CircRNA Information

General Information
circRNA Basic Information
CircID chr12:53665217|53665431
Strand +
CircType exon
Host Gene ENSG00000135390.16;
Algorism CIRI2;
Sequence CAGGAACCCTTCTCTGAAGCAACAGCTCTTCTCCTACGCCATTCTGGGCTTTGCCCTCTCGGAGGCCATGGGGCTCTTTTGTCTGATGGTAGCCTTTCTCATCCTCTTTGCCATGTGAAGGAGCCGTCTCCACCTCCCATAGTTCTCCCGCGTCTGGTTGGCCCCGTGTGTTCCTTTTCCTATACCTCCCCAGGCAGCCTGGGGAACGTGGTTGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:53665217|53665431 hsa-miR-23a-5p 0 0 1
chr12:53665217|53665431 hsa-miR-23a-3p 0 0 1
chr12:53665217|53665431 hsa-miR-205-5p 0 0 1
chr12:53665217|53665431 hsa-miR-205-3p 0 0 1
chr12:53665217|53665431 hsa-miR-23b-5p 0 0 1
chr12:53665217|53665431 hsa-miR-23b-3p 0 0 1
chr12:53665217|53665431 hsa-miR-146a-5p 0 0 1
chr12:53665217|53665431 hsa-miR-146a-3p 0 0 1
chr12:53665217|53665431 hsa-miR-202-5p 0 0 1
chr12:53665217|53665431 hsa-miR-202-3p 0 0 1
chr12:53665217|53665431 hsa-miR-539-5p 0 0 1
chr12:53665217|53665431 hsa-miR-539-3p 0 0 1
chr12:53665217|53665431 hsa-miR-583 0 0 1
chr12:53665217|53665431 hsa-miR-602 1 1 1
chr12:53665217|53665431 hsa-miR-661 0 0 1
chr12:53665217|53665431 hsa-miR-939-5p 0 0 1
chr12:53665217|53665431 hsa-miR-939-3p 0 0 1
chr12:53665217|53665431 hsa-miR-1253 0 0 1
chr12:53665217|53665431 hsa-miR-1255a 0 0 1
chr12:53665217|53665431 hsa-miR-1276 0 1 1
chr12:53665217|53665431 hsa-miR-1324 0 0 1
chr12:53665217|53665431 hsa-miR-1225-3p 0 1 1
chr12:53665217|53665431 hsa-miR-146b-5p 0 0 1
chr12:53665217|53665431 hsa-miR-1255b 0 0 1
chr12:53665217|53665431 hsa-miR-1254 0 0 1
chr12:53665217|53665431 hsa-miR-663a 1 0 0
chr12:53665217|53665431 hsa-miR-1303 0 1 0
chr12:53665217|53665431 hsa-miR-3131 1 0 0
chr12:53665217|53665431 hsa-miR-4323 0 1 0
chr12:53665217|53665431 hsa-miR-1268b 1 0 0
chr12:53665217|53665431 hsa-miR-3689c 0 1 0
chr12:53665217|53665431 hsa-miR-4489 1 0 0
chr12:53665217|53665431 hsa-miR-4508 1 0 0
chr12:53665217|53665431 hsa-miR-4516 1 0 0
chr12:53665217|53665431 hsa-miR-4523 1 0 0
chr12:53665217|53665431 hsa-miR-4721 1 0 0
chr12:53665217|53665431 hsa-miR-4739 1 1 0
chr12:53665217|53665431 hsa-miR-5090 1 0 0
chr12:53665217|53665431 hsa-miR-6124 1 1 0
chr12:53665217|53665431 hsa-miR-8085 1 0 0
chr12:53665217|53665431 hsa-miR-8089 1 0 0
chr12:53665217|53665431 hsa-miR-12114 0 1 0
chr12:53665217|53665431 hsa-miR-12120 1 1 0
chr12:53665217|53665431 hsa-miR-6765-5p 1 0 0
chr12:53665217|53665431 hsa-miR-671-5p 1 0 0
chr12:53665217|53665431 hsa-miR-6861-5p 1 0 0
chr12:53665217|53665431 hsa-miR-6825-5p 1 1 0
chr12:53665217|53665431 hsa-miR-6894-5p 1 0 0
chr12:53665217|53665431 hsa-miR-6799-5p 0 1 0
chr12:53665217|53665431 hsa-miR-3622a-5p 1 0 0
chr12:53665217|53665431 hsa-miR-7851-3p 1 0 0
chr12:53665217|53665431 hsa-miR-1227-5p 1 0 0
chr12:53665217|53665431 hsa-miR-6880-5p 1 0 0
chr12:53665217|53665431 hsa-miR-6746-5p 1 1 0
chr12:53665217|53665431 hsa-miR-6730-5p 1 0 0
chr12:53665217|53665431 hsa-miR-6890-5p 1 0 0
chr12:53665217|53665431 hsa-miR-6820-5p 1 0 0
chr12:53665217|53665431 hsa-miR-3622b-5p 1 0 0
chr12:53665217|53665431 hsa-miR-3605-5p 0 1 0
chr12:53665217|53665431 hsa-miR-6871-5p 0 1 0
chr12:53665217|53665431 hsa-miR-659-3p 1 0 0
chr12:53665217|53665431 hsa-miR-1292-5p 1 0 0
chr12:53665217|53665431 hsa-miR-3180-3p 1 0 0
chr12:53665217|53665431 hsa-miR-6772-5p 1 0 0
chr12:53665217|53665431 hsa-miR-6829-5p 1 0 0
chr12:53665217|53665431 hsa-miR-6732-5p 1 0 0
chr12:53665217|53665431 hsa-miR-656-5p 0 1 0
chr12:53665217|53665431 hsa-miR-1224-5p 1 0 0
chr12:53665217|53665431 hsa-miR-6760-5p 1 0 0
chr12:53665217|53665431 hsa-miR-3194-5p 1 0 0
chr12:53665217|53665431 hsa-miR-30b-3p 1 1 0
chr12:53665217|53665431 hsa-miR-6852-5p 0 1 0
chr12:53665217|53665431 hsa-miR-7109-5p 1 1 0
chr12:53665217|53665431 hsa-miR-1226-5p 1 0 0
chr12:53665217|53665431 hsa-miR-4640-5p 1 0 0
chr12:53665217|53665431 hsa-miR-30c-2-3p 1 1 0
chr12:53665217|53665431 hsa-miR-6771-5p 0 1 0
chr12:53665217|53665431 hsa-miR-4787-5p 1 0 0
chr12:53665217|53665431 hsa-miR-6824-5p 1 0 0
chr12:53665217|53665431 hsa-miR-6877-5p 1 0 0
chr12:53665217|53665431 hsa-miR-664b-5p 1 0 0
chr12:53665217|53665431 hsa-miR-3191-3p 1 0 0
chr12:53665217|53665431 hsa-miR-744-5p 1 0 0
chr12:53665217|53665431 hsa-miR-2277-5p 1 0 0
chr12:53665217|53665431 hsa-miR-5589-3p 1 0 0
chr12:53665217|53665431 hsa-miR-942-3p 0 1 0
chr12:53665217|53665431 hsa-miR-1233-5p 1 0 0
chr12:53665217|53665431 hsa-miR-1273h-5p 0 1 0
chr12:53665217|53665431 hsa-miR-3689b-3p 0 1 0
chr12:53665217|53665431 hsa-miR-6778-5p 1 0 0
chr12:53665217|53665431 hsa-miR-6787-5p 1 0 0
chr12:53665217|53665431 hsa-miR-6870-5p 1 0 0
chr12:53665217|53665431 hsa-miR-6775-5p 1 0 0
chr12:53665217|53665431 hsa-miR-1343-5p 1 0 0
chr12:53665217|53665431 hsa-miR-6752-5p 1 0 0
chr12:53665217|53665431 hsa-miR-6803-5p 1 0 0
chr12:53665217|53665431 hsa-miR-6851-5p 1 0 0
chr12:53665217|53665431 hsa-miR-7107-5p 1 0 0
chr12:53665217|53665431 hsa-miR-6780a-5p 0 1 0
chr12:53665217|53665431 hsa-miR-6788-5p 1 1 0
chr12:53665217|53665431 hsa-miR-6879-5p 1 0 0
chr12:53665217|53665431 hsa-miR-6780b-5p 1 0 0
chr12:53665217|53665431 hsa-miR-10396a-5p 1 0 0
chr12:53665217|53665431 hsa-miR-10396b-5p 1 0 0
chr12:53665217|53665431 hsa-miR-3689a-3p 0 1 0
chr12:53665217|53665431 hsa-miR-4632-5p 1 0 0
chr12:53665217|53665431 hsa-miR-4725-3p 1 0 0
chr12:53665217|53665431 hsa-miR-4726-5p 1 0 0
chr12:53665217|53665431 hsa-miR-4749-5p 1 0 0
chr12:53665217|53665431 hsa-miR-6738-5p 1 0 0
chr12:53665217|53665431 hsa-miR-6795-5p 1 0 0
chr12:53665217|53665431 hsa-miR-6848-5p 1 0 0
chr12:53665217|53665431 hsa-miR-6845-5p 1 1 0
chr12:53665217|53665431 hsa-miR-6731-5p 1 0 0
chr12:53665217|53665431 hsa-miR-6758-5p 0 1 0
chr12:53665217|53665431 hsa-miR-6856-5p 1 0 0
chr12:53665217|53665431 hsa-miR-7843-5p 1 0 0
chr12:53665217|53665431 hsa-miR-4700-5p 0 1 0
chr12:53665217|53665431 hsa-miR-6785-5p 1 0 0
chr12:53665217|53665431 hsa-miR-4667-5p 0 1 0
chr12:53665217|53665431 hsa-miR-3184-5p 1 0 0
chr12:53665217|53665431 hsa-miR-6762-5p 1 0 0
chr12:53665217|53665431 hsa-miR-6859-5p 1 0 0
chr12:53665217|53665431 hsa-miR-128-2-5p 1 0 0
chr12:53665217|53665431 hsa-miR-7153-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr12:53665217|53665431
ORF Type ORF1
Protein Length 45
Nucleotide Length 135
Protein Sequence MSDGSLSHPLCHVKEPSPPPIVLPRLVGPVCSFSYTSPGSLGNVV
Nucleotide Sequence TTGTCTGATGGTAGCCTTTCTCATCCTCTTTGCCATGTGAAGGAGCCGTCTCCACCTCCCATAGTTCTCCCGCGTCTGGTTGGCCCCGTGTGTTCCTTTTCCTATACCTCCCCAGGCAGCCTGGGGAACGTGGTT

CircID chr12:53665217|53665431
ORF Type ORF2
Protein Length 34
Nucleotide Length 105
Protein Sequence MKQQLFSYAILGFALSEAMGLFCLMVAFLILFAM
Nucleotide Sequence CTGAAGCAACAGCTCTTCTCCTACGCCATTCTGGGCTTTGCCCTCTCGGAGGCCATGGGGCTCTTTTGTCTGATGGTAGCCTTTCTCATCCTCTTTGCCATGTGA

CircID chr12:53665217|53665431
ORF Type ORF3
Protein Length 36
Nucleotide Length 108
Protein Sequence MPCEGAVSTSHSSPASGWPRVFLFLYLPRQPGERGW
Nucleotide Sequence TTGCCATGTGAAGGAGCCGTCTCCACCTCCCATAGTTCTCCCGCGTCTGGTTGGCCCCGTGTGTTCCTTTTCCTATACCTCCCCAGGCAGCCTGGGGAACGTGGTTGG

CircID chr12:53665217|53665431
ORF Type ORF4
Protein Length 64
Nucleotide Length 192
Protein Sequence MGRYRKRNTRGQPDAGELWEVETAPSHGKEDEKGYHQTKEPHGLREGKAQNGVGEELLLQRRVP
Nucleotide Sequence CTGGGGAGGTATAGGAAAAGGAACACACGGGGCCAACCAGACGCGGGAGAACTATGGGAGGTGGAGACGGCTCCTTCACATGGCAAAGAGGATGAGAAAGGCTACCATCAGACAAAAGAGCCCCATGGCCTCCGAGAGGGCAAAGCCCAGAATGGCGTAGGAGAAGAGCTGTTGCTTCAGAGAAGGGTTCCT

CircID chr12:53665217|53665431
ORF Type ORF5
Protein Length 26
Nucleotide Length 81
Protein Sequence MAKRMRKATIRQKSPMASERAKPRMA
Nucleotide Sequence ATGGCAAAGAGGATGAGAAAGGCTACCATCAGACAAAAGAGCCCCATGGCCTCCGAGAGGGCAAAGCCCAGAATGGCGTAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites