CircRNA Information

General Information
circRNA Basic Information
CircID chr12:55726890|55727286
Strand -
CircType exon
Host Gene ENSG00000135404.10;
Algorism CIRI2;
Sequence CTTATCTCTAAACACATAGCCAGCAATGGCTGCGGCCACCTCCACCAACATGATAAGAGACAGAAAGATGGCAAACTGCAGGAGCAAAGGACAGAAGTCAAGTTTGGAGTCTATGCATTACAGGGGCCCGTTTTGGCACAGCCGGTCCCTGGACACTCACAAAGGTCTTCCTCACCCACCCACCTCACCCACCTTCCTGAGCCCGAACCAAGCTGCTCTGGCAGTCCCAGACCGCCCATGTTGGTCCCGCCCCCAACTCACCGTGATCATAAGACAATAGTTCTCCTTGCAGGCCCCGCAGCAGCCCACAAAAGCCACCAGGAAGAGGAAGACACCCACTGCGATGATGACCACTGGCAACAGAGAGCCAGGGGTAGCCCCCTGGATTATGGTCTGA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:55726890|55727286 hsa-miR-198 0 0 1
chr12:55726890|55727286 hsa-miR-146a-5p 0 0 1
chr12:55726890|55727286 hsa-miR-146a-3p 0 0 1
chr12:55726890|55727286 hsa-miR-149-5p 0 0 1
chr12:55726890|55727286 hsa-miR-149-3p 0 0 1
chr12:55726890|55727286 hsa-miR-511-5p 0 0 1
chr12:55726890|55727286 hsa-miR-511-3p 0 0 1
chr12:55726890|55727286 hsa-miR-571 0 0 1
chr12:55726890|55727286 hsa-miR-593-5p 0 0 1
chr12:55726890|55727286 hsa-miR-593-3p 0 0 1
chr12:55726890|55727286 hsa-miR-609 1 1 1
chr12:55726890|55727286 hsa-miR-617 0 0 1
chr12:55726890|55727286 hsa-miR-646 0 0 1
chr12:55726890|55727286 hsa-miR-659-5p 0 0 1
chr12:55726890|55727286 hsa-miR-659-3p 0 0 1
chr12:55726890|55727286 hsa-miR-758-5p 0 0 1
chr12:55726890|55727286 hsa-miR-758-3p 0 0 1
chr12:55726890|55727286 hsa-miR-744-5p 0 0 1
chr12:55726890|55727286 hsa-miR-744-3p 0 0 1
chr12:55726890|55727286 hsa-miR-873-5p 0 0 1
chr12:55726890|55727286 hsa-miR-873-3p 0 0 1
chr12:55726890|55727286 hsa-miR-760 1 0 1
chr12:55726890|55727286 hsa-miR-1227-5p 0 0 1
chr12:55726890|55727286 hsa-miR-1227-3p 0 0 1
chr12:55726890|55727286 hsa-miR-1236-5p 0 0 1
chr12:55726890|55727286 hsa-miR-1236-3p 0 0 1
chr12:55726890|55727286 hsa-miR-1202 1 0 1
chr12:55726890|55727286 hsa-miR-1293 1 1 1
chr12:55726890|55727286 hsa-miR-1294 0 0 1
chr12:55726890|55727286 hsa-miR-1303 0 0 1
chr12:55726890|55727286 hsa-miR-1262 0 0 1
chr12:55726890|55727286 hsa-miR-1267 0 0 1
chr12:55726890|55727286 hsa-miR-1275 0 0 1
chr12:55726890|55727286 hsa-miR-1288-5p 0 0 1
chr12:55726890|55727286 hsa-miR-1288-3p 0 0 1
chr12:55726890|55727286 hsa-miR-296-5p 0 0 1
chr12:55726890|55727286 hsa-miR-574-5p 0 0 1
chr12:55726890|55727286 hsa-miR-331-3p 0 0 1
chr12:55726890|55727286 hsa-miR-146b-5p 0 0 1
chr12:55726890|55727286 hsa-miR-7 0 0 1
chr12:55726890|55727286 hsa-miR-153 0 0 1
chr12:55726890|55727286 hsa-miR-24 0 0 1
chr12:55726890|55727286 hsa-miR-219-1-3p 0 0 1
chr12:55726890|55727286 hsa-miR-601 1 0 0
chr12:55726890|55727286 hsa-miR-608 1 0 0
chr12:55726890|55727286 hsa-miR-637 1 0 0
chr12:55726890|55727286 hsa-miR-638 1 0 0
chr12:55726890|55727286 hsa-miR-663a 1 0 0
chr12:55726890|55727286 hsa-miR-762 1 0 0
chr12:55726890|55727286 hsa-miR-1282 0 1 0
chr12:55726890|55727286 hsa-miR-2278 0 1 0
chr12:55726890|55727286 hsa-miR-2861 1 0 0
chr12:55726890|55727286 hsa-miR-3131 1 0 0
chr12:55726890|55727286 hsa-miR-3141 1 0 0
chr12:55726890|55727286 hsa-miR-3188 1 0 0
chr12:55726890|55727286 hsa-miR-4296 1 0 0
chr12:55726890|55727286 hsa-miR-4322 1 1 0
chr12:55726890|55727286 hsa-miR-4259 1 1 0
chr12:55726890|55727286 hsa-miR-4327 1 1 0
chr12:55726890|55727286 hsa-miR-4265 1 1 0
chr12:55726890|55727286 hsa-miR-4270 1 0 0
chr12:55726890|55727286 hsa-miR-4281 1 0 0
chr12:55726890|55727286 hsa-miR-3945 1 0 0
chr12:55726890|55727286 hsa-miR-4437 1 1 0
chr12:55726890|55727286 hsa-miR-4456 0 1 0
chr12:55726890|55727286 hsa-miR-4458 1 0 0
chr12:55726890|55727286 hsa-miR-4466 1 0 0
chr12:55726890|55727286 hsa-miR-4467 1 0 0
chr12:55726890|55727286 hsa-miR-3689c 1 0 0
chr12:55726890|55727286 hsa-miR-4479 1 0 0
chr12:55726890|55727286 hsa-miR-4488 1 1 0
chr12:55726890|55727286 hsa-miR-4498 1 0 0
chr12:55726890|55727286 hsa-miR-4506 1 0 0
chr12:55726890|55727286 hsa-miR-4507 1 1 0
chr12:55726890|55727286 hsa-miR-4516 1 0 0
chr12:55726890|55727286 hsa-miR-4527 1 1 0
chr12:55726890|55727286 hsa-miR-1587 1 1 0
chr12:55726890|55727286 hsa-miR-4538 0 1 0
chr12:55726890|55727286 hsa-miR-4651 1 1 0
chr12:55726890|55727286 hsa-miR-4656 1 0 0
chr12:55726890|55727286 hsa-miR-4674 1 0 0
chr12:55726890|55727286 hsa-miR-4689 1 0 0
chr12:55726890|55727286 hsa-miR-4706 1 0 0
chr12:55726890|55727286 hsa-miR-4710 1 1 0
chr12:55726890|55727286 hsa-miR-4734 1 1 0
chr12:55726890|55727286 hsa-miR-4739 1 0 0
chr12:55726890|55727286 hsa-miR-4741 1 0 0
chr12:55726890|55727286 hsa-miR-5192 1 0 0
chr12:55726890|55727286 hsa-miR-5572 1 0 0
chr12:55726890|55727286 hsa-miR-5787 1 0 0
chr12:55726890|55727286 hsa-miR-6133 1 0 0
chr12:55726890|55727286 hsa-miR-6134 0 1 0
chr12:55726890|55727286 hsa-miR-8052 1 1 0
chr12:55726890|55727286 hsa-miR-12114 1 0 0
chr12:55726890|55727286 hsa-miR-6747-5p 1 0 0
chr12:55726890|55727286 hsa-miR-4433a-3p 1 0 0
chr12:55726890|55727286 hsa-miR-6765-5p 1 0 0
chr12:55726890|55727286 hsa-miR-7106-5p 1 0 0
chr12:55726890|55727286 hsa-miR-6825-5p 1 0 0
chr12:55726890|55727286 hsa-miR-6894-5p 1 0 0
chr12:55726890|55727286 hsa-miR-4687-3p 1 0 0
chr12:55726890|55727286 hsa-miR-6799-5p 1 0 0
chr12:55726890|55727286 hsa-miR-6728-5p 1 0 0
chr12:55726890|55727286 hsa-miR-8071 1 0 0
chr12:55726890|55727286 hsa-miR-6515-5p 1 0 0
chr12:55726890|55727286 hsa-miR-6880-5p 0 1 0
chr12:55726890|55727286 hsa-miR-6730-5p 1 0 0
chr12:55726890|55727286 hsa-miR-7160-5p 1 0 0
chr12:55726890|55727286 hsa-miR-6741-5p 1 0 0
chr12:55726890|55727286 hsa-miR-6759-5p 1 0 0
chr12:55726890|55727286 hsa-miR-4677-5p 0 1 0
chr12:55726890|55727286 hsa-miR-6817-3p 0 1 0
chr12:55726890|55727286 hsa-miR-6742-5p 1 0 0
chr12:55726890|55727286 hsa-miR-3180-3p 1 0 0
chr12:55726890|55727286 hsa-miR-6748-5p 1 1 0
chr12:55726890|55727286 hsa-miR-6772-5p 1 0 0
chr12:55726890|55727286 hsa-miR-6793-5p 1 0 0
chr12:55726890|55727286 hsa-miR-6796-5p 1 0 0
chr12:55726890|55727286 hsa-miR-6829-5p 1 1 0
chr12:55726890|55727286 hsa-miR-6732-5p 1 0 0
chr12:55726890|55727286 hsa-miR-6805-5p 1 1 0
chr12:55726890|55727286 hsa-miR-6798-5p 0 1 0
chr12:55726890|55727286 hsa-miR-6782-5p 1 0 0
chr12:55726890|55727286 hsa-miR-6810-5p 0 1 0
chr12:55726890|55727286 hsa-miR-7855-5p 1 0 0
chr12:55726890|55727286 hsa-miR-5006-5p 1 0 0
chr12:55726890|55727286 hsa-miR-6786-5p 1 0 0
chr12:55726890|55727286 hsa-miR-5088-5p 1 1 0
chr12:55726890|55727286 hsa-miR-6772-3p 0 1 0
chr12:55726890|55727286 hsa-miR-7109-5p 1 0 0
chr12:55726890|55727286 hsa-miR-1229-5p 1 0 0
chr12:55726890|55727286 hsa-miR-4715-3p 1 0 0
chr12:55726890|55727286 hsa-miR-3691-5p 1 0 0
chr12:55726890|55727286 hsa-miR-1228-5p 1 0 0
chr12:55726890|55727286 hsa-miR-3667-3p 1 0 0
chr12:55726890|55727286 hsa-miR-92b-5p 1 0 0
chr12:55726890|55727286 hsa-miR-3677-3p 1 0 0
chr12:55726890|55727286 hsa-miR-4717-3p 0 1 0
chr12:55726890|55727286 hsa-miR-6749-5p 1 0 0
chr12:55726890|55727286 hsa-miR-6501-5p 0 1 0
chr12:55726890|55727286 hsa-miR-4743-3p 1 1 0
chr12:55726890|55727286 hsa-miR-3648 1 0 0
chr12:55726890|55727286 hsa-miR-4787-5p 1 0 0
chr12:55726890|55727286 hsa-miR-6789-5p 1 0 0
chr12:55726890|55727286 hsa-miR-6802-5p 1 0 0
chr12:55726890|55727286 hsa-miR-194-3p 1 0 0
chr12:55726890|55727286 hsa-miR-1184 0 1 0
chr12:55726890|55727286 hsa-miR-664b-5p 1 0 0
chr12:55726890|55727286 hsa-miR-1180-3p 1 0 0
chr12:55726890|55727286 hsa-miR-4750-5p 1 0 0
chr12:55726890|55727286 hsa-miR-6501-3p 0 1 0
chr12:55726890|55727286 hsa-miR-506-5p 1 0 0
chr12:55726890|55727286 hsa-miR-431-3p 1 0 0
chr12:55726890|55727286 hsa-miR-10400-5p 1 0 0
chr12:55726890|55727286 hsa-miR-1207-5p 1 0 0
chr12:55726890|55727286 hsa-miR-1233-5p 1 0 0
chr12:55726890|55727286 hsa-miR-3689b-3p 1 0 0
chr12:55726890|55727286 hsa-miR-6769b-5p 1 1 0
chr12:55726890|55727286 hsa-miR-6778-5p 1 0 0
chr12:55726890|55727286 hsa-miR-6812-5p 1 1 0
chr12:55726890|55727286 hsa-miR-6816-5p 1 1 0
chr12:55726890|55727286 hsa-miR-6865-5p 1 0 0
chr12:55726890|55727286 hsa-miR-6893-5p 1 0 0
chr12:55726890|55727286 hsa-miR-6775-5p 1 0 0
chr12:55726890|55727286 hsa-miR-5001-5p 1 0 0
chr12:55726890|55727286 hsa-miR-6752-5p 1 0 0
chr12:55726890|55727286 hsa-miR-6754-5p 1 0 0
chr12:55726890|55727286 hsa-miR-6756-5p 1 1 0
chr12:55726890|55727286 hsa-miR-6769a-5p 1 1 0
chr12:55726890|55727286 hsa-miR-6803-5p 1 1 0
chr12:55726890|55727286 hsa-miR-6819-5p 1 0 0
chr12:55726890|55727286 hsa-miR-6842-5p 1 1 0
chr12:55726890|55727286 hsa-miR-6851-5p 1 1 0
chr12:55726890|55727286 hsa-miR-7107-5p 1 0 0
chr12:55726890|55727286 hsa-miR-1249-5p 1 0 0
chr12:55726890|55727286 hsa-miR-6751-5p 1 0 0
chr12:55726890|55727286 hsa-miR-6779-5p 1 0 0
chr12:55726890|55727286 hsa-miR-6780a-5p 1 0 0
chr12:55726890|55727286 hsa-miR-6879-5p 1 0 0
chr12:55726890|55727286 hsa-miR-7111-5p 1 0 0
chr12:55726890|55727286 hsa-miR-3620-5p 1 1 0
chr12:55726890|55727286 hsa-miR-5196-5p 1 0 0
chr12:55726890|55727286 hsa-miR-6780b-5p 1 0 0
chr12:55726890|55727286 hsa-miR-6862-5p 1 0 0
chr12:55726890|55727286 hsa-miR-10396a-5p 1 0 0
chr12:55726890|55727286 hsa-miR-10396b-5p 1 0 0
chr12:55726890|55727286 hsa-miR-1237-5p 1 1 0
chr12:55726890|55727286 hsa-miR-3689a-3p 1 0 0
chr12:55726890|55727286 hsa-miR-4632-5p 1 1 0
chr12:55726890|55727286 hsa-miR-4649-5p 1 0 0
chr12:55726890|55727286 hsa-miR-4701-3p 1 1 0
chr12:55726890|55727286 hsa-miR-4725-3p 1 0 0
chr12:55726890|55727286 hsa-miR-4745-5p 1 0 0
chr12:55726890|55727286 hsa-miR-4749-5p 1 0 0
chr12:55726890|55727286 hsa-miR-6729-5p 1 0 0
chr12:55726890|55727286 hsa-miR-6735-5p 1 0 0
chr12:55726890|55727286 hsa-miR-6846-5p 1 0 0
chr12:55726890|55727286 hsa-miR-6848-5p 1 0 0
chr12:55726890|55727286 hsa-miR-6858-5p 1 0 0
chr12:55726890|55727286 hsa-miR-6883-5p 1 0 0
chr12:55726890|55727286 hsa-miR-4697-5p 1 0 0
chr12:55726890|55727286 hsa-miR-939-5p 1 0 0
chr12:55726890|55727286 hsa-miR-3199 1 1 0
chr12:55726890|55727286 hsa-miR-4758-5p 1 0 0
chr12:55726890|55727286 hsa-miR-365b-5p 1 0 0
chr12:55726890|55727286 hsa-miR-6511b-5p 1 0 0
chr12:55726890|55727286 hsa-miR-3940-5p 1 1 0
chr12:55726890|55727286 hsa-miR-6736-5p 1 1 0
chr12:55726890|55727286 hsa-miR-4646-5p 1 0 0
chr12:55726890|55727286 hsa-miR-6891-5p 1 0 0
chr12:55726890|55727286 hsa-miR-6766-5p 1 1 0
chr12:55726890|55727286 hsa-miR-6762-5p 1 0 0
chr12:55726890|55727286 hsa-miR-10400-3p 1 0 0
chr12:55726890|55727286 hsa-miR-4676-5p 1 0 0
chr12:55726890|55727286 hsa-miR-6504-5p 0 1 0
chr12:55726890|55727286 hsa-miR-1912-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr12:55726890|55727286
ORF Type ORF1
Protein Length 107
Nucleotide Length 321
Protein Sequence MQEQRTEVKFGVYALQGPVLAQPVPGHSQRSSSPTHLTHLPEPEPSCSGSPRPPMLVPPPTHRDHKTIVLLAGPAAAHKSHQEEEDTHCDDDHWQQRARGSPLDYGL
Nucleotide Sequence CTGCAGGAGCAAAGGACAGAAGTCAAGTTTGGAGTCTATGCATTACAGGGGCCCGTTTTGGCACAGCCGGTCCCTGGACACTCACAAAGGTCTTCCTCACCCACCCACCTCACCCACCTTCCTGAGCCCGAACCAAGCTGCTCTGGCAGTCCCAGACCGCCCATGTTGGTCCCGCCCCCAACTCACCGTGATCATAAGACAATAGTTCTCCTTGCAGGCCCCGCAGCAGCCCACAAAAGCCACCAGGAAGAGGAAGACACCCACTGCGATGATGACCACTGGCAACAGAGAGCCAGGGGTAGCCCCCTGGATTATGGTCTG

CircID chr12:55726890|55727286
ORF Type ORF2
Protein Length 84
Nucleotide Length 255
Protein Sequence MAAATSTNMIRDRKMANCRSKGQKSSLESMHYRGPFWHSRSLDTHKGLPHPPTSPTFLSPNQAALAVPDRPCWSRPQLTVIIRQ
Nucleotide Sequence ATGGCTGCGGCCACCTCCACCAACATGATAAGAGACAGAAAGATGGCAAACTGCAGGAGCAAAGGACAGAAGTCAAGTTTGGAGTCTATGCATTACAGGGGCCCGTTTTGGCACAGCCGGTCCCTGGACACTCACAAAGGTCTTCCTCACCCACCCACCTCACCCACCTTCCTGAGCCCGAACCAAGCTGCTCTGGCAGTCCCAGACCGCCCATGTTGGTCCCGCCCCCAACTCACCGTGATCATAAGACAATAG

CircID chr12:55726890|55727286
ORF Type ORF3
Protein Length 36
Nucleotide Length 111
Protein Sequence MQAPQQPTKATRKRKTPTAMMTTGNREPGVAPWIMV
Nucleotide Sequence TTGCAGGCCCCGCAGCAGCCCACAAAAGCCACCAGGAAGAGGAAGACACCCACTGCGATGATGACCACTGGCAACAGAGAGCCAGGGGTAGCCCCCTGGATTATGGTCTGA

CircID chr12:55726890|55727286
ORF Type ORF4
Protein Length 39
Nucleotide Length 120
Protein Sequence MLRGLQGELLSYDHGELGAGPTWAVWDCQSSLVRAQEGG
Nucleotide Sequence CTGCTGCGGGGCCTGCAAGGAGAACTATTGTCTTATGATCACGGTGAGTTGGGGGCGGGACCAACATGGGCGGTCTGGGACTGCCAGAGCAGCTTGGTTCGGGCTCAGGAAGGTGGGTGA

CircID chr12:55726890|55727286
ORF Type ORF5
Protein Length 28
Nucleotide Length 87
Protein Sequence MSFAPAVCHLSVSYHVGGGGRSHCWLCV
Nucleotide Sequence CTGTCCTTTGCTCCTGCAGTTTGCCATCTTTCTGTCTCTTATCATGTTGGTGGAGGTGGCCGCAGCCATTGCTGGCTATGTGTTTAG

CircID chr12:55726890|55727286
ORF Type ORF6
Protein Length 63
Nucleotide Length 192
Protein Sequence MLPVVIIAVGVFLFLVAFVGCCGACKENYCLMITVSWGRDQHGRSGTARAAWFGLRKVGEVGG
Nucleotide Sequence CTGTTGCCAGTGGTCATCATCGCAGTGGGTGTCTTCCTCTTCCTGGTGGCTTTTGTGGGCTGCTGCGGGGCCTGCAAGGAGAACTATTGTCTTATGATCACGGTGAGTTGGGGGCGGGACCAACATGGGCGGTCTGGGACTGCCAGAGCAGCTTGGTTCGGGCTCAGGAAGGTGGGTGAGGTGGGTGGGTGA

CircID chr12:55726890|55727286
ORF Type ORF7
Protein Length 29
Nucleotide Length 87
Protein Sequence MLLQFAIFLSLIMLVEVAAAIAGYVFRDK
Nucleotide Sequence TTGCTCCTGCAGTTTGCCATCTTTCTGTCTCTTATCATGTTGGTGGAGGTGGCCGCAGCCATTGCTGGCTATGTGTTTAGAGATAAG

CircID chr12:55726890|55727286
ORF Type ORF8
Protein Length 34
Nucleotide Length 105
Protein Sequence MALCCQWSSSQWVSSSSWWLLWAAAGPARRTIVL
Nucleotide Sequence CTGGCTCTCTGTTGCCAGTGGTCATCATCGCAGTGGGTGTCTTCCTCTTCCTGGTGGCTTTTGTGGGCTGCTGCGGGGCCTGCAAGGAGAACTATTGTCTTATGA

CircID chr12:55726890|55727286
ORF Type ORF9
Protein Length 42
Nucleotide Length 129
Protein Sequence MGGLGLPEQLGSGSGRWVRWVGEEDLCECPGTGCAKTGPCNA
Nucleotide Sequence ATGGGCGGTCTGGGACTGCCAGAGCAGCTTGGTTCGGGCTCAGGAAGGTGGGTGAGGTGGGTGGGTGAGGAAGACCTTTGTGAGTGTCCAGGGACCGGCTGTGCCAAAACGGGCCCCTGTAATGCATAG

CircID chr12:55726890|55727286
ORF Type ORF10
Protein Length 33
Nucleotide Length 99
Protein Sequence MTSVLCSCSLPSFCLLSCWWRWPQPLLAMCLEI
Nucleotide Sequence TTGACTTCTGTCCTTTGCTCCTGCAGTTTGCCATCTTTCTGTCTCTTATCATGTTGGTGGAGGTGGCCGCAGCCATTGCTGGCTATGTGTTTAGAGATA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites