CircRNA Information

General Information
circRNA Basic Information
CircID chr12:53715200|53715325
Strand -
CircType exon
Host Gene ENSG00000012822.14;
Algorism CIRI2;
Sequence CAGGCTAGAATCCTTCTCCCGGGCCAGCTCAGTCTTGAACACTTGGTTTTGGGTCCTCTCCTCCTGAACTGCCTTCTCCAATCGAAGTATCTCTGCACTCAGCTTCAGGATCTTGTCCTTCTCTGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:53715200|53715325 hsa-miR-558 0 0 1
chr12:53715200|53715325 hsa-miR-596 0 0 1
chr12:53715200|53715325 hsa-miR-620 0 0 1
chr12:53715200|53715325 hsa-miR-765 0 1 1
chr12:53715200|53715325 hsa-miR-1270 0 0 1
chr12:53715200|53715325 hsa-miR-127-5p 0 0 1
chr12:53715200|53715325 hsa-miR-611 1 0 0
chr12:53715200|53715325 hsa-miR-661 1 0 0
chr12:53715200|53715325 hsa-miR-762 1 0 0
chr12:53715200|53715325 hsa-miR-665 1 0 0
chr12:53715200|53715325 hsa-miR-663b 1 0 0
chr12:53715200|53715325 hsa-miR-1205 1 0 0
chr12:53715200|53715325 hsa-miR-1538 1 0 0
chr12:53715200|53715325 hsa-miR-3132 1 0 0
chr12:53715200|53715325 hsa-miR-3154 1 0 0
chr12:53715200|53715325 hsa-miR-3176 1 0 0
chr12:53715200|53715325 hsa-miR-4281 1 0 0
chr12:53715200|53715325 hsa-miR-3916 1 0 0
chr12:53715200|53715325 hsa-miR-3135b 1 0 0
chr12:53715200|53715325 hsa-miR-4487 1 0 0
chr12:53715200|53715325 hsa-miR-4505 1 0 0
chr12:53715200|53715325 hsa-miR-4516 1 1 0
chr12:53715200|53715325 hsa-miR-4531 1 1 0
chr12:53715200|53715325 hsa-miR-1587 1 0 0
chr12:53715200|53715325 hsa-miR-4658 1 0 0
chr12:53715200|53715325 hsa-miR-4682 1 0 0
chr12:53715200|53715325 hsa-miR-4710 1 0 0
chr12:53715200|53715325 hsa-miR-4739 1 0 0
chr12:53715200|53715325 hsa-miR-4741 1 0 0
chr12:53715200|53715325 hsa-miR-4751 1 1 0
chr12:53715200|53715325 hsa-miR-5192 1 0 0
chr12:53715200|53715325 hsa-miR-5703 1 0 0
chr12:53715200|53715325 hsa-miR-6124 1 0 0
chr12:53715200|53715325 hsa-miR-6125 1 0 0
chr12:53715200|53715325 hsa-miR-8063 0 1 0
chr12:53715200|53715325 hsa-miR-8077 0 1 0
chr12:53715200|53715325 hsa-miR-12127 1 0 0
chr12:53715200|53715325 hsa-miR-12128 1 0 0
chr12:53715200|53715325 hsa-miR-1247-3p 0 1 0
chr12:53715200|53715325 hsa-miR-7106-5p 1 1 0
chr12:53715200|53715325 hsa-miR-6894-5p 1 0 0
chr12:53715200|53715325 hsa-miR-766-5p 1 0 0
chr12:53715200|53715325 hsa-miR-6833-5p 1 0 0
chr12:53715200|53715325 hsa-miR-7847-3p 1 0 0
chr12:53715200|53715325 hsa-miR-4695-5p 1 0 0
chr12:53715200|53715325 hsa-miR-6746-5p 1 1 0
chr12:53715200|53715325 hsa-miR-197-5p 1 0 0
chr12:53715200|53715325 hsa-miR-6776-5p 1 0 0
chr12:53715200|53715325 hsa-miR-6798-5p 1 0 0
chr12:53715200|53715325 hsa-miR-6770-5p 0 1 0
chr12:53715200|53715325 hsa-miR-3126-5p 1 1 0
chr12:53715200|53715325 hsa-miR-2467-3p 1 0 0
chr12:53715200|53715325 hsa-miR-3156-5p 0 1 0
chr12:53715200|53715325 hsa-miR-1226-5p 1 0 0
chr12:53715200|53715325 hsa-miR-30c-2-3p 1 1 0
chr12:53715200|53715325 hsa-miR-6749-5p 1 0 0
chr12:53715200|53715325 hsa-miR-6824-5p 1 0 0
chr12:53715200|53715325 hsa-miR-6878-5p 0 1 0
chr12:53715200|53715325 hsa-miR-873-3p 1 0 0
chr12:53715200|53715325 hsa-miR-4661-3p 1 0 0
chr12:53715200|53715325 hsa-miR-6857-3p 0 1 0
chr12:53715200|53715325 hsa-miR-338-5p 1 1 0
chr12:53715200|53715325 hsa-miR-1207-5p 1 0 0
chr12:53715200|53715325 hsa-miR-6769b-5p 1 0 0
chr12:53715200|53715325 hsa-miR-6865-5p 1 0 0
chr12:53715200|53715325 hsa-miR-1343-5p 1 0 0
chr12:53715200|53715325 hsa-miR-6743-5p 1 0 0
chr12:53715200|53715325 hsa-miR-6851-5p 1 0 0
chr12:53715200|53715325 hsa-miR-7107-5p 1 0 0
chr12:53715200|53715325 hsa-miR-11181-3p 1 1 0
chr12:53715200|53715325 hsa-miR-1249-5p 1 0 0
chr12:53715200|53715325 hsa-miR-6788-5p 1 0 0
chr12:53715200|53715325 hsa-miR-6797-5p 1 0 0
chr12:53715200|53715325 hsa-miR-6808-5p 1 0 0
chr12:53715200|53715325 hsa-miR-6879-5p 1 0 0
chr12:53715200|53715325 hsa-miR-7111-5p 1 0 0
chr12:53715200|53715325 hsa-miR-3620-5p 1 0 0
chr12:53715200|53715325 hsa-miR-6780b-5p 1 0 0
chr12:53715200|53715325 hsa-miR-4725-3p 1 0 0
chr12:53715200|53715325 hsa-miR-6729-5p 1 0 0
chr12:53715200|53715325 hsa-miR-6858-5p 1 0 0
chr12:53715200|53715325 hsa-miR-6758-5p 0 1 0
chr12:53715200|53715325 hsa-miR-1914-3p 1 0 0
chr12:53715200|53715325 hsa-miR-3184-5p 1 0 0
chr12:53715200|53715325 hsa-miR-147b-3p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr12:53715200|53715325
ORF Type ORF1
Protein Length 28
Nucleotide Length 84
Protein Sequence MVLGPLLLNCLLQSKYLCTQLQDLVLLC
Nucleotide Sequence TTGGTTTTGGGTCCTCTCCTCCTGAACTGCCTTCTCCAATCGAAGTATCTCTGCACTCAGCTTCAGGATCTTGTCCTTCTCTGC
CircID chr12:53715200|53715325
ORF Type ORF2
Protein Length 36
Nucleotide Length 108
Protein Sequence MKLSAEILRLEKAVQEERTQNQVFKTELAREKDSSL
Nucleotide Sequence CTGAAGCTGAGTGCAGAGATACTTCGATTGGAGAAGGCAGTTCAGGAGGAGAGGACCCAAAACCAAGTGTTCAAGACTGAGCTGGCCCGGGAGAAGGATTCTAGCCTG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab