CircRNA Information

General Information
circRNA Basic Information
CircID chr12:53474936|53475086
Strand -
CircType exon
Host Gene ENSG00000197111.14;
Algorism CIRI2;
Sequence CTCTCTCAACCCTCCACCCCTTCTTCTTCTTCCTCCTCCACCACCACCCCCTCGCTCGCCACAGCGGGGACCTCCGACGCACCCTCCAGCCTCCCCAACCCTCTTCCGACCGCCCCTTGTGTCTCCAGTCTGCTTGGCATGAAACCCATCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:53474936|53475086 hsa-miR-608 1 1 1
chr12:53474936|53475086 hsa-miR-629-5p 0 0 1
chr12:53474936|53475086 hsa-miR-629-3p 0 0 1
chr12:53474936|53475086 hsa-miR-765 1 1 1
chr12:53474936|53475086 hsa-miR-939-5p 0 0 1
chr12:53474936|53475086 hsa-miR-939-3p 0 0 1
chr12:53474936|53475086 hsa-miR-1293 1 1 1
chr12:53474936|53475086 hsa-miR-296-3p 1 1 1
chr12:53474936|53475086 hsa-miR-485-5p 1 0 1
chr12:53474936|53475086 hsa-miR-876-3p 0 0 1
chr12:53474936|53475086 hsa-miR-323-5p 0 0 1
chr12:53474936|53475086 hsa-miR-184 1 0 0
chr12:53474936|53475086 hsa-miR-637 1 0 0
chr12:53474936|53475086 hsa-miR-663a 1 0 0
chr12:53474936|53475086 hsa-miR-658 1 0 0
chr12:53474936|53475086 hsa-miR-762 1 0 0
chr12:53474936|53475086 hsa-miR-1268a 1 0 0
chr12:53474936|53475086 hsa-miR-1270 1 0 0
chr12:53474936|53475086 hsa-miR-1275 1 0 0
chr12:53474936|53475086 hsa-miR-2110 1 0 0
chr12:53474936|53475086 hsa-miR-2861 1 0 0
chr12:53474936|53475086 hsa-miR-3122 1 0 0
chr12:53474936|53475086 hsa-miR-3125 1 1 0
chr12:53474936|53475086 hsa-miR-3147 1 1 0
chr12:53474936|53475086 hsa-miR-3154 1 1 0
chr12:53474936|53475086 hsa-miR-3175 1 0 0
chr12:53474936|53475086 hsa-miR-3178 1 0 0
chr12:53474936|53475086 hsa-miR-3185 1 1 0
chr12:53474936|53475086 hsa-miR-3188 1 0 0
chr12:53474936|53475086 hsa-miR-3196 1 0 0
chr12:53474936|53475086 hsa-miR-4299 1 0 0
chr12:53474936|53475086 hsa-miR-4260 1 0 0
chr12:53474936|53475086 hsa-miR-4271 1 0 0
chr12:53474936|53475086 hsa-miR-3652 1 1 0
chr12:53474936|53475086 hsa-miR-3916 1 0 0
chr12:53474936|53475086 hsa-miR-3936 1 1 0
chr12:53474936|53475086 hsa-miR-1268b 1 1 0
chr12:53474936|53475086 hsa-miR-4428 1 0 0
chr12:53474936|53475086 hsa-miR-4430 1 1 0
chr12:53474936|53475086 hsa-miR-4458 1 0 0
chr12:53474936|53475086 hsa-miR-3135b 1 1 0
chr12:53474936|53475086 hsa-miR-4463 1 0 0
chr12:53474936|53475086 hsa-miR-4466 1 0 0
chr12:53474936|53475086 hsa-miR-4467 1 0 0
chr12:53474936|53475086 hsa-miR-4476 1 0 0
chr12:53474936|53475086 hsa-miR-4483 1 0 0
chr12:53474936|53475086 hsa-miR-4488 1 0 0
chr12:53474936|53475086 hsa-miR-4498 1 0 0
chr12:53474936|53475086 hsa-miR-4506 1 0 0
chr12:53474936|53475086 hsa-miR-2392 1 0 0
chr12:53474936|53475086 hsa-miR-4507 1 0 0
chr12:53474936|53475086 hsa-miR-4508 1 0 0
chr12:53474936|53475086 hsa-miR-4510 1 0 0
chr12:53474936|53475086 hsa-miR-4516 1 0 0
chr12:53474936|53475086 hsa-miR-4533 1 0 0
chr12:53474936|53475086 hsa-miR-4534 1 0 0
chr12:53474936|53475086 hsa-miR-1587 1 0 0
chr12:53474936|53475086 hsa-miR-4644 1 0 0
chr12:53474936|53475086 hsa-miR-4651 1 1 0
chr12:53474936|53475086 hsa-miR-4688 1 0 0
chr12:53474936|53475086 hsa-miR-4706 1 0 0
chr12:53474936|53475086 hsa-miR-4710 1 0 0
chr12:53474936|53475086 hsa-miR-4739 1 0 0
chr12:53474936|53475086 hsa-miR-4741 1 0 0
chr12:53474936|53475086 hsa-miR-4748 1 0 0
chr12:53474936|53475086 hsa-miR-5192 1 0 0
chr12:53474936|53475086 hsa-miR-5194 1 0 0
chr12:53474936|53475086 hsa-miR-5572 1 0 0
chr12:53474936|53475086 hsa-miR-5698 1 0 0
chr12:53474936|53475086 hsa-miR-5703 1 0 0
chr12:53474936|53475086 hsa-miR-5787 1 0 0
chr12:53474936|53475086 hsa-miR-6085 1 0 0
chr12:53474936|53475086 hsa-miR-6086 1 0 0
chr12:53474936|53475086 hsa-miR-6088 1 0 0
chr12:53474936|53475086 hsa-miR-6090 1 0 0
chr12:53474936|53475086 hsa-miR-6124 1 0 0
chr12:53474936|53475086 hsa-miR-6125 1 0 0
chr12:53474936|53475086 hsa-miR-6127 1 0 0
chr12:53474936|53475086 hsa-miR-6129 1 0 0
chr12:53474936|53475086 hsa-miR-6130 1 0 0
chr12:53474936|53475086 hsa-miR-6133 1 0 0
chr12:53474936|53475086 hsa-miR-6134 1 0 0
chr12:53474936|53475086 hsa-miR-6165 1 0 0
chr12:53474936|53475086 hsa-miR-6745 1 0 0
chr12:53474936|53475086 hsa-miR-8072 1 0 0
chr12:53474936|53475086 hsa-miR-8085 1 0 0
chr12:53474936|53475086 hsa-miR-8089 1 0 0
chr12:53474936|53475086 hsa-miR-12114 1 1 0
chr12:53474936|53475086 hsa-miR-12118 1 0 0
chr12:53474936|53475086 hsa-miR-4433b-3p 1 0 0
chr12:53474936|53475086 hsa-miR-92a-1-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6734-5p 1 0 0
chr12:53474936|53475086 hsa-miR-323a-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6747-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6765-5p 1 0 0
chr12:53474936|53475086 hsa-miR-3150a-3p 1 1 0
chr12:53474936|53475086 hsa-miR-7106-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6825-5p 1 1 0
chr12:53474936|53475086 hsa-miR-6894-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6857-5p 1 0 0
chr12:53474936|53475086 hsa-miR-4687-3p 1 0 0
chr12:53474936|53475086 hsa-miR-6799-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6510-5p 1 0 0
chr12:53474936|53475086 hsa-miR-8071 1 0 0
chr12:53474936|53475086 hsa-miR-766-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6804-5p 1 1 0
chr12:53474936|53475086 hsa-miR-139-3p 1 0 0
chr12:53474936|53475086 hsa-miR-6515-5p 1 1 0
chr12:53474936|53475086 hsa-miR-6089 1 0 0
chr12:53474936|53475086 hsa-miR-6807-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6757-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6880-5p 1 1 0
chr12:53474936|53475086 hsa-miR-7847-3p 1 1 0
chr12:53474936|53475086 hsa-miR-4695-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6746-5p 1 0 0
chr12:53474936|53475086 hsa-miR-4709-3p 1 0 0
chr12:53474936|53475086 hsa-miR-4722-5p 1 0 0
chr12:53474936|53475086 hsa-miR-7154-3p 1 0 0
chr12:53474936|53475086 hsa-miR-4655-5p 1 0 0
chr12:53474936|53475086 hsa-miR-8069 1 0 0
chr12:53474936|53475086 hsa-miR-7108-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6742-5p 1 0 0
chr12:53474936|53475086 hsa-miR-3180-3p 1 0 0
chr12:53474936|53475086 hsa-miR-6748-5p 1 0 0
chr12:53474936|53475086 hsa-miR-185-3p 1 0 0
chr12:53474936|53475086 hsa-miR-6732-5p 1 1 0
chr12:53474936|53475086 hsa-miR-6805-5p 1 1 0
chr12:53474936|53475086 hsa-miR-6798-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6760-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6881-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6782-5p 1 1 0
chr12:53474936|53475086 hsa-miR-6810-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6786-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6835-5p 1 0 0
chr12:53474936|53475086 hsa-miR-7109-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6740-5p 1 0 0
chr12:53474936|53475086 hsa-miR-1229-5p 1 0 0
chr12:53474936|53475086 hsa-miR-4640-5p 1 0 0
chr12:53474936|53475086 hsa-miR-1228-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6771-5p 1 0 0
chr12:53474936|53475086 hsa-miR-4690-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6823-5p 1 0 0
chr12:53474936|53475086 hsa-miR-4787-5p 1 0 0
chr12:53474936|53475086 hsa-miR-4446-3p 1 0 0
chr12:53474936|53475086 hsa-miR-149-3p 1 0 0
chr12:53474936|53475086 hsa-miR-6824-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6789-5p 1 0 0
chr12:53474936|53475086 hsa-miR-423-5p 1 0 0
chr12:53474936|53475086 hsa-let-7e-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6767-5p 0 1 0
chr12:53474936|53475086 hsa-miR-3179 1 1 0
chr12:53474936|53475086 hsa-miR-4771 0 1 0
chr12:53474936|53475086 hsa-miR-4639-5p 1 1 0
chr12:53474936|53475086 hsa-miR-10400-5p 1 0 0
chr12:53474936|53475086 hsa-miR-1233-5p 1 0 0
chr12:53474936|53475086 hsa-miR-4763-3p 1 0 0
chr12:53474936|53475086 hsa-miR-6769b-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6778-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6787-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6812-5p 1 1 0
chr12:53474936|53475086 hsa-miR-6816-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6870-5p 1 0 0
chr12:53474936|53475086 hsa-miR-1343-5p 1 0 0
chr12:53474936|53475086 hsa-miR-3180 1 0 0
chr12:53474936|53475086 hsa-miR-5001-5p 1 1 0
chr12:53474936|53475086 hsa-miR-6726-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6737-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6743-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6752-5p 1 1 0
chr12:53474936|53475086 hsa-miR-6756-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6803-5p 1 1 0
chr12:53474936|53475086 hsa-miR-6813-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6815-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6819-5p 1 1 0
chr12:53474936|53475086 hsa-miR-6842-5p 1 1 0
chr12:53474936|53475086 hsa-miR-6851-5p 1 0 0
chr12:53474936|53475086 hsa-miR-7107-5p 1 0 0
chr12:53474936|53475086 hsa-miR-7110-5p 1 1 0
chr12:53474936|53475086 hsa-miR-10401-5p 1 0 0
chr12:53474936|53475086 hsa-miR-11181-3p 1 1 0
chr12:53474936|53475086 hsa-miR-1249-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6722-3p 1 0 0
chr12:53474936|53475086 hsa-miR-6751-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6763-5p 1 1 0
chr12:53474936|53475086 hsa-miR-6779-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6780a-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6788-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6797-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6808-5p 1 0 0
chr12:53474936|53475086 hsa-miR-7111-5p 1 1 0
chr12:53474936|53475086 hsa-miR-3620-5p 1 0 0
chr12:53474936|53475086 hsa-miR-4728-5p 1 0 0
chr12:53474936|53475086 hsa-miR-5189-5p 1 0 0
chr12:53474936|53475086 hsa-miR-5196-5p 1 1 0
chr12:53474936|53475086 hsa-miR-642b-3p 1 0 0
chr12:53474936|53475086 hsa-miR-6780b-5p 1 0 0
chr12:53474936|53475086 hsa-miR-10396b-5p 1 0 0
chr12:53474936|53475086 hsa-miR-10526-3p 1 0 0
chr12:53474936|53475086 hsa-miR-1237-5p 1 0 0
chr12:53474936|53475086 hsa-miR-328-5p 1 1 0
chr12:53474936|53475086 hsa-miR-4649-5p 1 0 0
chr12:53474936|53475086 hsa-miR-4725-3p 1 0 0
chr12:53474936|53475086 hsa-miR-4745-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6729-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6738-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6794-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6795-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6846-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6848-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6858-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6883-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6887-5p 1 0 0
chr12:53474936|53475086 hsa-miR-4697-5p 1 0 0
chr12:53474936|53475086 hsa-miR-4723-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6885-5p 1 0 0
chr12:53474936|53475086 hsa-miR-4758-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6511a-5p 1 0 0
chr12:53474936|53475086 hsa-miR-3940-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6731-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6758-5p 1 0 0
chr12:53474936|53475086 hsa-miR-1914-3p 1 0 0
chr12:53474936|53475086 hsa-miR-377-5p 1 0 0
chr12:53474936|53475086 hsa-miR-3173-3p 1 0 0
chr12:53474936|53475086 hsa-miR-6876-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6891-5p 1 0 0
chr12:53474936|53475086 hsa-miR-4716-3p 1 1 0
chr12:53474936|53475086 hsa-miR-6785-5p 1 0 0
chr12:53474936|53475086 hsa-miR-4667-5p 1 0 0
chr12:53474936|53475086 hsa-miR-4756-5p 1 0 0
chr12:53474936|53475086 hsa-miR-6884-5p 1 1 0
chr12:53474936|53475086 hsa-miR-642a-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr12:53474936|53475086
ORF Type ORF1
Protein Length 47
Nucleotide Length 144
Protein Sequence MGFMPSRLETQGAVGRGLGRLEGASEVPAVASEGVVVEEEEEEGVEG
Nucleotide Sequence ATGGGTTTCATGCCAAGCAGACTGGAGACACAAGGGGCGGTCGGAAGAGGGTTGGGGAGGCTGGAGGGTGCGTCGGAGGTCCCCGCTGTGGCGAGCGAGGGGGTGGTGGTGGAGGAGGAAGAAGAAGAAGGGGTGGAGGGTTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab