CircNet

General Information

circRNA Basic Information

CircID	chr12:55830538\|55830748
Strand	+
CircType	exon
Host Gene	ENSG00000135392.14;
Algorism	CIRI2;
Sequence	CCAGGTTGCCTACTGCTCTAGTCCAGGACCAGAGACCCCCAACTATATAGCAGGTAAGAGTCTTGAGGGTCACCCCAAGAGTTTTGGAGAAGGGTCTCCGAATACTTAGGAGATGACAACCGGAAGCTCTCAAAGCCCCAATAGGGGTCCCAGCGCCCCCCTAGCTTCAGCTTGGTTTCTTCCACTTTCCAGAGAATTGGAGTATTGTCTC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr12:55830538\|55830748	hsa-miR-326	-2	0	1
chr12:55830538\|55830748	hsa-miR-422a	-20	1	1
chr12:55830538\|55830748	hsa-miR-504-5p	0	0	1
chr12:55830538\|55830748	hsa-miR-504-3p	0	0	1
chr12:55830538\|55830748	hsa-miR-593-5p	0	0	1
chr12:55830538\|55830748	hsa-miR-593-3p	0	0	1
chr12:55830538\|55830748	hsa-miR-608	-13	0	1
chr12:55830538\|55830748	hsa-miR-635	0	0	1
chr12:55830538\|55830748	hsa-miR-1323	-2	0	1
chr12:55830538\|55830748	hsa-miR-1299	-8	0	1
chr12:55830538\|55830748	hsa-miR-548o-3p	0	0	1
chr12:55830538\|55830748	hsa-miR-1275	-9	0	1
chr12:55830538\|55830748	hsa-miR-548o	0	0	1
chr12:55830538\|55830748	hsa-miR-127-5p	-9	1	1
chr12:55830538\|55830748	hsa-miR-490-3p	-4	0	1
chr12:55830538\|55830748	hsa-miR-508-5p	-4	0	1
chr12:55830538\|55830748	hsa-miR-671-3p	-11	0	1
chr12:55830538\|55830748	hsa-miR-875-3p	-5	0	1
chr12:55830538\|55830748	hsa-miR-342-5p	-7	0	1
chr12:55830538\|55830748	hsa-miR-330-5p	-12	0	1
chr12:55830538\|55830748	hsa-miR-515-5p	0	0	1
chr12:55830538\|55830748	hsa-miR-7	0	0	1
chr12:55830538\|55830748	hsa-miR-378	0	0	1
chr12:55830538\|55830748	hsa-miR-453	0	0	1
chr12:55830538\|55830748	hsa-miR-2278	0	1	0
chr12:55830538\|55830748	hsa-miR-378b	-14	1	0
chr12:55830538\|55830748	hsa-miR-378c	-17	1	0
chr12:55830538\|55830748	hsa-miR-4259	-17	1	0
chr12:55830538\|55830748	hsa-miR-378e	-15	1	0
chr12:55830538\|55830748	hsa-miR-378f	-14	1	0
chr12:55830538\|55830748	hsa-miR-4496	-12	1	0
chr12:55830538\|55830748	hsa-miR-378i	-18	1	0
chr12:55830538\|55830748	hsa-miR-3978	-6	1	0
chr12:55830538\|55830748	hsa-miR-3150a-3p	-17	1	0
chr12:55830538\|55830748	hsa-miR-3190-3p	-8	1	0
chr12:55830538\|55830748	hsa-miR-193b-5p	-22	1	0
chr12:55830538\|55830748	hsa-miR-3690	-16	1	0
chr12:55830538\|55830748	hsa-miR-7152-3p	-21	1	0
chr12:55830538\|55830748	hsa-miR-4664-3p	-10	1	0
chr12:55830538\|55830748	hsa-miR-5088-3p	-10	1	0
chr12:55830538\|55830748	hsa-miR-518c-5p	-11	1	0
chr12:55830538\|55830748	hsa-miR-6803-5p	-22	1	0
chr12:55830538\|55830748	hsa-miR-328-5p	-20	1	0
chr12:55830538\|55830748	hsa-miR-4697-5p	-9	1	0
chr12:55830538\|55830748	hsa-miR-6885-5p	-10	1	0
chr12:55830538\|55830748	hsa-miR-6739-5p	0	1	0
chr12:55830538\|55830748	hsa-miR-378a-3p	-21	1	0
chr12:55830538\|55830748	hsa-miR-5195-3p	-21	1	0
chr12:55830538\|55830748	hsa-miR-6824-3p	-8	1	0
chr12:55830538\|55830748	hsa-miR-378d	-14	1	0
chr12:55830538\|55830748	hsa-miR-6764-3p	-8	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr12:55830538\|55830748
ORF Type	ORF1
Protein Length	33
Nucleotide Length	99
Protein Sequence	MTTGSSQSPNRGPSAPLASAWFLPLSRELEYCL
Nucleotide Sequence	ATGACAACCGGAAGCTCTCAAAGCCCCAATAGGGGTCCCAGCGCCCCCCTAGCTTCAGCTTGGTTTCTTCCACTTTCCAGAGAATTGGAGTATTGTCTC

CircID	chr12:55830538\|55830748
ORF Type	ORF2
Protein Length	44
Nucleotide Length	132
Protein Sequence	MRASGCHLLSIRRPFSKTLGVTLKTLTCYIVGGLWSWTRAVGNL
Nucleotide Sequence	TTGAGAGCTTCCGGTTGTCATCTCCTAAGTATTCGGAGACCCTTCTCCAAAACTCTTGGGGTGACCCTCAAGACTCTTACCTGCTATATAGTTGGGGGTCTCTGGTCCTGGACTAGAGCAGTAGGCAACCTG

CircID	chr12:55830538\|55830748
ORF Type	ORF3
Protein Length	50
Nucleotide Length	153
Protein Sequence	MKLGGRWDPYWGFESFRLSSPKYSETLLQNSWGDPQDSYLLYSWGSLVLD
Nucleotide Sequence	CTGAAGCTAGGGGGGCGCTGGGACCCCTATTGGGGCTTTGAGAGCTTCCGGTTGTCATCTCCTAAGTATTCGGAGACCCTTCTCCAAAACTCTTGGGGTGACCCTCAAGACTCTTACCTGCTATATAGTTGGGGGTCTCTGGTCCTGGACTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information