CircRNA Information

General Information
circRNA Basic Information
CircID chr12:52951799|52952181
Strand -
CircType exon
Host Gene ENSG00000111057.9;
Algorism CIRI2;
Sequence AGAGCTGAGACGTACAGTCCAGTCCTTGGAGATCGACCTGGACTCCATGAGAAATCTGGTGAGTGCCTTCACATCACCTGCCCAGCTCCTCCTTCACTTGGCCTCAGACCCAACCCTGTCTCAACCCAAATCCTATCCCTCATATCATGAGTTCCTTTAGCTCAGAAAGAGTCAGTTTCCTCTTTGCATTTCCCTCCACTCCTATCCCTTATCCCAGTACTTGGCACATAGCAGGTGCCCAAAAAAGTTTCCAAAAGTGAAGGGATGAGCAGTCCTGGGACTCTGGGCTCACCCTGCCCCTCCTCTCTGTGCCCCTGCAGAAGGCCAGCTTGGAGAACAGCCTGAGGGAGGTGGAGGCCCGCTACGCCCTACAGATGGAGCAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:52951799|52952181 hsa-miR-345-5p 0 0 1
chr12:52951799|52952181 hsa-miR-345-3p 0 0 1
chr12:52951799|52952181 hsa-miR-422a 0 1 1
chr12:52951799|52952181 hsa-miR-433-5p 0 0 1
chr12:52951799|52952181 hsa-miR-433-3p 0 0 1
chr12:52951799|52952181 hsa-miR-484 0 0 1
chr12:52951799|52952181 hsa-miR-527 0 1 1
chr12:52951799|52952181 hsa-miR-506-5p 0 0 1
chr12:52951799|52952181 hsa-miR-506-3p 0 0 1
chr12:52951799|52952181 hsa-miR-583 0 1 1
chr12:52951799|52952181 hsa-miR-585-5p 0 0 1
chr12:52951799|52952181 hsa-miR-585-3p 0 0 1
chr12:52951799|52952181 hsa-miR-610 0 0 1
chr12:52951799|52952181 hsa-miR-612 0 1 1
chr12:52951799|52952181 hsa-miR-765 1 1 1
chr12:52951799|52952181 hsa-miR-708-5p 0 0 1
chr12:52951799|52952181 hsa-miR-708-3p 0 0 1
chr12:52951799|52952181 hsa-miR-190b-5p 0 0 1
chr12:52951799|52952181 hsa-miR-190b-3p 0 0 1
chr12:52951799|52952181 hsa-miR-1226-5p 0 0 1
chr12:52951799|52952181 hsa-miR-1226-3p 0 0 1
chr12:52951799|52952181 hsa-miR-1227-5p 0 0 1
chr12:52951799|52952181 hsa-miR-1227-3p 0 0 1
chr12:52951799|52952181 hsa-miR-1237-5p 0 0 1
chr12:52951799|52952181 hsa-miR-1237-3p 0 0 1
chr12:52951799|52952181 hsa-miR-1205 0 0 1
chr12:52951799|52952181 hsa-miR-1278 0 0 1
chr12:52951799|52952181 hsa-miR-1288-5p 0 0 1
chr12:52951799|52952181 hsa-miR-1288-3p 0 0 1
chr12:52951799|52952181 hsa-miR-1252-5p 0 0 1
chr12:52951799|52952181 hsa-miR-1252-3p 0 0 1
chr12:52951799|52952181 hsa-miR-125a-3p 0 0 1
chr12:52951799|52952181 hsa-miR-129-5p 0 0 1
chr12:52951799|52952181 hsa-miR-1225-3p 0 0 1
chr12:52951799|52952181 hsa-miR-486-3p 0 1 1
chr12:52951799|52952181 hsa-miR-296-3p 1 1 1
chr12:52951799|52952181 hsa-miR-193a-5p 0 0 1
chr12:52951799|52952181 hsa-miR-1184 0 0 1
chr12:52951799|52952181 hsa-miR-1289 1 1 1
chr12:52951799|52952181 hsa-miR-423-5p 1 1 1
chr12:52951799|52952181 hsa-miR-28-5p 0 0 1
chr12:52951799|52952181 hsa-miR-490-5p 0 0 1
chr12:52951799|52952181 hsa-miR-188-5p 0 1 1
chr12:52951799|52952181 hsa-miR-767-3p 0 1 1
chr12:52951799|52952181 hsa-miR-455-5p 0 0 1
chr12:52951799|52952181 hsa-miR-1207-5p 1 1 1
chr12:52951799|52952181 hsa-miR-518a-5p 0 1 1
chr12:52951799|52952181 hsa-miR-515-5p 0 0 1
chr12:52951799|52952181 hsa-miR-1233 0 0 1
chr12:52951799|52952181 hsa-miR-378 0 0 1
chr12:52951799|52952181 hsa-miR-1269 0 0 1
chr12:52951799|52952181 hsa-miR-124 0 0 1
chr12:52951799|52952181 hsa-miR-1285 0 0 1
chr12:52951799|52952181 hsa-miR-544 0 0 1
chr12:52951799|52952181 hsa-miR-190 0 0 1
chr12:52951799|52952181 hsa-miR-608 1 0 0
chr12:52951799|52952181 hsa-miR-663a 1 0 0
chr12:52951799|52952181 hsa-miR-658 1 0 0
chr12:52951799|52952181 hsa-miR-762 1 0 0
chr12:52951799|52952181 hsa-miR-892b 1 1 0
chr12:52951799|52952181 hsa-miR-1183 1 0 0
chr12:52951799|52952181 hsa-miR-2110 1 0 0
chr12:52951799|52952181 hsa-miR-3125 0 1 0
chr12:52951799|52952181 hsa-miR-3132 1 0 0
chr12:52951799|52952181 hsa-miR-3141 1 0 0
chr12:52951799|52952181 hsa-miR-3147 1 1 0
chr12:52951799|52952181 hsa-miR-3154 1 0 0
chr12:52951799|52952181 hsa-miR-4298 1 0 0
chr12:52951799|52952181 hsa-miR-4303 0 1 0
chr12:52951799|52952181 hsa-miR-4309 0 1 0
chr12:52951799|52952181 hsa-miR-4259 1 1 0
chr12:52951799|52952181 hsa-miR-3916 0 1 0
chr12:52951799|52952181 hsa-miR-3936 1 0 0
chr12:52951799|52952181 hsa-miR-3945 1 0 0
chr12:52951799|52952181 hsa-miR-1268b 1 0 0
chr12:52951799|52952181 hsa-miR-4449 0 1 0
chr12:52951799|52952181 hsa-miR-378h 0 1 0
chr12:52951799|52952181 hsa-miR-4469 0 1 0
chr12:52951799|52952181 hsa-miR-4496 1 1 0
chr12:52951799|52952181 hsa-miR-2392 1 0 0
chr12:52951799|52952181 hsa-miR-4507 1 1 0
chr12:52951799|52952181 hsa-miR-4508 1 0 0
chr12:52951799|52952181 hsa-miR-4510 1 0 0
chr12:52951799|52952181 hsa-miR-4515 1 1 0
chr12:52951799|52952181 hsa-miR-4533 1 0 0
chr12:52951799|52952181 hsa-miR-4534 1 0 0
chr12:52951799|52952181 hsa-miR-3960 1 0 0
chr12:52951799|52952181 hsa-miR-4651 1 0 0
chr12:52951799|52952181 hsa-miR-4656 1 0 0
chr12:52951799|52952181 hsa-miR-4688 0 1 0
chr12:52951799|52952181 hsa-miR-4739 1 1 0
chr12:52951799|52952181 hsa-miR-4779 1 1 0
chr12:52951799|52952181 hsa-miR-5093 1 0 0
chr12:52951799|52952181 hsa-miR-5191 1 1 0
chr12:52951799|52952181 hsa-miR-5194 1 0 0
chr12:52951799|52952181 hsa-miR-5572 1 0 0
chr12:52951799|52952181 hsa-miR-5698 1 0 0
chr12:52951799|52952181 hsa-miR-5787 1 0 0
chr12:52951799|52952181 hsa-miR-6085 1 0 0
chr12:52951799|52952181 hsa-miR-6127 1 0 0
chr12:52951799|52952181 hsa-miR-6129 1 0 0
chr12:52951799|52952181 hsa-miR-6133 1 1 0
chr12:52951799|52952181 hsa-miR-6860 1 1 0
chr12:52951799|52952181 hsa-miR-8089 1 0 0
chr12:52951799|52952181 hsa-miR-12114 1 0 0
chr12:52951799|52952181 hsa-miR-12115 1 1 0
chr12:52951799|52952181 hsa-miR-12118 1 1 0
chr12:52951799|52952181 hsa-miR-12119 1 0 0
chr12:52951799|52952181 hsa-miR-12128 1 0 0
chr12:52951799|52952181 hsa-miR-26b-3p 0 1 0
chr12:52951799|52952181 hsa-miR-4433b-3p 1 1 0
chr12:52951799|52952181 hsa-miR-92a-1-5p 1 1 0
chr12:52951799|52952181 hsa-miR-6734-5p 1 0 0
chr12:52951799|52952181 hsa-miR-6840-3p 0 1 0
chr12:52951799|52952181 hsa-miR-504-3p 1 0 0
chr12:52951799|52952181 hsa-miR-4433a-3p 1 0 0
chr12:52951799|52952181 hsa-miR-6765-5p 1 0 0
chr12:52951799|52952181 hsa-miR-6861-5p 1 0 0
chr12:52951799|52952181 hsa-miR-7106-5p 1 0 0
chr12:52951799|52952181 hsa-miR-6825-5p 0 1 0
chr12:52951799|52952181 hsa-miR-6894-5p 1 0 0
chr12:52951799|52952181 hsa-miR-4687-3p 1 0 0
chr12:52951799|52952181 hsa-miR-6854-5p 0 1 0
chr12:52951799|52952181 hsa-miR-6799-5p 1 0 0
chr12:52951799|52952181 hsa-miR-6510-5p 1 1 0
chr12:52951799|52952181 hsa-miR-6728-5p 1 0 0
chr12:52951799|52952181 hsa-miR-766-5p 1 0 0
chr12:52951799|52952181 hsa-miR-5187-5p 1 1 0
chr12:52951799|52952181 hsa-miR-6515-5p 1 1 0
chr12:52951799|52952181 hsa-miR-6089 1 1 0
chr12:52951799|52952181 hsa-miR-3192-5p 1 0 0
chr12:52951799|52952181 hsa-miR-6757-5p 1 1 0
chr12:52951799|52952181 hsa-miR-6873-5p 1 0 0
chr12:52951799|52952181 hsa-miR-6880-5p 1 0 0
chr12:52951799|52952181 hsa-miR-7847-3p 1 1 0
chr12:52951799|52952181 hsa-miR-4695-5p 1 0 0
chr12:52951799|52952181 hsa-miR-4722-5p 1 0 0
chr12:52951799|52952181 hsa-miR-6890-5p 1 0 0
chr12:52951799|52952181 hsa-miR-3622b-5p 1 0 0
chr12:52951799|52952181 hsa-miR-6721-5p 0 1 0
chr12:52951799|52952181 hsa-miR-197-5p 1 0 0
chr12:52951799|52952181 hsa-miR-3189-5p 1 0 0
chr12:52951799|52952181 hsa-miR-7845-5p 1 0 0
chr12:52951799|52952181 hsa-miR-423-3p 1 0 0
chr12:52951799|52952181 hsa-miR-6871-5p 1 0 0
chr12:52951799|52952181 hsa-miR-6772-5p 1 0 0
chr12:52951799|52952181 hsa-miR-23a-5p 1 0 0
chr12:52951799|52952181 hsa-miR-6798-5p 1 0 0
chr12:52951799|52952181 hsa-miR-6881-5p 1 1 0
chr12:52951799|52952181 hsa-miR-2467-3p 1 0 0
chr12:52951799|52952181 hsa-miR-6782-5p 1 1 0
chr12:52951799|52952181 hsa-miR-6874-5p 1 0 0
chr12:52951799|52952181 hsa-miR-5008-5p 1 0 0
chr12:52951799|52952181 hsa-miR-7109-5p 1 0 0
chr12:52951799|52952181 hsa-miR-6740-5p 1 0 0
chr12:52951799|52952181 hsa-miR-1229-5p 1 1 0
chr12:52951799|52952181 hsa-miR-4640-5p 1 0 0
chr12:52951799|52952181 hsa-miR-6823-5p 1 1 0
chr12:52951799|52952181 hsa-miR-877-5p 1 0 0
chr12:52951799|52952181 hsa-miR-6834-5p 1 1 0
chr12:52951799|52952181 hsa-miR-149-3p 1 0 0
chr12:52951799|52952181 hsa-miR-937-5p 1 0 0
chr12:52951799|52952181 hsa-miR-202-3p 1 0 0
chr12:52951799|52952181 hsa-miR-6824-5p 1 0 0
chr12:52951799|52952181 hsa-miR-3158-5p 1 0 0
chr12:52951799|52952181 hsa-miR-6892-5p 1 1 0
chr12:52951799|52952181 hsa-miR-5584-5p 1 1 0
chr12:52951799|52952181 hsa-miR-664b-5p 1 1 0
chr12:52951799|52952181 hsa-miR-6870-3p 0 1 0
chr12:52951799|52952181 hsa-miR-1304-5p 1 0 0
chr12:52951799|52952181 hsa-miR-6801-5p 1 0 0
chr12:52951799|52952181 hsa-miR-3940-3p 0 1 0
chr12:52951799|52952181 hsa-miR-1296-5p 1 0 0
chr12:52951799|52952181 hsa-miR-605-3p 0 1 0
chr12:52951799|52952181 hsa-miR-4524a-3p 0 1 0
chr12:52951799|52952181 hsa-miR-541-5p 0 1 0
chr12:52951799|52952181 hsa-miR-1233-5p 1 0 0
chr12:52951799|52952181 hsa-miR-4763-3p 1 1 0
chr12:52951799|52952181 hsa-miR-6778-5p 1 0 0
chr12:52951799|52952181 hsa-miR-6812-5p 1 0 0
chr12:52951799|52952181 hsa-miR-6816-5p 1 0 0
chr12:52951799|52952181 hsa-miR-6870-5p 1 0 0
chr12:52951799|52952181 hsa-miR-6893-5p 1 0 0
chr12:52951799|52952181 hsa-miR-6775-5p 0 1 0
chr12:52951799|52952181 hsa-miR-1343-5p 1 0 0
chr12:52951799|52952181 hsa-miR-5001-5p 1 1 0
chr12:52951799|52952181 hsa-miR-6726-5p 1 0 0
chr12:52951799|52952181 hsa-miR-6743-5p 1 1 0
chr12:52951799|52952181 hsa-miR-6756-5p 1 0 0
chr12:52951799|52952181 hsa-miR-6813-5p 1 0 0
chr12:52951799|52952181 hsa-miR-6819-5p 1 0 0
chr12:52951799|52952181 hsa-miR-6842-5p 1 0 0
chr12:52951799|52952181 hsa-miR-6851-5p 1 0 0
chr12:52951799|52952181 hsa-miR-10401-5p 1 0 0
chr12:52951799|52952181 hsa-miR-11181-3p 1 1 0
chr12:52951799|52952181 hsa-miR-1249-5p 1 1 0
chr12:52951799|52952181 hsa-miR-6722-3p 1 1 0
chr12:52951799|52952181 hsa-miR-6779-5p 1 0 0
chr12:52951799|52952181 hsa-miR-6780a-5p 1 0 0
chr12:52951799|52952181 hsa-miR-6797-5p 1 1 0
chr12:52951799|52952181 hsa-miR-6875-5p 1 0 0
chr12:52951799|52952181 hsa-miR-6879-5p 1 0 0
chr12:52951799|52952181 hsa-miR-7111-5p 1 0 0
chr12:52951799|52952181 hsa-miR-6754-3p 0 1 0
chr12:52951799|52952181 hsa-miR-3620-5p 1 0 0
chr12:52951799|52952181 hsa-miR-4728-5p 1 0 0
chr12:52951799|52952181 hsa-miR-5196-5p 1 0 0
chr12:52951799|52952181 hsa-miR-6780b-5p 1 0 0
chr12:52951799|52952181 hsa-miR-10396b-5p 1 0 0
chr12:52951799|52952181 hsa-miR-1909-3p 1 0 0
chr12:52951799|52952181 hsa-miR-328-5p 1 1 0
chr12:52951799|52952181 hsa-miR-4632-5p 0 1 0
chr12:52951799|52952181 hsa-miR-4745-5p 1 0 0
chr12:52951799|52952181 hsa-miR-6738-5p 1 1 0
chr12:52951799|52952181 hsa-miR-6794-5p 1 1 0
chr12:52951799|52952181 hsa-miR-6795-5p 1 0 0
chr12:52951799|52952181 hsa-miR-6848-5p 1 0 0
chr12:52951799|52952181 hsa-miR-6858-5p 1 1 0
chr12:52951799|52952181 hsa-miR-6887-5p 1 1 0
chr12:52951799|52952181 hsa-miR-3187-5p 1 1 0
chr12:52951799|52952181 hsa-miR-6845-5p 1 0 0
chr12:52951799|52952181 hsa-miR-939-5p 1 0 0
chr12:52951799|52952181 hsa-miR-3198 0 1 0
chr12:52951799|52952181 hsa-miR-3940-5p 1 1 0
chr12:52951799|52952181 hsa-miR-6731-5p 1 0 0
chr12:52951799|52952181 hsa-miR-6758-5p 0 1 0
chr12:52951799|52952181 hsa-miR-6856-5p 1 1 0
chr12:52951799|52952181 hsa-miR-1271-3p 0 1 0
chr12:52951799|52952181 hsa-miR-6773-5p 1 0 0
chr12:52951799|52952181 hsa-miR-6855-5p 1 1 0
chr12:52951799|52952181 hsa-miR-3173-3p 1 1 0
chr12:52951799|52952181 hsa-miR-4646-5p 1 0 0
chr12:52951799|52952181 hsa-miR-6891-5p 1 0 0
chr12:52951799|52952181 hsa-miR-4472 1 0 0
chr12:52951799|52952181 hsa-miR-541-3p 0 1 0
chr12:52951799|52952181 hsa-miR-6750-5p 1 0 0
chr12:52951799|52952181 hsa-miR-6849-5p 1 0 0
chr12:52951799|52952181 hsa-miR-6791-5p 1 0 0
chr12:52951799|52952181 hsa-miR-7107-3p 1 0 0
chr12:52951799|52952181 hsa-miR-6762-5p 1 0 0
chr12:52951799|52952181 hsa-miR-4756-5p 1 0 0
chr12:52951799|52952181 hsa-miR-6859-5p 0 1 0
chr12:52951799|52952181 hsa-miR-619-5p 0 1 0
chr12:52951799|52952181 hsa-miR-7156-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr12:52951799|52952181
ORF Type ORF1
Protein Length 26
Nucleotide Length 81
Protein Sequence MSSPGTLGSPCPSSLCPCRRPAWRTA
Nucleotide Sequence ATGAGCAGTCCTGGGACTCTGGGCTCACCCTGCCCCTCCTCTCTGTGCCCCTGCAGAAGGCCAGCTTGGAGAACAGCCTGA

CircID chr12:52951799|52952181
ORF Type ORF2
Protein Length 51
Nucleotide Length 156
Protein Sequence MRRTVQSLEIDLDSMRNLVSAFTSPAQLLLHLASDPTLSQPKSYPSYHEFL
Nucleotide Sequence CTGAGACGTACAGTCCAGTCCTTGGAGATCGACCTGGACTCCATGAGAAATCTGGTGAGTGCCTTCACATCACCTGCCCAGCTCCTCCTTCACTTGGCCTCAGACCCAACCCTGTCTCAACCCAAATCCTATCCCTCATATCATGAGTTCCTTTAG

CircID chr12:52951799|52952181
ORF Type ORF3
Protein Length 36
Nucleotide Length 108
Protein Sequence MGLWAHPAPPLCAPAEGQLGEQPEGGGGPLRPTDGA
Nucleotide Sequence CTGGGACTCTGGGCTCACCCTGCCCCTCCTCTCTGTGCCCCTGCAGAAGGCCAGCTTGGAGAACAGCCTGAGGGAGGTGGAGGCCCGCTACGCCCTACAGATGGAGCA

CircID chr12:52951799|52952181
ORF Type ORF4
Protein Length 60
Nucleotide Length 183
Protein Sequence MPSSSFTWPQTQPCLNPNPIPHIMSSFSSERVSFLFAFPSTPIPYPSTWHIAGAQKSFQK
Nucleotide Sequence CTGCCCAGCTCCTCCTTCACTTGGCCTCAGACCCAACCCTGTCTCAACCCAAATCCTATCCCTCATATCATGAGTTCCTTTAGCTCAGAAAGAGTCAGTTTCCTCTTTGCATTTCCCTCCACTCCTATCCCTTATCCCAGTACTTGGCACATAGCAGGTGCCCAAAAAAGTTTCCAAAAGTGA

CircID chr12:52951799|52952181
ORF Type ORF5
Protein Length 30
Nucleotide Length 90
Protein Sequence MPLLSVPLQKASLENSLREVEARYALQMEQ
Nucleotide Sequence CTGCCCCTCCTCTCTGTGCCCCTGCAGAAGGCCAGCTTGGAGAACAGCCTGAGGGAGGTGGAGGCCCGCTACGCCCTACAGATGGAGCAG

CircID chr12:52951799|52952181
ORF Type ORF6
Protein Length 52
Nucleotide Length 159
Protein Sequence MQGHREEGQGEPRVPGLLIPSLLETFLGTCYVPSTGIRDRSGGKCKEETDSF
Nucleotide Sequence CTGCAGGGGCACAGAGAGGAGGGGCAGGGTGAGCCCAGAGTCCCAGGACTGCTCATCCCTTCACTTTTGGAAACTTTTTTGGGCACCTGCTATGTGCCAAGTACTGGGATAAGGGATAGGAGTGGAGGGAAATGCAAAGAGGAAACTGACTCTTTCTGA

CircID chr12:52951799|52952181
ORF Type ORF7
Protein Length 43
Nucleotide Length 132
Protein Sequence MFSKLAFCRGTERRGRVSPESQDCSSLHFWKLFWAPAMCQVLG
Nucleotide Sequence CTGTTCTCCAAGCTGGCCTTCTGCAGGGGCACAGAGAGGAGGGGCAGGGTGAGCCCAGAGTCCCAGGACTGCTCATCCCTTCACTTTTGGAAACTTTTTTGGGCACCTGCTATGTGCCAAGTACTGGGATAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites