CircRNA Information

General Information
circRNA Basic Information
CircID chr12:55726905|55727282
Strand -
CircType exon
Host Gene ENSG00000135404.10;
Algorism CIRI2;
Sequence ATAGCCAGCAATGGCTGCGGCCACCTCCACCAACATGATAAGAGACAGAAAGATGGCAAACTGCAGGAGCAAAGGACAGAAGTCAAGTTTGGAGTCTATGCATTACAGGGGCCCGTTTTGGCACAGCCGGTCCCTGGACACTCACAAAGGTCTTCCTCACCCACCCACCTCACCCACCTTCCTGAGCCCGAACCAAGCTGCTCTGGCAGTCCCAGACCGCCCATGTTGGTCCCGCCCCCAACTCACCGTGATCATAAGACAATAGTTCTCCTTGCAGGCCCCGCAGCAGCCCACAAAAGCCACCAGGAAGAGGAAGACACCCACTGCGATGATGACCACTGGCAACAGAGAGCCAGGGGTAGCCCCCTGGATTATGGT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:55726905|55727282 hsa-miR-198 0 0 1
chr12:55726905|55727282 hsa-miR-146a-5p 0 0 1
chr12:55726905|55727282 hsa-miR-146a-3p 0 0 1
chr12:55726905|55727282 hsa-miR-149-5p 0 0 1
chr12:55726905|55727282 hsa-miR-149-3p 0 0 1
chr12:55726905|55727282 hsa-miR-511-5p 0 0 1
chr12:55726905|55727282 hsa-miR-511-3p 0 0 1
chr12:55726905|55727282 hsa-miR-571 0 0 1
chr12:55726905|55727282 hsa-miR-593-5p 0 0 1
chr12:55726905|55727282 hsa-miR-593-3p 0 0 1
chr12:55726905|55727282 hsa-miR-609 1 0 1
chr12:55726905|55727282 hsa-miR-617 0 0 1
chr12:55726905|55727282 hsa-miR-646 0 0 1
chr12:55726905|55727282 hsa-miR-659-5p 0 0 1
chr12:55726905|55727282 hsa-miR-659-3p 0 0 1
chr12:55726905|55727282 hsa-miR-758-5p 0 0 1
chr12:55726905|55727282 hsa-miR-758-3p 0 0 1
chr12:55726905|55727282 hsa-miR-744-5p 0 0 1
chr12:55726905|55727282 hsa-miR-744-3p 0 0 1
chr12:55726905|55727282 hsa-miR-873-5p 0 0 1
chr12:55726905|55727282 hsa-miR-873-3p 0 0 1
chr12:55726905|55727282 hsa-miR-760 1 0 1
chr12:55726905|55727282 hsa-miR-1227-5p 0 0 1
chr12:55726905|55727282 hsa-miR-1227-3p 0 0 1
chr12:55726905|55727282 hsa-miR-1236-5p 0 0 1
chr12:55726905|55727282 hsa-miR-1236-3p 0 0 1
chr12:55726905|55727282 hsa-miR-1202 1 0 1
chr12:55726905|55727282 hsa-miR-1293 1 0 1
chr12:55726905|55727282 hsa-miR-1294 0 0 1
chr12:55726905|55727282 hsa-miR-1262 0 0 1
chr12:55726905|55727282 hsa-miR-1267 0 0 1
chr12:55726905|55727282 hsa-miR-1275 0 0 1
chr12:55726905|55727282 hsa-miR-1288-5p 0 0 1
chr12:55726905|55727282 hsa-miR-1288-3p 0 0 1
chr12:55726905|55727282 hsa-miR-296-5p 0 0 1
chr12:55726905|55727282 hsa-miR-574-5p 0 0 1
chr12:55726905|55727282 hsa-miR-331-3p 0 0 1
chr12:55726905|55727282 hsa-miR-146b-5p 0 0 1
chr12:55726905|55727282 hsa-miR-7 0 0 1
chr12:55726905|55727282 hsa-miR-153 0 0 1
chr12:55726905|55727282 hsa-miR-24 0 0 1
chr12:55726905|55727282 hsa-miR-219-1-3p 0 0 1
chr12:55726905|55727282 hsa-miR-601 1 0 0
chr12:55726905|55727282 hsa-miR-608 1 0 0
chr12:55726905|55727282 hsa-miR-637 1 0 0
chr12:55726905|55727282 hsa-miR-638 1 0 0
chr12:55726905|55727282 hsa-miR-663a 1 0 0
chr12:55726905|55727282 hsa-miR-762 1 0 0
chr12:55726905|55727282 hsa-miR-663b 1 0 0
chr12:55726905|55727282 hsa-miR-1282 1 0 0
chr12:55726905|55727282 hsa-miR-2861 1 0 0
chr12:55726905|55727282 hsa-miR-3131 1 0 0
chr12:55726905|55727282 hsa-miR-3141 1 0 0
chr12:55726905|55727282 hsa-miR-3188 1 0 0
chr12:55726905|55727282 hsa-miR-4296 1 0 0
chr12:55726905|55727282 hsa-miR-4322 1 0 0
chr12:55726905|55727282 hsa-miR-4259 1 0 0
chr12:55726905|55727282 hsa-miR-4327 1 0 0
chr12:55726905|55727282 hsa-miR-4265 1 0 0
chr12:55726905|55727282 hsa-miR-4270 1 0 0
chr12:55726905|55727282 hsa-miR-4281 1 0 0
chr12:55726905|55727282 hsa-miR-3945 1 0 0
chr12:55726905|55727282 hsa-miR-4437 1 0 0
chr12:55726905|55727282 hsa-miR-4458 1 0 0
chr12:55726905|55727282 hsa-miR-4466 1 0 0
chr12:55726905|55727282 hsa-miR-4467 1 0 0
chr12:55726905|55727282 hsa-miR-3689c 1 0 0
chr12:55726905|55727282 hsa-miR-4479 1 0 0
chr12:55726905|55727282 hsa-miR-4488 1 0 0
chr12:55726905|55727282 hsa-miR-4498 1 0 0
chr12:55726905|55727282 hsa-miR-4506 1 0 0
chr12:55726905|55727282 hsa-miR-4507 1 0 0
chr12:55726905|55727282 hsa-miR-4516 1 0 0
chr12:55726905|55727282 hsa-miR-4527 1 0 0
chr12:55726905|55727282 hsa-miR-1587 1 0 0
chr12:55726905|55727282 hsa-miR-4651 1 0 0
chr12:55726905|55727282 hsa-miR-4656 1 0 0
chr12:55726905|55727282 hsa-miR-4674 1 0 0
chr12:55726905|55727282 hsa-miR-4689 1 0 0
chr12:55726905|55727282 hsa-miR-4706 1 0 0
chr12:55726905|55727282 hsa-miR-4710 1 0 0
chr12:55726905|55727282 hsa-miR-4734 1 0 0
chr12:55726905|55727282 hsa-miR-4739 1 0 0
chr12:55726905|55727282 hsa-miR-4741 1 0 0
chr12:55726905|55727282 hsa-miR-5192 1 0 0
chr12:55726905|55727282 hsa-miR-5572 1 0 0
chr12:55726905|55727282 hsa-miR-5787 1 0 0
chr12:55726905|55727282 hsa-miR-6133 1 0 0
chr12:55726905|55727282 hsa-miR-8052 1 0 0
chr12:55726905|55727282 hsa-miR-12114 1 0 0
chr12:55726905|55727282 hsa-miR-6747-5p 1 0 0
chr12:55726905|55727282 hsa-miR-4433a-3p 1 0 0
chr12:55726905|55727282 hsa-miR-6765-5p 1 0 0
chr12:55726905|55727282 hsa-miR-7106-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6825-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6894-5p 1 0 0
chr12:55726905|55727282 hsa-miR-4687-3p 1 0 0
chr12:55726905|55727282 hsa-miR-6799-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6728-5p 1 0 0
chr12:55726905|55727282 hsa-miR-8071 1 0 0
chr12:55726905|55727282 hsa-miR-6515-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6730-5p 1 0 0
chr12:55726905|55727282 hsa-miR-7160-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6741-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6759-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6742-5p 1 0 0
chr12:55726905|55727282 hsa-miR-3180-3p 1 0 0
chr12:55726905|55727282 hsa-miR-6748-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6772-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6793-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6796-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6829-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6732-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6805-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6782-5p 1 0 0
chr12:55726905|55727282 hsa-miR-7855-5p 1 0 0
chr12:55726905|55727282 hsa-miR-5006-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6786-5p 1 0 0
chr12:55726905|55727282 hsa-miR-5088-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6772-3p 1 0 0
chr12:55726905|55727282 hsa-miR-7109-5p 1 0 0
chr12:55726905|55727282 hsa-miR-1229-5p 1 0 0
chr12:55726905|55727282 hsa-miR-4715-3p 1 0 0
chr12:55726905|55727282 hsa-miR-3691-5p 1 0 0
chr12:55726905|55727282 hsa-miR-1228-5p 1 0 0
chr12:55726905|55727282 hsa-miR-3667-3p 1 0 0
chr12:55726905|55727282 hsa-miR-92b-5p 1 0 0
chr12:55726905|55727282 hsa-miR-3677-3p 1 0 0
chr12:55726905|55727282 hsa-miR-6749-5p 1 0 0
chr12:55726905|55727282 hsa-miR-4743-3p 1 0 0
chr12:55726905|55727282 hsa-miR-3648 1 0 0
chr12:55726905|55727282 hsa-miR-4787-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6789-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6802-5p 1 0 0
chr12:55726905|55727282 hsa-miR-194-3p 1 0 0
chr12:55726905|55727282 hsa-miR-664b-5p 1 0 0
chr12:55726905|55727282 hsa-miR-1180-3p 1 0 0
chr12:55726905|55727282 hsa-miR-4750-5p 1 0 0
chr12:55726905|55727282 hsa-miR-506-5p 1 0 0
chr12:55726905|55727282 hsa-miR-431-3p 1 0 0
chr12:55726905|55727282 hsa-miR-431-5p 1 0 0
chr12:55726905|55727282 hsa-miR-598-3p 1 0 0
chr12:55726905|55727282 hsa-miR-10400-5p 1 0 0
chr12:55726905|55727282 hsa-miR-1207-5p 1 0 0
chr12:55726905|55727282 hsa-miR-1233-5p 1 0 0
chr12:55726905|55727282 hsa-miR-3689b-3p 1 0 0
chr12:55726905|55727282 hsa-miR-6769b-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6778-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6812-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6816-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6865-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6893-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6775-5p 1 0 0
chr12:55726905|55727282 hsa-miR-5001-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6737-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6752-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6754-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6756-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6769a-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6803-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6819-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6842-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6851-5p 1 0 0
chr12:55726905|55727282 hsa-miR-7107-5p 1 0 0
chr12:55726905|55727282 hsa-miR-1249-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6751-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6779-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6780a-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6879-5p 1 0 0
chr12:55726905|55727282 hsa-miR-7111-5p 1 0 0
chr12:55726905|55727282 hsa-miR-3620-5p 1 0 0
chr12:55726905|55727282 hsa-miR-5196-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6780b-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6862-5p 1 0 0
chr12:55726905|55727282 hsa-miR-10396a-5p 1 0 0
chr12:55726905|55727282 hsa-miR-10396b-5p 1 0 0
chr12:55726905|55727282 hsa-miR-1237-5p 1 0 0
chr12:55726905|55727282 hsa-miR-3689a-3p 1 0 0
chr12:55726905|55727282 hsa-miR-4632-5p 1 0 0
chr12:55726905|55727282 hsa-miR-4649-5p 1 0 0
chr12:55726905|55727282 hsa-miR-4701-3p 1 0 0
chr12:55726905|55727282 hsa-miR-4725-3p 1 0 0
chr12:55726905|55727282 hsa-miR-4745-5p 1 0 0
chr12:55726905|55727282 hsa-miR-4749-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6729-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6735-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6846-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6848-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6858-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6883-5p 1 0 0
chr12:55726905|55727282 hsa-miR-4697-5p 1 0 0
chr12:55726905|55727282 hsa-miR-939-5p 1 0 0
chr12:55726905|55727282 hsa-miR-3199 1 0 0
chr12:55726905|55727282 hsa-miR-4758-5p 1 0 0
chr12:55726905|55727282 hsa-miR-365b-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6511b-5p 1 0 0
chr12:55726905|55727282 hsa-miR-3940-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6736-5p 1 0 0
chr12:55726905|55727282 hsa-miR-4646-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6891-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6766-5p 1 0 0
chr12:55726905|55727282 hsa-miR-6762-5p 1 0 0
chr12:55726905|55727282 hsa-miR-10400-3p 1 0 0
chr12:55726905|55727282 hsa-miR-4676-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr12:55726905|55727282
ORF Type ORF1
Protein Length 106
Nucleotide Length 318
Protein Sequence MQEQRTEVKFGVYALQGPVLAQPVPGHSQRSSSPTHLTHLPEPEPSCSGSPRPPMLVPPPTHRDHKTIVLLAGPAAAHKSHQEEEDTHCDDDHWQQRARGSPLDYG
Nucleotide Sequence CTGCAGGAGCAAAGGACAGAAGTCAAGTTTGGAGTCTATGCATTACAGGGGCCCGTTTTGGCACAGCCGGTCCCTGGACACTCACAAAGGTCTTCCTCACCCACCCACCTCACCCACCTTCCTGAGCCCGAACCAAGCTGCTCTGGCAGTCCCAGACCGCCCATGTTGGTCCCGCCCCCAACTCACCGTGATCATAAGACAATAGTTCTCCTTGCAGGCCCCGCAGCAGCCCACAAAAGCCACCAGGAAGAGGAAGACACCCACTGCGATGATGACCACTGGCAACAGAGAGCCAGGGGTAGCCCCCTGGATTATGGT

CircID chr12:55726905|55727282
ORF Type ORF2
Protein Length 84
Nucleotide Length 255
Protein Sequence MAAATSTNMIRDRKMANCRSKGQKSSLESMHYRGPFWHSRSLDTHKGLPHPPTSPTFLSPNQAALAVPDRPCWSRPQLTVIIRQ
Nucleotide Sequence ATGGCTGCGGCCACCTCCACCAACATGATAAGAGACAGAAAGATGGCAAACTGCAGGAGCAAAGGACAGAAGTCAAGTTTGGAGTCTATGCATTACAGGGGCCCGTTTTGGCACAGCCGGTCCCTGGACACTCACAAAGGTCTTCCTCACCCACCCACCTCACCCACCTTCCTGAGCCCGAACCAAGCTGCTCTGGCAGTCCCAGACCGCCCATGTTGGTCCCGCCCCCAACTCACCGTGATCATAAGACAATAG

CircID chr12:55726905|55727282
ORF Type ORF3
Protein Length 35
Nucleotide Length 105
Protein Sequence MQAPQQPTKATRKRKTPTAMMTTGNREPGVAPWIM
Nucleotide Sequence TTGCAGGCCCCGCAGCAGCCCACAAAAGCCACCAGGAAGAGGAAGACACCCACTGCGATGATGACCACTGGCAACAGAGAGCCAGGGGTAGCCCCCTGGATTATG

CircID chr12:55726905|55727282
ORF Type ORF4
Protein Length 63
Nucleotide Length 192
Protein Sequence MLPVVIIAVGVFLFLVAFVGCCGACKENYCLMITVSWGRDQHGRSGTARAAWFGLRKVGEVGG
Nucleotide Sequence CTGTTGCCAGTGGTCATCATCGCAGTGGGTGTCTTCCTCTTCCTGGTGGCTTTTGTGGGCTGCTGCGGGGCCTGCAAGGAGAACTATTGTCTTATGATCACGGTGAGTTGGGGGCGGGACCAACATGGGCGGTCTGGGACTGCCAGAGCAGCTTGGTTCGGGCTCAGGAAGGTGGGTGAGGTGGGTGGGTGA

CircID chr12:55726905|55727282
ORF Type ORF5
Protein Length 34
Nucleotide Length 105
Protein Sequence MALCCQWSSSQWVSSSSWWLLWAAAGPARRTIVL
Nucleotide Sequence CTGGCTCTCTGTTGCCAGTGGTCATCATCGCAGTGGGTGTCTTCCTCTTCCTGGTGGCTTTTGTGGGCTGCTGCGGGGCCTGCAAGGAGAACTATTGTCTTATGA

CircID chr12:55726905|55727282
ORF Type ORF6
Protein Length 42
Nucleotide Length 129
Protein Sequence MGGLGLPEQLGSGSGRWVRWVGEEDLCECPGTGCAKTGPCNA
Nucleotide Sequence ATGGGCGGTCTGGGACTGCCAGAGCAGCTTGGTTCGGGCTCAGGAAGGTGGGTGAGGTGGGTGGGTGAGGAAGACCTTTGTGAGTGTCCAGGGACCGGCTGTGCCAAAACGGGCCCCTGTAATGCATAG

CircID chr12:55726905|55727282
ORF Type ORF7
Protein Length 28
Nucleotide Length 84
Protein Sequence MTSVLCSCSLPSFCLLSCWWRWPQPLLA
Nucleotide Sequence TTGACTTCTGTCCTTTGCTCCTGCAGTTTGCCATCTTTCTGTCTCTTATCATGTTGGTGGAGGTGGCCGCAGCCATTGCTGGCT

CircID chr12:55726905|55727282
ORF Type ORF8
Protein Length 39
Nucleotide Length 120
Protein Sequence MLRGLQGELLSYDHGELGAGPTWAVWDCQSSLVRAQEGG
Nucleotide Sequence CTGCTGCGGGGCCTGCAAGGAGAACTATTGTCTTATGATCACGGTGAGTTGGGGGCGGGACCAACATGGGCGGTCTGGGACTGCCAGAGCAGCTTGGTTCGGGCTCAGGAAGGTGGGTGA

CircID chr12:55726905|55727282
ORF Type ORF9
Protein Length 26
Nucleotide Length 78
Protein Sequence MSFAPAVCHLSVSYHVGGGGRSHCWL
Nucleotide Sequence CTGTCCTTTGCTCCTGCAGTTTGCCATCTTTCTGTCTCTTATCATGTTGGTGGAGGTGGCCGCAGCCATTGCTGGCTA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites