CircRNA Information

General Information
circRNA Basic Information
CircID chr12:54283091|54283234
Strand +
CircType exon
Host Gene ENSG00000135486.16;
Algorism CIRI2;
Sequence CACTACCACCGCCAAAGCCGCCTCCGCCTCCGTTGTTATAGCTGTCATAGCTGCCACTCCCGCCATAGCCACTGCCCTGGTTTCCATAACCCTGTCCACCACTTCCATAGCCTCTGCTTCCTCCAGAGTAACCAGGGCCGCCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:54283091|54283234 hsa-miR-34a-5p 0 0 1
chr12:54283091|54283234 hsa-miR-34a-3p 0 0 1
chr12:54283091|54283234 hsa-miR-425-5p 0 0 1
chr12:54283091|54283234 hsa-miR-425-3p 0 0 1
chr12:54283091|54283234 hsa-miR-449a 0 0 1
chr12:54283091|54283234 hsa-miR-652-5p 0 0 1
chr12:54283091|54283234 hsa-miR-652-3p 0 0 1
chr12:54283091|54283234 hsa-miR-449b-5p 0 0 1
chr12:54283091|54283234 hsa-miR-449b-3p 0 0 1
chr12:54283091|54283234 hsa-miR-658 1 0 1
chr12:54283091|54283234 hsa-miR-765 0 0 1
chr12:54283091|54283234 hsa-miR-1291 0 0 1
chr12:54283091|54283234 hsa-miR-885-3p 1 0 1
chr12:54283091|54283234 hsa-miR-409-5p 0 0 1
chr12:54283091|54283234 hsa-miR-34c-5p 0 0 1
chr12:54283091|54283234 hsa-miR-516b 0 0 1
chr12:54283091|54283234 hsa-miR-663 0 0 1
chr12:54283091|54283234 hsa-miR-608 1 1 0
chr12:54283091|54283234 hsa-miR-650 1 0 0
chr12:54283091|54283234 hsa-miR-663a 1 0 0
chr12:54283091|54283234 hsa-miR-762 1 0 0
chr12:54283091|54283234 hsa-miR-760 1 0 0
chr12:54283091|54283234 hsa-miR-1268a 1 0 0
chr12:54283091|54283234 hsa-miR-1275 1 0 0
chr12:54283091|54283234 hsa-miR-3125 1 0 0
chr12:54283091|54283234 hsa-miR-3138 1 1 0
chr12:54283091|54283234 hsa-miR-3141 1 0 0
chr12:54283091|54283234 hsa-miR-3188 1 0 0
chr12:54283091|54283234 hsa-miR-3196 1 0 0
chr12:54283091|54283234 hsa-miR-3197 1 0 0
chr12:54283091|54283234 hsa-miR-4298 1 0 0
chr12:54283091|54283234 hsa-miR-3612 1 0 0
chr12:54283091|54283234 hsa-miR-3916 1 0 0
chr12:54283091|54283234 hsa-miR-3937 1 0 0
chr12:54283091|54283234 hsa-miR-1268b 1 0 0
chr12:54283091|54283234 hsa-miR-4430 1 0 0
chr12:54283091|54283234 hsa-miR-4443 1 0 0
chr12:54283091|54283234 hsa-miR-4467 1 0 0
chr12:54283091|54283234 hsa-miR-4487 1 0 0
chr12:54283091|54283234 hsa-miR-4488 1 0 0
chr12:54283091|54283234 hsa-miR-4510 1 1 0
chr12:54283091|54283234 hsa-miR-4526 1 0 0
chr12:54283091|54283234 hsa-miR-3960 1 0 0
chr12:54283091|54283234 hsa-miR-4656 1 0 0
chr12:54283091|54283234 hsa-miR-4657 1 0 0
chr12:54283091|54283234 hsa-miR-4660 1 0 0
chr12:54283091|54283234 hsa-miR-4739 1 0 0
chr12:54283091|54283234 hsa-miR-5693 0 1 0
chr12:54283091|54283234 hsa-miR-5698 1 0 0
chr12:54283091|54283234 hsa-miR-5787 1 0 0
chr12:54283091|54283234 hsa-miR-6127 1 0 0
chr12:54283091|54283234 hsa-miR-6133 1 0 0
chr12:54283091|54283234 hsa-miR-6134 1 0 0
chr12:54283091|54283234 hsa-miR-6860 1 1 0
chr12:54283091|54283234 hsa-miR-7704 1 0 0
chr12:54283091|54283234 hsa-miR-8072 1 0 0
chr12:54283091|54283234 hsa-miR-8074 1 1 0
chr12:54283091|54283234 hsa-miR-12114 1 0 0
chr12:54283091|54283234 hsa-miR-12127 1 0 0
chr12:54283091|54283234 hsa-miR-4433b-3p 1 0 0
chr12:54283091|54283234 hsa-miR-4433a-3p 1 0 0
chr12:54283091|54283234 hsa-miR-6765-5p 1 0 0
chr12:54283091|54283234 hsa-miR-671-5p 1 0 0
chr12:54283091|54283234 hsa-miR-7106-5p 1 0 0
chr12:54283091|54283234 hsa-miR-6894-5p 1 0 0
chr12:54283091|54283234 hsa-miR-4687-3p 1 0 0
chr12:54283091|54283234 hsa-miR-25-5p 1 0 0
chr12:54283091|54283234 hsa-miR-6799-5p 1 0 0
chr12:54283091|54283234 hsa-miR-8071 1 0 0
chr12:54283091|54283234 hsa-miR-6833-5p 1 0 0
chr12:54283091|54283234 hsa-miR-7114-5p 1 0 0
chr12:54283091|54283234 hsa-miR-6880-5p 1 0 0
chr12:54283091|54283234 hsa-miR-7847-3p 1 0 0
chr12:54283091|54283234 hsa-miR-4695-5p 1 0 0
chr12:54283091|54283234 hsa-miR-6746-5p 1 0 0
chr12:54283091|54283234 hsa-miR-6721-5p 1 0 0
chr12:54283091|54283234 hsa-miR-197-5p 1 0 0
chr12:54283091|54283234 hsa-miR-7108-5p 1 0 0
chr12:54283091|54283234 hsa-miR-6716-5p 1 0 0
chr12:54283091|54283234 hsa-miR-6871-5p 1 0 0
chr12:54283091|54283234 hsa-miR-3180-3p 1 0 0
chr12:54283091|54283234 hsa-miR-6732-5p 1 0 0
chr12:54283091|54283234 hsa-miR-3190-3p 1 0 0
chr12:54283091|54283234 hsa-miR-6805-5p 1 0 0
chr12:54283091|54283234 hsa-miR-6760-5p 1 0 0
chr12:54283091|54283234 hsa-miR-2467-3p 1 1 0
chr12:54283091|54283234 hsa-miR-6782-5p 1 0 0
chr12:54283091|54283234 hsa-miR-6874-5p 1 0 0
chr12:54283091|54283234 hsa-miR-5006-5p 1 0 0
chr12:54283091|54283234 hsa-miR-6753-5p 1 1 0
chr12:54283091|54283234 hsa-miR-1908-5p 1 0 0
chr12:54283091|54283234 hsa-miR-6771-5p 1 0 0
chr12:54283091|54283234 hsa-miR-6847-5p 1 0 0
chr12:54283091|54283234 hsa-miR-4787-5p 1 1 0
chr12:54283091|54283234 hsa-miR-149-3p 1 0 0
chr12:54283091|54283234 hsa-miR-6824-5p 1 0 0
chr12:54283091|54283234 hsa-miR-6828-5p 1 0 0
chr12:54283091|54283234 hsa-miR-6781-5p 1 0 0
chr12:54283091|54283234 hsa-miR-516b-5p 0 1 0
chr12:54283091|54283234 hsa-miR-664b-5p 1 0 0
chr12:54283091|54283234 hsa-miR-744-5p 1 0 0
chr12:54283091|54283234 hsa-miR-6792-5p 0 1 0
chr12:54283091|54283234 hsa-miR-518c-5p 1 1 0
chr12:54283091|54283234 hsa-miR-514a-5p 0 1 0
chr12:54283091|54283234 hsa-miR-548at-5p 1 0 0
chr12:54283091|54283234 hsa-miR-10400-5p 1 1 0
chr12:54283091|54283234 hsa-miR-1207-5p 1 0 0
chr12:54283091|54283234 hsa-miR-1233-5p 1 0 0
chr12:54283091|54283234 hsa-miR-4763-3p 1 0 0
chr12:54283091|54283234 hsa-miR-6769b-5p 1 0 0
chr12:54283091|54283234 hsa-miR-6778-5p 1 0 0
chr12:54283091|54283234 hsa-miR-6787-5p 1 1 0
chr12:54283091|54283234 hsa-miR-6816-5p 1 0 0
chr12:54283091|54283234 hsa-miR-6865-5p 1 0 0
chr12:54283091|54283234 hsa-miR-6775-5p 1 0 0
chr12:54283091|54283234 hsa-miR-3180 1 0 0
chr12:54283091|54283234 hsa-miR-6726-5p 1 0 0
chr12:54283091|54283234 hsa-miR-6743-5p 1 0 0
chr12:54283091|54283234 hsa-miR-6752-5p 1 0 0
chr12:54283091|54283234 hsa-miR-6815-5p 1 0 0
chr12:54283091|54283234 hsa-miR-6851-5p 1 0 0
chr12:54283091|54283234 hsa-miR-11181-3p 1 0 0
chr12:54283091|54283234 hsa-miR-1249-5p 1 0 0
chr12:54283091|54283234 hsa-miR-6722-3p 1 0 0
chr12:54283091|54283234 hsa-miR-6779-5p 1 0 0
chr12:54283091|54283234 hsa-miR-6780a-5p 1 0 0
chr12:54283091|54283234 hsa-miR-6797-5p 1 0 0
chr12:54283091|54283234 hsa-miR-6879-5p 1 1 0
chr12:54283091|54283234 hsa-miR-7111-5p 1 0 0
chr12:54283091|54283234 hsa-miR-1915-3p 1 0 0
chr12:54283091|54283234 hsa-miR-4728-5p 1 0 0
chr12:54283091|54283234 hsa-miR-6780b-5p 1 0 0
chr12:54283091|54283234 hsa-miR-10396b-5p 1 0 0
chr12:54283091|54283234 hsa-miR-10526-3p 1 0 0
chr12:54283091|54283234 hsa-miR-1237-5p 1 0 0
chr12:54283091|54283234 hsa-miR-328-5p 1 0 0
chr12:54283091|54283234 hsa-miR-449c-5p 1 0 0
chr12:54283091|54283234 hsa-miR-4632-5p 1 1 0
chr12:54283091|54283234 hsa-miR-4685-5p 1 1 0
chr12:54283091|54283234 hsa-miR-4745-5p 1 0 0
chr12:54283091|54283234 hsa-miR-4749-5p 1 0 0
chr12:54283091|54283234 hsa-miR-675-5p 1 0 0
chr12:54283091|54283234 hsa-miR-6846-5p 1 0 0
chr12:54283091|54283234 hsa-miR-6848-5p 1 0 0
chr12:54283091|54283234 hsa-miR-6858-5p 1 0 0
chr12:54283091|54283234 hsa-miR-6831-5p 1 0 0
chr12:54283091|54283234 hsa-miR-939-5p 0 1 0
chr12:54283091|54283234 hsa-miR-6511a-5p 1 0 0
chr12:54283091|54283234 hsa-miR-377-5p 1 0 0
chr12:54283091|54283234 hsa-miR-4665-5p 1 0 0
chr12:54283091|54283234 hsa-miR-3679-5p 1 0 0
chr12:54283091|54283234 hsa-miR-6849-5p 1 0 0
chr12:54283091|54283234 hsa-miR-6775-3p 0 1 0
chr12:54283091|54283234 hsa-miR-6884-5p 1 1 0
chr12:54283091|54283234 hsa-miR-542-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr12:54283091|54283234
ORF Type ORF1
Protein Length 45
Nucleotide Length 135
Protein Sequence MVTLEEAEAMEVVDRVMETRAVAMAGVAAMTAITTEAEAALAVVV
Nucleotide Sequence CTGGTTACTCTGGAGGAAGCAGAGGCTATGGAAGTGGTGGACAGGGTTATGGAAACCAGGGCAGTGGCTATGGCGGGAGTGGCAGCTATGACAGCTATAACAACGGAGGCGGAGGCGGCTTTGGCGGTGGTAGTG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab