CircRNA Information

General Information
circRNA Basic Information
CircID chr12:54948125|54948457
Strand +
CircType exon
Host Gene ENSG00000135426.13;
Algorism CIRI2;
Sequence CCAGTAATCCAATCACCACCCACCAGGCCCCACCTCCAACAATGGGGATTACAGTTTGACATGAGATTTGGGTGAGGACACAGATCCAAACTGTCAGGCCTCTGAGCCCAAGCTAAGCCATCATATCCCCTGTGACCTGCATGTATACATCCAGATGGCCTGAAGCAAGTGGAGAATCACAAAAGAAGTGAAAATGGCCTGTTGCTGCCTTAACAGATGACATTACTTTGTGAAATTCCTTCTTCTGGCTCAGAAGCTCCCCCACTGAGCACCTTGTGACCCCCACCCCTGCCTGCCAGAGAATAATCCCCTTTGACTGTAATTTTCCACTAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:54948125|54948457 hsa-miR-18a-5p 0 0 1
chr12:54948125|54948457 hsa-miR-18a-3p 0 0 1
chr12:54948125|54948457 hsa-miR-216a-5p 0 0 1
chr12:54948125|54948457 hsa-miR-216a-3p 0 0 1
chr12:54948125|54948457 hsa-miR-326 0 0 1
chr12:54948125|54948457 hsa-miR-135b-5p 0 0 1
chr12:54948125|54948457 hsa-miR-135b-3p 0 0 1
chr12:54948125|54948457 hsa-miR-18b-5p 0 0 1
chr12:54948125|54948457 hsa-miR-18b-3p 0 0 1
chr12:54948125|54948457 hsa-miR-506-5p 0 0 1
chr12:54948125|54948457 hsa-miR-506-3p 0 0 1
chr12:54948125|54948457 hsa-miR-559 0 0 1
chr12:54948125|54948457 hsa-miR-608 1 1 1
chr12:54948125|54948457 hsa-miR-624-5p 0 0 1
chr12:54948125|54948457 hsa-miR-624-3p 0 0 1
chr12:54948125|54948457 hsa-miR-625-5p 0 0 1
chr12:54948125|54948457 hsa-miR-625-3p 0 0 1
chr12:54948125|54948457 hsa-miR-635 0 0 1
chr12:54948125|54948457 hsa-miR-657 0 0 1
chr12:54948125|54948457 hsa-miR-758-5p 0 0 1
chr12:54948125|54948457 hsa-miR-758-3p 0 0 1
chr12:54948125|54948457 hsa-miR-541-5p 0 0 1
chr12:54948125|54948457 hsa-miR-541-3p 0 0 1
chr12:54948125|54948457 hsa-miR-920 0 1 1
chr12:54948125|54948457 hsa-miR-939-5p 0 0 1
chr12:54948125|54948457 hsa-miR-939-3p 0 0 1
chr12:54948125|54948457 hsa-miR-940 0 0 1
chr12:54948125|54948457 hsa-miR-548j-5p 0 0 1
chr12:54948125|54948457 hsa-miR-548j-3p 0 0 1
chr12:54948125|54948457 hsa-miR-1293 0 0 1
chr12:54948125|54948457 hsa-miR-548g-5p 0 0 1
chr12:54948125|54948457 hsa-miR-548g-3p 0 0 1
chr12:54948125|54948457 hsa-miR-1272 0 0 1
chr12:54948125|54948457 hsa-miR-1275 0 1 1
chr12:54948125|54948457 hsa-miR-1252-5p 0 0 1
chr12:54948125|54948457 hsa-miR-1252-3p 0 0 1
chr12:54948125|54948457 hsa-miR-513b-5p 0 0 1
chr12:54948125|54948457 hsa-miR-513b-3p 0 0 1
chr12:54948125|54948457 hsa-miR-1322 0 0 1
chr12:54948125|54948457 hsa-miR-654-5p 0 0 1
chr12:54948125|54948457 hsa-miR-509-3p 0 0 1
chr12:54948125|54948457 hsa-miR-513a-5p 0 1 1
chr12:54948125|54948457 hsa-miR-582-5p 0 0 1
chr12:54948125|54948457 hsa-miR-1207-5p 1 0 1
chr12:54948125|54948457 hsa-miR-330-5p 0 0 1
chr12:54948125|54948457 hsa-miR-548b-5p 0 0 1
chr12:54948125|54948457 hsa-miR-548d-5p 0 0 1
chr12:54948125|54948457 hsa-miR-515-5p 0 0 1
chr12:54948125|54948457 hsa-miR-548c-5p 0 0 1
chr12:54948125|54948457 hsa-miR-548a-5p 0 0 1
chr12:54948125|54948457 hsa-miR-548i 0 0 1
chr12:54948125|54948457 hsa-miR-220c 0 0 1
chr12:54948125|54948457 hsa-miR-124 0 0 1
chr12:54948125|54948457 hsa-miR-135a 0 0 1
chr12:54948125|54948457 hsa-miR-24 0 0 1
chr12:54948125|54948457 hsa-miR-768-5p 0 0 1
chr12:54948125|54948457 hsa-miR-548h 0 0 1
chr12:54948125|54948457 hsa-miR-638 1 0 0
chr12:54948125|54948457 hsa-miR-663a 1 0 0
chr12:54948125|54948457 hsa-miR-762 1 0 0
chr12:54948125|54948457 hsa-miR-1268a 1 0 0
chr12:54948125|54948457 hsa-miR-2861 1 1 0
chr12:54948125|54948457 hsa-miR-4303 0 1 0
chr12:54948125|54948457 hsa-miR-3621 1 0 0
chr12:54948125|54948457 hsa-miR-3665 1 0 0
chr12:54948125|54948457 hsa-miR-3714 0 1 0
chr12:54948125|54948457 hsa-miR-3945 1 0 0
chr12:54948125|54948457 hsa-miR-1268b 1 0 0
chr12:54948125|54948457 hsa-miR-4437 0 1 0
chr12:54948125|54948457 hsa-miR-4447 0 1 0
chr12:54948125|54948457 hsa-miR-4453 0 1 0
chr12:54948125|54948457 hsa-miR-4457 0 1 0
chr12:54948125|54948457 hsa-miR-4514 1 1 0
chr12:54948125|54948457 hsa-miR-4534 1 0 0
chr12:54948125|54948457 hsa-miR-3978 1 0 0
chr12:54948125|54948457 hsa-miR-4651 1 0 0
chr12:54948125|54948457 hsa-miR-4692 1 1 0
chr12:54948125|54948457 hsa-miR-4706 1 0 0
chr12:54948125|54948457 hsa-miR-5093 1 0 0
chr12:54948125|54948457 hsa-miR-5572 1 0 0
chr12:54948125|54948457 hsa-miR-4666b 1 1 0
chr12:54948125|54948457 hsa-miR-5706 0 1 0
chr12:54948125|54948457 hsa-miR-5787 1 0 0
chr12:54948125|54948457 hsa-miR-6124 1 0 0
chr12:54948125|54948457 hsa-miR-6132 1 0 0
chr12:54948125|54948457 hsa-miR-6745 1 0 0
chr12:54948125|54948457 hsa-miR-7150 1 1 0
chr12:54948125|54948457 hsa-miR-12115 1 0 0
chr12:54948125|54948457 hsa-miR-370-3p 1 0 0
chr12:54948125|54948457 hsa-miR-4433b-3p 1 0 0
chr12:54948125|54948457 hsa-miR-92a-2-5p 0 1 0
chr12:54948125|54948457 hsa-miR-15a-3p 0 1 0
chr12:54948125|54948457 hsa-miR-4433a-3p 1 0 0
chr12:54948125|54948457 hsa-miR-1972 0 1 0
chr12:54948125|54948457 hsa-miR-6799-5p 1 0 0
chr12:54948125|54948457 hsa-miR-1227-5p 1 1 0
chr12:54948125|54948457 hsa-miR-6807-5p 0 1 0
chr12:54948125|54948457 hsa-miR-6741-5p 1 0 0
chr12:54948125|54948457 hsa-miR-6806-5p 1 0 0
chr12:54948125|54948457 hsa-miR-6721-5p 1 0 0
chr12:54948125|54948457 hsa-miR-6776-5p 1 0 0
chr12:54948125|54948457 hsa-miR-6748-5p 1 1 0
chr12:54948125|54948457 hsa-miR-6793-5p 1 0 0
chr12:54948125|54948457 hsa-miR-6732-5p 1 0 0
chr12:54948125|54948457 hsa-miR-3190-3p 1 0 0
chr12:54948125|54948457 hsa-miR-6798-5p 1 1 0
chr12:54948125|54948457 hsa-miR-6782-5p 1 1 0
chr12:54948125|54948457 hsa-miR-4436b-5p 0 1 0
chr12:54948125|54948457 hsa-miR-615-5p 1 0 0
chr12:54948125|54948457 hsa-miR-6786-5p 1 0 0
chr12:54948125|54948457 hsa-miR-5010-3p 1 0 0
chr12:54948125|54948457 hsa-miR-6749-5p 1 0 0
chr12:54948125|54948457 hsa-miR-4787-5p 1 0 0
chr12:54948125|54948457 hsa-miR-6824-5p 1 0 0
chr12:54948125|54948457 hsa-miR-6800-5p 1 0 0
chr12:54948125|54948457 hsa-miR-194-3p 0 1 0
chr12:54948125|54948457 hsa-miR-6870-3p 0 1 0
chr12:54948125|54948457 hsa-miR-3191-3p 1 0 0
chr12:54948125|54948457 hsa-miR-3681-5p 1 0 0
chr12:54948125|54948457 hsa-miR-4727-3p 1 0 0
chr12:54948125|54948457 hsa-miR-1296-3p 0 1 0
chr12:54948125|54948457 hsa-miR-1233-5p 1 0 0
chr12:54948125|54948457 hsa-miR-4763-3p 1 1 0
chr12:54948125|54948457 hsa-miR-6769b-5p 1 1 0
chr12:54948125|54948457 hsa-miR-6787-5p 1 0 0
chr12:54948125|54948457 hsa-miR-6893-5p 1 1 0
chr12:54948125|54948457 hsa-miR-6775-5p 1 0 0
chr12:54948125|54948457 hsa-miR-6726-5p 0 1 0
chr12:54948125|54948457 hsa-miR-6737-5p 1 0 0
chr12:54948125|54948457 hsa-miR-6752-5p 1 1 0
chr12:54948125|54948457 hsa-miR-6756-5p 1 1 0
chr12:54948125|54948457 hsa-miR-6803-5p 1 1 0
chr12:54948125|54948457 hsa-miR-6819-5p 1 1 0
chr12:54948125|54948457 hsa-miR-6851-5p 1 1 0
chr12:54948125|54948457 hsa-miR-7107-5p 1 0 0
chr12:54948125|54948457 hsa-miR-7110-5p 1 0 0
chr12:54948125|54948457 hsa-miR-11181-3p 1 0 0
chr12:54948125|54948457 hsa-miR-6722-3p 1 1 0
chr12:54948125|54948457 hsa-miR-6751-5p 1 1 0
chr12:54948125|54948457 hsa-miR-6774-5p 0 1 0
chr12:54948125|54948457 hsa-miR-6808-5p 1 1 0
chr12:54948125|54948457 hsa-miR-6879-5p 1 0 0
chr12:54948125|54948457 hsa-miR-5196-5p 1 0 0
chr12:54948125|54948457 hsa-miR-10396b-5p 1 0 0
chr12:54948125|54948457 hsa-miR-1237-5p 1 0 0
chr12:54948125|54948457 hsa-miR-1909-3p 1 1 0
chr12:54948125|54948457 hsa-miR-328-5p 1 1 0
chr12:54948125|54948457 hsa-miR-4745-5p 1 0 0
chr12:54948125|54948457 hsa-miR-6846-5p 1 0 0
chr12:54948125|54948457 hsa-miR-6848-5p 1 0 0
chr12:54948125|54948457 hsa-miR-4723-5p 0 1 0
chr12:54948125|54948457 hsa-miR-6511a-5p 1 0 0
chr12:54948125|54948457 hsa-miR-6511b-5p 1 1 0
chr12:54948125|54948457 hsa-miR-4665-5p 0 1 0
chr12:54948125|54948457 hsa-miR-4472 0 1 0
chr12:54948125|54948457 hsa-miR-6849-5p 1 0 0
chr12:54948125|54948457 hsa-miR-6784-3p 0 1 0
chr12:54948125|54948457 hsa-miR-6862-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr12:54948125|54948457
ORF Type ORF1
Protein Length 31
Nucleotide Length 96
Protein Sequence MGEDTDPNCQASEPKLSHHIPCDLHVYIQMA
Nucleotide Sequence TTGGGTGAGGACACAGATCCAAACTGTCAGGCCTCTGAGCCCAAGCTAAGCCATCATATCCCCTGTGACCTGCATGTATACATCCAGATGGCCTGA

CircID chr12:54948125|54948457
ORF Type ORF2
Protein Length 31
Nucleotide Length 96
Protein Sequence MLRQQQAIFTSFVILHLLQAIWMYTCRSQGI
Nucleotide Sequence CTGTTAAGGCAGCAACAGGCCATTTTCACTTCTTTTGTGATTCTCCACTTGCTTCAGGCCATCTGGATGTATACATGCAGGTCACAGGGGATATGA

CircID chr12:54948125|54948457
ORF Type ORF3
Protein Length 29
Nucleotide Length 90
Protein Sequence MAGRGGGHKVLSGGASEPEEGISQSNVIC
Nucleotide Sequence CTGGCAGGCAGGGGTGGGGGTCACAAGGTGCTCAGTGGGGGAGCTTCTGAGCCAGAAGAAGGAATTTCACAAAGTAATGTCATCTGTTAA

CircID chr12:54948125|54948457
ORF Type ORF4
Protein Length 29
Nucleotide Length 87
Protein Sequence MDLCPHPNLMSNCNPHCWRWGLVGGDWIT
Nucleotide Sequence TTGGATCTGTGTCCTCACCCAAATCTCATGTCAAACTGTAATCCCCATTGTTGGAGGTGGGGCCTGGTGGGTGGTGATTGGATTACT

CircID chr12:54948125|54948457
ORF Type ORF5
Protein Length 46
Nucleotide Length 141
Protein Sequence MSQKKEFHKVMSSVKAATGHFHFFCDSPLASGHLDVYMQVTGDMMA
Nucleotide Sequence CTGAGCCAGAAGAAGGAATTTCACAAAGTAATGTCATCTGTTAAGGCAGCAACAGGCCATTTTCACTTCTTTTGTGATTCTCCACTTGCTTCAGGCCATCTGGATGTATACATGCAGGTCACAGGGGATATGATGGCTTAG

CircID chr12:54948125|54948457
ORF Type ORF6
Protein Length 32
Nucleotide Length 96
Protein Sequence MTVWICVLTQISCQTVIPIVGGGAWWVVIGLL
Nucleotide Sequence CTGACAGTTTGGATCTGTGTCCTCACCCAAATCTCATGTCAAACTGTAATCCCCATTGTTGGAGGTGGGGCCTGGTGGGTGGTGATTGGATTACTG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites