CircNet

General Information

circRNA Basic Information

CircID	chr12:53467960\|53468126
Strand	+
CircType	exon
Host Gene	ENSG00000197111.14;
Algorism	CIRI2;
Sequence	CCGTACCCATCTTTAACAACACCTGGACTGAACCAGGCCAGCTGGCTAACACTCAAGCTTAGTCCTGATCTCAGCTATGGCTGCTGTCTCATCATTTTTAGAAGGGGGTTGGCCAGATCCATCAAGGGACCCTCGGGGGCTCCAGGCCCACCCCTTTGCTCTCTCAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr12:53467960\|53468126	hsa-miR-575	0	0	1
chr12:53467960\|53468126	hsa-miR-608	0	1	1
chr12:53467960\|53468126	hsa-miR-623	0	1	1
chr12:53467960\|53468126	hsa-miR-541-5p	0	0	1
chr12:53467960\|53468126	hsa-miR-541-3p	0	0	1
chr12:53467960\|53468126	hsa-miR-1272	0	1	1
chr12:53467960\|53468126	hsa-miR-1225-3p	1	1	1
chr12:53467960\|53468126	hsa-miR-574-5p	0	0	1
chr12:53467960\|53468126	hsa-miR-1225-5p	0	1	1
chr12:53467960\|53468126	hsa-miR-654-5p	0	1	1
chr12:53467960\|53468126	hsa-miR-1207-3p	0	1	1
chr12:53467960\|53468126	hsa-miR-455-3p	0	0	1
chr12:53467960\|53468126	hsa-miR-548c-3p	0	0	1
chr12:53467960\|53468126	hsa-miR-1254	0	0	1
chr12:53467960\|53468126	hsa-miR-650	1	0	0
chr12:53467960\|53468126	hsa-miR-1182	0	1	0
chr12:53467960\|53468126	hsa-miR-3176	0	1	0
chr12:53467960\|53468126	hsa-miR-4254	0	1	0
chr12:53467960\|53468126	hsa-miR-3659	0	1	0
chr12:53467960\|53468126	hsa-miR-3662	0	1	0
chr12:53467960\|53468126	hsa-miR-3943	0	1	0
chr12:53467960\|53468126	hsa-miR-4651	0	1	0
chr12:53467960\|53468126	hsa-miR-4656	1	0	0
chr12:53467960\|53468126	hsa-miR-125a-3p	1	0	0
chr12:53467960\|53468126	hsa-miR-4695-5p	1	0	0
chr12:53467960\|53468126	hsa-miR-7160-5p	1	1	0
chr12:53467960\|53468126	hsa-miR-6782-5p	0	1	0
chr12:53467960\|53468126	hsa-miR-4783-3p	1	0	0
chr12:53467960\|53468126	hsa-miR-6749-5p	1	0	0
chr12:53467960\|53468126	hsa-miR-4715-5p	1	0	0
chr12:53467960\|53468126	hsa-miR-3190-5p	0	1	0
chr12:53467960\|53468126	hsa-miR-6761-5p	0	1	0
chr12:53467960\|53468126	hsa-miR-4524a-3p	0	1	0
chr12:53467960\|53468126	hsa-miR-6756-5p	0	1	0
chr12:53467960\|53468126	hsa-miR-6769a-5p	0	1	0
chr12:53467960\|53468126	hsa-miR-3127-3p	0	1	0
chr12:53467960\|53468126	hsa-miR-4685-5p	1	0	0
chr12:53467960\|53468126	hsa-miR-1238-5p	1	0	0
chr12:53467960\|53468126	hsa-miR-4758-5p	1	0	0
chr12:53467960\|53468126	hsa-miR-3116	0	1	0
chr12:53467960\|53468126	hsa-miR-6790-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr12:53467960\|53468126
ORF Type	ORF1
Protein Length	46
Nucleotide Length	138
Protein Sequence	MNQASWLTLKLSPDLSYGCCLIIFRRGLARSIKGPSGAPGPPLCSL
Nucleotide Sequence	CTGAACCAGGCCAGCTGGCTAACACTCAAGCTTAGTCCTGATCTCAGCTATGGCTGCTGTCTCATCATTTTTAGAAGGGGGTTGGCCAGATCCATCAAGGGACCCTCGGGGGCTCCAGGCCCACCCCTTTGCTCTCTC

CircID	chr12:53467960\|53468126
ORF Type	ORF2
Protein Length	34
Nucleotide Length	102
Protein Sequence	MISAMAAVSSFLEGGWPDPSRDPRGLQAHPFALS
Nucleotide Sequence	CTGATCTCAGCTATGGCTGCTGTCTCATCATTTTTAGAAGGGGGTTGGCCAGATCCATCAAGGGACCCTCGGGGGCTCCAGGCCCACCCCTTTGCTCTCTCA

CircID	chr12:53467960\|53468126
ORF Type	ORF3
Protein Length	30
Nucleotide Length	93
Protein Sequence	LREQRGGPGAPEGPLMDLANPLLKMMRQQP
Nucleotide Sequence	CTGAGAGAGCAAAGGGGTGGGCCTGGAGCCCCCGAGGGTCCCTTGATGGATCTGGCCAACCCCCTTCTAAAAATGATGAGACAGCAGCCATAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information