDALMDEINFMKMFFDAVRNLSKFFTWVGFFSSSCHITMSERFEWN
Nucleotide Sequence ATGCTGAAGAAGGATGTAGATGCTGCCTACATGAACAAGGTGGAGCTGGAGGCCAAGGTTGATGCACTGATGGATGAGATTAACTTCATGAAGATGTTCTTTGATGCGGTAAGAAACTTATCTAAATTTTTCACATGGGTGGGTTTTTTTTCCTCAAGTTGTCATATCACAATGAGTGAAAGATTTGAATGGAACTGA

CircID chr12:52517659|52518126
ORF Type ORF5
Protein Length 34
Nucleotide Length 102
Protein Sequence MQELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAE
Nucleotide Sequence CTGCAGGAGCTGTCCCAGATGCAGACGCATGTCTCTGACACCTCAGTGGTCCTCTCCATGGACAACAACCGCAACCTGGACCTGGATAGCATCATCGCTGAG

CircID chr12:52517659|52518126
ORF Type ORF6
Protein Length 52
Nucleotide Length 156
Protein Sequence MELTLNNTTQNQMTDSKSPCRSCPRCRRMSLTPQWSSPWTTTATWTWIASSL
Nucleotide Sequence ATGGAACTGACATTAAATAACACAACACAGAACCAGATGACCGACTCCAAATCTCCCTGCAGGAGCTGTCCCAGATGCAGACGCATGTCTCTGACACCTCAGTGGTCCTCTCCATGGACAACAACCGCAACCTGGACCTGGATAGCATCATCGCTG

CircID chr12:52517659|52518126
ORF Type ORF1
Protein Length 48
Nucleotide Length 144
Protein Sequence MRLHLGQLRIKEHLHEVNLIHQCINLGLQLHLVHVGSIYILLQHHKLI
Nucleotide Sequence ATGCGTCTGCATCTGGGACAGCTCCGCATCAAAGAACATCTTCATGAAGTTAATCTCATCCATCAGTGCATCAACCTTGGCCTCCAGCTCCACCTTGTTCATGTAGGCAGCATCTACATCCTTCTTCAGCATCACAAACTCATT

CircID chr12:52517659|52518126
ORF Type ORF2
Protein Length 56
Nucleotide Length 171
Protein Sequence MMLSRSRLRLLSMERTTEVSETCVCIWDSSASKNIFMKLISSISASTLASSSTLFM
Nucleotide Sequence ATGATGCTATCCAGGTCCAGGTTGCGGTTGTTGTCCATGGAGAGGACCACTGAGGTGTCAGAGACATGCGTCTGCATCTGGGACAGCTCCGCATCAAAGAACATCTTCATGAAGTTAATCTCATCCATCAGTGCATCAACCTTGGCCTCCAGCTCCACCTTGTTCATGTAG

CircID chr12:52517659|52518126
ORF Type ORF3
Protein Length 68
Nucleotide Length 204
Protein Sequence MLKKDVDAAYMNKVELEAKVDALMDEINFMKMFFDAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAE
Nucleotide Sequence ATGCTGAAGAAGGATGTAGATGCTGCCTACATGAACAAGGTGGAGCTGGAGGCCAAGGTTGATGCACTGATGGATGAGATTAACTTCATGAAGATGTTCTTTGATGCGGAGCTGTCCCAGATGCAGACGCATGTCTCTGACACCTCAGTGGTCCTCTCCATGGACAACAACCGCAACCTGGACCTGGATAGCATCATCGCTGAG

CircID chr12:52517659|52518126
ORF Type ORF4
Protein Length 34
Nucleotide Length 102
Protein Sequence MMRSCPRCRRMSLTPQWSSPWTTTATWTWIASSL
Nucleotide Sequence TTGATGCGGAGCTGTCCCAGATGCAGACGCATGTCTCTGACACCTCAGTGGTCCTCTCCATGGACAACAACCGCAACCTGGACCTGGATAGCATCATCGCTG

CircID chr12:52517659|52518126
ORF Type ORF1
Protein Length 44
Nucleotide Length 132
Protein Sequence MRLHRIKEHLHEVNLIHQCINLGLQLHLVHVGSIYILLQHHKLI
Nucleotide Sequence ATGCGTCTGCATCGCATCAAAGAACATCTTCATGAAGTTAATCTCATCCATCAGTGCATCAACCTTGGCCTCCAGCTCCACCTTGTTCATGTAGGCAGCATCTACATCCTTCTTCAGCATCACAAACTCATT

CircID chr12:52517659|52518126
ORF Type ORF2
Protein Length 52
Nucleotide Length 159
Protein Sequence MMLSRSRLRLLSMERTTEVSETCVCIASKNIFMKLISSISASTLASSSTLFM
Nucleotide Sequence ATGATGCTATCCAGGTCCAGGTTGCGGTTGTTGTCCATGGAGAGGACCACTGAGGTGTCAGAGACATGCGTCTGCATCGCATCAAAGAACATCTTCATGAAGTTAATCTCATCCATCAGTGCATCAACCTTGGCCTCCAGCTCCACCTTGTTCATGTAG

CircID chr12:52517659|52518126
ORF Type ORF3
Protein Length 64
Nucleotide Length 192
Protein Sequence MLKKDVDAAYMNKVELEAKVDALMDEINFMKMFFDAMQTHVSDTSVVLSMDNNRNLDLDSIIAE
Nucleotide Sequence ATGCTGAAGAAGGATGTAGATGCTGCCTACATGAACAAGGTGGAGCTGGAGGCCAAGGTTGATGCACTGATGGATGAGATTAACTTCATGAAGATGTTCTTTGATGCGATGCAGACGCATGTCTCTGACACCTCAGTGGTCCTCTCCATGGACAACAACCGCAACCTGGACCTGGATAGCATCATCGCTGAG

CircID chr12:52517659|52518126
ORF Type ORF4
Protein Length 30
Nucleotide Length 90
Protein Sequence MMRCRRMSLTPQWSSPWTTTATWTWIASSL
Nucleotide Sequence TTGATGCGATGCAGACGCATGTCTCTGACACCTCAGTGGTCCTCTCCATGGACAACAACCGCAACCTGGACCTGGATAGCATCATCGCTG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites