CircRNA Information

General Information
circRNA Basic Information
CircID chr12:52897354|52897503
Strand -
CircType exon
Host Gene ENSG00000170421.10;
Algorism CIRI2;
Sequence CCTGCATAGCGGCCTCCTTCCCAGGCTCTGGGGCAGCGCAGGAGGGGTAGGCTGGGAGGGGCTGCCGCAGCTGTTCACTTGGGCAGGACGTCAGAGGACTCAGACACCAGCTTCCCATCACGTGTCTCGATCTTCTTCACAACCACGGCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:52897354|52897503 hsa-miR-661 0 0 1
chr12:52897354|52897503 hsa-miR-324-3p 0 0 1
chr12:52897354|52897503 hsa-miR-138 0 0 1
chr12:52897354|52897503 hsa-miR-453 0 0 1
chr12:52897354|52897503 hsa-miR-346 1 0 0
chr12:52897354|52897503 hsa-miR-924 1 1 0
chr12:52897354|52897503 hsa-miR-1470 1 0 0
chr12:52897354|52897503 hsa-miR-1539 1 1 0
chr12:52897354|52897503 hsa-miR-1913 1 1 0
chr12:52897354|52897503 hsa-miR-1976 0 1 0
chr12:52897354|52897503 hsa-miR-320e 0 1 0
chr12:52897354|52897503 hsa-miR-3909 0 1 0
chr12:52897354|52897503 hsa-miR-4533 0 1 0
chr12:52897354|52897503 hsa-miR-7977 0 1 0
chr12:52897354|52897503 hsa-miR-138-5p 0 1 0
chr12:52897354|52897503 hsa-miR-6749-3p 1 0 0
chr12:52897354|52897503 hsa-miR-4726-3p 1 0 0
chr12:52897354|52897503 hsa-miR-6892-3p 1 0 0
chr12:52897354|52897503 hsa-miR-6881-3p 1 1 0
chr12:52897354|52897503 hsa-miR-6849-3p 0 1 0
chr12:52897354|52897503 hsa-miR-1915-5p 1 0 0
chr12:52897354|52897503 hsa-miR-6882-3p 1 0 0
chr12:52897354|52897503 hsa-miR-7109-3p 1 0 0
chr12:52897354|52897503 hsa-miR-4763-5p 1 0 0
chr12:52897354|52897503 hsa-miR-204-3p 0 1 0
chr12:52897354|52897503 hsa-miR-7113-3p 1 0 0
chr12:52897354|52897503 hsa-miR-6780a-3p 0 1 0
chr12:52897354|52897503 hsa-miR-4667-3p 0 1 0
chr12:52897354|52897503 hsa-miR-6736-3p 0 1 0
chr12:52897354|52897503 hsa-miR-6769a-3p 1 1 0
chr12:52897354|52897503 hsa-miR-660-3p 0 1 0
chr12:52897354|52897503 hsa-miR-6887-3p 0 1 0
chr12:52897354|52897503 hsa-miR-6886-3p 1 0 0
chr12:52897354|52897503 hsa-miR-4749-3p 1 1 0
chr12:52897354|52897503 hsa-miR-1249-3p 1 0 0
chr12:52897354|52897503 hsa-miR-6800-3p 1 0 0
chr12:52897354|52897503 hsa-miR-3162-3p 1 0 0
chr12:52897354|52897503 hsa-miR-6726-5p 0 1 0
chr12:52897354|52897503 hsa-miR-7107-5p 1 0 0
chr12:52897354|52897503 hsa-miR-3127-3p 1 0 0
chr12:52897354|52897503 hsa-miR-4685-5p 0 1 0
chr12:52897354|52897503 hsa-miR-939-5p 0 1 0
chr12:52897354|52897503 hsa-miR-5008-3p 1 1 0
chr12:52897354|52897503 hsa-miR-3173-3p 0 1 0
chr12:52897354|52897503 hsa-miR-4646-5p 0 1 0
chr12:52897354|52897503 hsa-miR-4747-5p 0 1 0
chr12:52897354|52897503 hsa-miR-4722-3p 1 0 0
chr12:52897354|52897503 hsa-miR-6756-3p 1 1 0
chr12:52897354|52897503 hsa-miR-6784-3p 1 0 0
chr12:52897354|52897503 hsa-miR-6862-3p 1 0 0
chr12:52897354|52897503 hsa-miR-10392-3p 1 0 0
chr12:52897354|52897503 hsa-miR-6823-3p 1 0 0
chr12:52897354|52897503 hsa-miR-6764-5p 0 1 0
chr12:52897354|52897503 hsa-miR-301a-5p 0 1 0
chr12:52897354|52897503 hsa-miR-301b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr12:52897354|52897503
ORF Type ORF1
Protein Length 41
Nucleotide Length 123
Protein Sequence MGQRRRGRLGGAAAAVHLGRTSEDSDTSFPSRVSIFFTTTA
Nucleotide Sequence CTGGGGCAGCGCAGGAGGGGTAGGCTGGGAGGGGCTGCCGCAGCTGTTCACTTGGGCAGGACGTCAGAGGACTCAGACACCAGCTTCCCATCACGTGTCTCGATCTTCTTCACAACCACGGCC

CircID chr12:52897354|52897503
ORF Type ORF2
Protein Length 49
Nucleotide Length 147
Protein Sequence LHSGLLPRLWGSAGGVGWEGLPQLFTWAGRQRTQTPASHHVSRSSSQPR
Nucleotide Sequence CTGCATAGCGGCCTCCTTCCCAGGCTCTGGGGCAGCGCAGGAGGGGTAGGCTGGGAGGGGCTGCCGCAGCTGTTCACTTGGGCAGGACGTCAGAGGACTCAGACACCAGCTTCCCATCACGTGTCTCGATCTTCTTCACAACCACGG

CircID chr12:52897354|52897503
ORF Type ORF3
Protein Length 39
Nucleotide Length 117
Protein Sequence MGSWCLSPLTSCPSEQLRQPLPAYPSCAAPEPGKEAAMQ
Nucleotide Sequence ATGGGAAGCTGGTGTCTGAGTCCTCTGACGTCCTGCCCAAGTGAACAGCTGCGGCAGCCCCTCCCAGCCTACCCCTCCTGCGCTGCCCCAGAGCCTGGGAAGGAGGCCGCTATGCAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites