CircRNA Information

General Information
circRNA Basic Information
CircID chr12:55901539|55901785
Strand -
CircType exon
Host Gene ENSG00000170473.15;
Algorism CIRI2;
Sequence TCCCTCTACCCTCAGCCTCAGTTCTCCAAGAGATTCCCACCCACCTGATTTTCTTTTAAACAAGACACCCAAATCAGCAGCAAAGGTACCTGGGGTAGTCACTGAGATTTTGAACACTGGGAATGGGAGGGGGAAAGTCCAAAAAGTAGAAGTTGGGAAGAAAAGGGAAGGATTGAGGGAGACGCTAGGCTCTGGAGGACAGAGCTGGGCCGCAGGAGGTGGAAGTAAGCCAGTATGGGGGGTACCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:55901539|55901785 hsa-miR-204-5p 0 0 1
chr12:55901539|55901785 hsa-miR-204-3p 0 0 1
chr12:55901539|55901785 hsa-miR-211-5p 0 0 1
chr12:55901539|55901785 hsa-miR-211-3p 0 0 1
chr12:55901539|55901785 hsa-miR-216a-5p 0 0 1
chr12:55901539|55901785 hsa-miR-216a-3p 0 0 1
chr12:55901539|55901785 hsa-miR-146a-5p 0 0 1
chr12:55901539|55901785 hsa-miR-146a-3p 0 0 1
chr12:55901539|55901785 hsa-miR-431-5p 0 0 1
chr12:55901539|55901785 hsa-miR-431-3p 0 0 1
chr12:55901539|55901785 hsa-miR-432-5p 0 0 1
chr12:55901539|55901785 hsa-miR-432-3p 0 0 1
chr12:55901539|55901785 hsa-miR-193b-5p 0 0 1
chr12:55901539|55901785 hsa-miR-193b-3p 0 0 1
chr12:55901539|55901785 hsa-miR-609 0 0 1
chr12:55901539|55901785 hsa-miR-620 0 0 1
chr12:55901539|55901785 hsa-miR-623 0 0 1
chr12:55901539|55901785 hsa-miR-892b 1 0 1
chr12:55901539|55901785 hsa-miR-216b-5p 0 0 1
chr12:55901539|55901785 hsa-miR-216b-3p 0 0 1
chr12:55901539|55901785 hsa-miR-1293 1 0 1
chr12:55901539|55901785 hsa-miR-1262 0 0 1
chr12:55901539|55901785 hsa-miR-1270 0 0 1
chr12:55901539|55901785 hsa-miR-125a-3p 0 0 1
chr12:55901539|55901785 hsa-miR-485-5p 0 0 1
chr12:55901539|55901785 hsa-miR-199a-5p 1 1 1
chr12:55901539|55901785 hsa-miR-525-5p 0 0 1
chr12:55901539|55901785 hsa-miR-199b-5p 0 1 1
chr12:55901539|55901785 hsa-miR-520a-5p 0 0 1
chr12:55901539|55901785 hsa-miR-146b-5p 0 1 1
chr12:55901539|55901785 hsa-miR-193a-3p 0 0 1
chr12:55901539|55901785 hsa-miR-1269 0 0 1
chr12:55901539|55901785 hsa-miR-500 0 0 1
chr12:55901539|55901785 hsa-miR-638 1 0 0
chr12:55901539|55901785 hsa-miR-1470 1 0 0
chr12:55901539|55901785 hsa-miR-1913 1 0 0
chr12:55901539|55901785 hsa-miR-4255 0 1 0
chr12:55901539|55901785 hsa-miR-4276 0 1 0
chr12:55901539|55901785 hsa-miR-3909 1 1 0
chr12:55901539|55901785 hsa-miR-3911 1 0 0
chr12:55901539|55901785 hsa-miR-3929 0 1 0
chr12:55901539|55901785 hsa-miR-3943 1 0 0
chr12:55901539|55901785 hsa-miR-4507 1 0 0
chr12:55901539|55901785 hsa-miR-4641 1 0 0
chr12:55901539|55901785 hsa-miR-4651 1 0 0
chr12:55901539|55901785 hsa-miR-4656 0 1 0
chr12:55901539|55901785 hsa-miR-5190 0 1 0
chr12:55901539|55901785 hsa-miR-5193 1 0 0
chr12:55901539|55901785 hsa-miR-8058 0 1 0
chr12:55901539|55901785 hsa-miR-9718 1 0 0
chr12:55901539|55901785 hsa-miR-11399 1 0 0
chr12:55901539|55901785 hsa-miR-6749-3p 1 0 0
chr12:55901539|55901785 hsa-miR-92a-2-5p 0 1 0
chr12:55901539|55901785 hsa-miR-6840-3p 1 0 0
chr12:55901539|55901785 hsa-miR-4726-3p 0 1 0
chr12:55901539|55901785 hsa-miR-4687-3p 1 0 0
chr12:55901539|55901785 hsa-miR-6892-3p 1 0 0
chr12:55901539|55901785 hsa-miR-6881-3p 1 0 0
chr12:55901539|55901785 hsa-miR-150-5p 1 0 0
chr12:55901539|55901785 hsa-miR-7847-3p 1 0 0
chr12:55901539|55901785 hsa-miR-6741-5p 1 0 0
chr12:55901539|55901785 hsa-miR-6873-3p 1 1 0
chr12:55901539|55901785 hsa-miR-4728-3p 1 0 0
chr12:55901539|55901785 hsa-miR-7110-3p 1 1 0
chr12:55901539|55901785 hsa-miR-1915-5p 1 0 0
chr12:55901539|55901785 hsa-miR-6832-3p 1 1 0
chr12:55901539|55901785 hsa-miR-6716-5p 1 0 0
chr12:55901539|55901785 hsa-miR-6748-5p 1 1 0
chr12:55901539|55901785 hsa-miR-6793-5p 1 0 0
chr12:55901539|55901785 hsa-miR-877-3p 1 0 0
chr12:55901539|55901785 hsa-miR-4697-3p 1 0 0
chr12:55901539|55901785 hsa-miR-6774-3p 1 0 0
chr12:55901539|55901785 hsa-miR-6740-3p 1 0 0
chr12:55901539|55901785 hsa-miR-4713-5p 1 0 0
chr12:55901539|55901785 hsa-miR-615-3p 1 1 0
chr12:55901539|55901785 hsa-miR-532-3p 1 0 0
chr12:55901539|55901785 hsa-miR-1247-5p 1 0 0
chr12:55901539|55901785 hsa-miR-1229-5p 1 0 0
chr12:55901539|55901785 hsa-miR-5001-3p 1 0 0
chr12:55901539|55901785 hsa-miR-6757-3p 1 0 0
chr12:55901539|55901785 hsa-miR-5580-5p 1 0 0
chr12:55901539|55901785 hsa-miR-7113-3p 1 0 0
chr12:55901539|55901785 hsa-miR-6501-5p 1 0 0
chr12:55901539|55901785 hsa-miR-6809-3p 1 0 0
chr12:55901539|55901785 hsa-miR-4446-5p 1 1 0
chr12:55901539|55901785 hsa-miR-149-3p 1 0 0
chr12:55901539|55901785 hsa-miR-146b-3p 1 0 0
chr12:55901539|55901785 hsa-miR-4640-3p 1 0 0
chr12:55901539|55901785 hsa-miR-4646-3p 1 0 0
chr12:55901539|55901785 hsa-miR-1237-3p 1 0 0
chr12:55901539|55901785 hsa-miR-1236-3p 1 0 0
chr12:55901539|55901785 hsa-miR-660-3p 0 1 0
chr12:55901539|55901785 hsa-miR-508-5p 1 0 0
chr12:55901539|55901785 hsa-miR-6867-3p 1 1 0
chr12:55901539|55901785 hsa-miR-6887-3p 1 1 0
chr12:55901539|55901785 hsa-miR-7848-3p 1 0 0
chr12:55901539|55901785 hsa-miR-6826-3p 1 1 0
chr12:55901539|55901785 hsa-miR-5591-3p 1 0 0
chr12:55901539|55901785 hsa-miR-4749-3p 1 0 0
chr12:55901539|55901785 hsa-miR-6795-3p 1 0 0
chr12:55901539|55901785 hsa-miR-6859-3p 1 0 0
chr12:55901539|55901785 hsa-miR-6794-3p 1 0 0
chr12:55901539|55901785 hsa-miR-6880-3p 1 0 0
chr12:55901539|55901785 hsa-miR-3124-3p 1 1 0
chr12:55901539|55901785 hsa-miR-3184-3p 0 1 0
chr12:55901539|55901785 hsa-miR-188-3p 1 0 0
chr12:55901539|55901785 hsa-miR-6798-3p 1 1 0
chr12:55901539|55901785 hsa-miR-6734-3p 1 1 0
chr12:55901539|55901785 hsa-miR-6780b-3p 1 0 0
chr12:55901539|55901785 hsa-miR-2116-3p 0 1 0
chr12:55901539|55901785 hsa-miR-6888-3p 1 0 0
chr12:55901539|55901785 hsa-miR-6731-3p 1 0 0
chr12:55901539|55901785 hsa-miR-6769b-5p 1 1 0
chr12:55901539|55901785 hsa-miR-6778-5p 1 0 0
chr12:55901539|55901785 hsa-miR-6756-5p 1 1 0
chr12:55901539|55901785 hsa-miR-10401-5p 1 0 0
chr12:55901539|55901785 hsa-miR-6780a-5p 1 0 0
chr12:55901539|55901785 hsa-miR-6797-5p 1 0 0
chr12:55901539|55901785 hsa-miR-320a-5p 1 0 0
chr12:55901539|55901785 hsa-miR-4685-3p 1 0 0
chr12:55901539|55901785 hsa-miR-4755-5p 1 0 0
chr12:55901539|55901785 hsa-miR-4701-3p 1 0 0
chr12:55901539|55901785 hsa-miR-939-5p 1 1 0
chr12:55901539|55901785 hsa-miR-4758-5p 1 0 0
chr12:55901539|55901785 hsa-miR-4769-5p 1 0 0
chr12:55901539|55901785 hsa-miR-6766-5p 1 1 0
chr12:55901539|55901785 hsa-miR-6756-3p 1 0 0
chr12:55901539|55901785 hsa-miR-6792-3p 0 1 0
chr12:55901539|55901785 hsa-miR-5009-5p 0 1 0
chr12:55901539|55901785 hsa-miR-6810-3p 1 0 0
chr12:55901539|55901785 hsa-miR-6829-3p 1 0 0
chr12:55901539|55901785 hsa-miR-6884-5p 0 1 0
chr12:55901539|55901785 hsa-miR-4691-5p 0 1 0
chr12:55901539|55901785 hsa-miR-5006-3p 1 1 0
chr12:55901539|55901785 hsa-miR-6833-3p 1 0 0
chr12:55901539|55901785 hsa-miR-7153-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr12:55901539|55901785
ORF Type ORF1
Protein Length 46
Nucleotide Length 138
Protein Sequence MNTGNGRGKVQKVEVGKKREGLRETLGSGGQSWAAGGGSKPVWGVP
Nucleotide Sequence TTGAACACTGGGAATGGGAGGGGGAAAGTCCAAAAAGTAGAAGTTGGGAAGAAAAGGGAAGGATTGAGGGAGACGCTAGGCTCTGGAGGACAGAGCTGGGCCGCAGGAGGTGGAAGTAAGCCAGTATGGGGGGTACCC

CircID chr12:55901539|55901785
ORF Type ORF2
Protein Length 44
Nucleotide Length 135
Protein Sequence MAYFHLLRPSSVLQSLASPSILPFSSQLLLFGLSPSHSQCSKSQ
Nucleotide Sequence CTGGCTTACTTCCACCTCCTGCGGCCCAGCTCTGTCCTCCAGAGCCTAGCGTCTCCCTCAATCCTTCCCTTTTCTTCCCAACTTCTACTTTTTGGACTTTCCCCCTCCCATTCCCAGTGTTCAAAATCTCAGTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites