CircRNA Information

General Information
circRNA Basic Information
CircID chr12:55940324|55940671
Strand -
CircType exon
Host Gene ENSG00000065357.18;
Algorism CIRI2;
Sequence ATGTGTGGGTGCGAGGAGGCTGTGAGTCCGGGCGCTGCGACCGCTGTCAGAAAAAGATCCGGATCTACCACAGTCTGACCGGGCTGCATTGTGTATGGTGCCACCTAGAGGTCAGTTTGGGAGCCATCCCTTCTGGGTGCGTCTTACCCCGCAGAGCTGCCTTCTCCACGGGCCTCCGGCCACACCTCCTTTACAGGCACAGTTGCCCCTGCTCCCAAGGGCTCTTTCCAGCCCAGACTGCCAGGTTGAGAGGAGACAGGGTTACCTTCGTGATCTCTCTGTGCCCACCTCGTCTTTCAGATCCACGATGACTGCCTGCAAGCGGTGGGCCATGAGTGTGACTGTGGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:55940324|55940671 hsa-miR-208a-5p 0 0 1
chr12:55940324|55940671 hsa-miR-208a-3p 0 0 1
chr12:55940324|55940671 hsa-miR-10a-5p 0 0 1
chr12:55940324|55940671 hsa-miR-10a-3p 0 0 1
chr12:55940324|55940671 hsa-miR-10b-5p 0 0 1
chr12:55940324|55940671 hsa-miR-10b-3p 0 0 1
chr12:55940324|55940671 hsa-miR-34a-5p 0 0 1
chr12:55940324|55940671 hsa-miR-34a-3p 0 0 1
chr12:55940324|55940671 hsa-miR-150-5p 0 0 1
chr12:55940324|55940671 hsa-miR-150-3p 0 0 1
chr12:55940324|55940671 hsa-miR-379-5p 0 0 1
chr12:55940324|55940671 hsa-miR-379-3p 0 0 1
chr12:55940324|55940671 hsa-miR-449a 0 0 1
chr12:55940324|55940671 hsa-miR-555 0 0 1
chr12:55940324|55940671 hsa-miR-612 0 0 1
chr12:55940324|55940671 hsa-miR-622 0 0 1
chr12:55940324|55940671 hsa-miR-449b-5p 0 0 1
chr12:55940324|55940671 hsa-miR-449b-3p 0 0 1
chr12:55940324|55940671 hsa-miR-541-5p 0 0 1
chr12:55940324|55940671 hsa-miR-541-3p 0 0 1
chr12:55940324|55940671 hsa-miR-744-5p 0 0 1
chr12:55940324|55940671 hsa-miR-744-3p 0 0 1
chr12:55940324|55940671 hsa-miR-208b-5p 0 0 1
chr12:55940324|55940671 hsa-miR-208b-3p 0 0 1
chr12:55940324|55940671 hsa-miR-920 0 0 1
chr12:55940324|55940671 hsa-miR-663b 0 0 1
chr12:55940324|55940671 hsa-miR-1276 0 0 1
chr12:55940324|55940671 hsa-miR-767-5p 0 0 1
chr12:55940324|55940671 hsa-miR-339-5p 0 0 1
chr12:55940324|55940671 hsa-miR-490-3p 0 0 1
chr12:55940324|55940671 hsa-miR-654-5p 0 0 1
chr12:55940324|55940671 hsa-miR-875-3p 0 0 1
chr12:55940324|55940671 hsa-miR-34c-5p 0 0 1
chr12:55940324|55940671 hsa-miR-1280 0 0 1
chr12:55940324|55940671 hsa-miR-1233 0 0 1
chr12:55940324|55940671 hsa-miR-550 0 0 1
chr12:55940324|55940671 hsa-miR-644 0 0 1
chr12:55940324|55940671 hsa-miR-1285 0 0 1
chr12:55940324|55940671 hsa-miR-129-3p 0 0 1
chr12:55940324|55940671 hsa-miR-768-3p 0 0 1
chr12:55940324|55940671 hsa-miR-650 1 0 0
chr12:55940324|55940671 hsa-miR-762 1 0 0
chr12:55940324|55940671 hsa-miR-933 1 0 0
chr12:55940324|55940671 hsa-miR-940 1 0 0
chr12:55940324|55940671 hsa-miR-1203 1 0 0
chr12:55940324|55940671 hsa-miR-1270 1 0 0
chr12:55940324|55940671 hsa-miR-3185 1 0 0
chr12:55940324|55940671 hsa-miR-4270 1 0 0
chr12:55940324|55940671 hsa-miR-4271 1 0 0
chr12:55940324|55940671 hsa-miR-3652 1 0 0
chr12:55940324|55940671 hsa-miR-3714 1 0 0
chr12:55940324|55940671 hsa-miR-3909 1 0 0
chr12:55940324|55940671 hsa-miR-3911 1 0 0
chr12:55940324|55940671 hsa-miR-3937 1 0 0
chr12:55940324|55940671 hsa-miR-4498 1 0 0
chr12:55940324|55940671 hsa-miR-4516 1 0 0
chr12:55940324|55940671 hsa-miR-4522 1 0 0
chr12:55940324|55940671 hsa-miR-4531 1 0 0
chr12:55940324|55940671 hsa-miR-4533 1 0 0
chr12:55940324|55940671 hsa-miR-1587 1 0 0
chr12:55940324|55940671 hsa-miR-3960 1 0 0
chr12:55940324|55940671 hsa-miR-4634 1 0 0
chr12:55940324|55940671 hsa-miR-4656 1 0 0
chr12:55940324|55940671 hsa-miR-4669 1 0 0
chr12:55940324|55940671 hsa-miR-4688 1 0 0
chr12:55940324|55940671 hsa-miR-4692 1 0 0
chr12:55940324|55940671 hsa-miR-4706 1 0 0
chr12:55940324|55940671 hsa-miR-4710 1 0 0
chr12:55940324|55940671 hsa-miR-4734 1 0 0
chr12:55940324|55940671 hsa-miR-4739 1 0 0
chr12:55940324|55940671 hsa-miR-4741 1 0 0
chr12:55940324|55940671 hsa-miR-4767 1 0 0
chr12:55940324|55940671 hsa-miR-5193 0 1 0
chr12:55940324|55940671 hsa-miR-5787 1 0 0
chr12:55940324|55940671 hsa-miR-6081 1 1 0
chr12:55940324|55940671 hsa-miR-6090 1 0 0
chr12:55940324|55940671 hsa-miR-6125 1 0 0
chr12:55940324|55940671 hsa-miR-548ba 0 1 0
chr12:55940324|55940671 hsa-miR-8073 0 1 0
chr12:55940324|55940671 hsa-miR-12118 0 1 0
chr12:55940324|55940671 hsa-miR-4433b-3p 1 0 0
chr12:55940324|55940671 hsa-miR-323a-5p 1 0 0
chr12:55940324|55940671 hsa-miR-6747-5p 1 1 0
chr12:55940324|55940671 hsa-miR-671-5p 1 0 0
chr12:55940324|55940671 hsa-miR-6861-5p 1 0 0
chr12:55940324|55940671 hsa-miR-7106-5p 1 0 0
chr12:55940324|55940671 hsa-miR-6894-5p 1 0 0
chr12:55940324|55940671 hsa-miR-6799-5p 1 0 0
chr12:55940324|55940671 hsa-miR-6510-5p 1 0 0
chr12:55940324|55940671 hsa-miR-7851-3p 1 0 0
chr12:55940324|55940671 hsa-miR-7114-5p 1 0 0
chr12:55940324|55940671 hsa-miR-6089 1 0 0
chr12:55940324|55940671 hsa-miR-6880-5p 1 0 0
chr12:55940324|55940671 hsa-miR-7847-3p 1 0 0
chr12:55940324|55940671 hsa-miR-4695-5p 1 0 0
chr12:55940324|55940671 hsa-miR-6867-5p 1 0 0
chr12:55940324|55940671 hsa-miR-4722-5p 1 0 0
chr12:55940324|55940671 hsa-miR-6727-5p 1 0 0
chr12:55940324|55940671 hsa-miR-6806-5p 1 0 0
chr12:55940324|55940671 hsa-miR-6721-5p 1 0 0
chr12:55940324|55940671 hsa-miR-7108-5p 1 1 0
chr12:55940324|55940671 hsa-miR-6742-5p 1 1 0
chr12:55940324|55940671 hsa-miR-6829-5p 1 0 0
chr12:55940324|55940671 hsa-miR-3190-3p 1 0 0
chr12:55940324|55940671 hsa-miR-6827-5p 1 0 0
chr12:55940324|55940671 hsa-miR-6770-5p 1 1 0
chr12:55940324|55940671 hsa-miR-486-3p 1 0 0
chr12:55940324|55940671 hsa-miR-6881-5p 1 1 0
chr12:55940324|55940671 hsa-miR-2467-3p 1 0 0
chr12:55940324|55940671 hsa-miR-6810-5p 1 0 0
chr12:55940324|55940671 hsa-miR-5008-5p 1 0 0
chr12:55940324|55940671 hsa-miR-1226-5p 1 0 0
chr12:55940324|55940671 hsa-miR-6740-5p 1 1 0
chr12:55940324|55940671 hsa-miR-4786-3p 1 0 0
chr12:55940324|55940671 hsa-miR-4640-5p 1 0 0
chr12:55940324|55940671 hsa-miR-885-3p 1 0 0
chr12:55940324|55940671 hsa-miR-7161-3p 1 0 0
chr12:55940324|55940671 hsa-miR-4743-5p 1 0 0
chr12:55940324|55940671 hsa-miR-6789-5p 1 0 0
chr12:55940324|55940671 hsa-miR-6781-5p 1 0 0
chr12:55940324|55940671 hsa-miR-3940-3p 1 0 0
chr12:55940324|55940671 hsa-miR-6779-3p 0 1 0
chr12:55940324|55940671 hsa-miR-6789-3p 1 0 0
chr12:55940324|55940671 hsa-miR-6732-3p 0 1 0
chr12:55940324|55940671 hsa-miR-1207-5p 1 0 0
chr12:55940324|55940671 hsa-miR-1233-5p 1 0 0
chr12:55940324|55940671 hsa-miR-4763-3p 1 0 0
chr12:55940324|55940671 hsa-miR-6778-5p 1 0 0
chr12:55940324|55940671 hsa-miR-6865-5p 1 0 0
chr12:55940324|55940671 hsa-miR-5001-5p 1 0 0
chr12:55940324|55940671 hsa-miR-6726-5p 1 0 0
chr12:55940324|55940671 hsa-miR-6737-5p 1 0 0
chr12:55940324|55940671 hsa-miR-6743-5p 1 0 0
chr12:55940324|55940671 hsa-miR-6752-5p 1 0 0
chr12:55940324|55940671 hsa-miR-6754-5p 1 0 0
chr12:55940324|55940671 hsa-miR-6756-5p 1 0 0
chr12:55940324|55940671 hsa-miR-6769a-5p 1 0 0
chr12:55940324|55940671 hsa-miR-6803-5p 1 0 0
chr12:55940324|55940671 hsa-miR-6815-5p 0 1 0
chr12:55940324|55940671 hsa-miR-6819-5p 1 0 0
chr12:55940324|55940671 hsa-miR-6851-5p 1 1 0
chr12:55940324|55940671 hsa-miR-7110-5p 1 0 0
chr12:55940324|55940671 hsa-miR-10401-5p 1 0 0
chr12:55940324|55940671 hsa-miR-6722-3p 1 1 0
chr12:55940324|55940671 hsa-miR-6751-5p 1 0 0
chr12:55940324|55940671 hsa-miR-6779-5p 1 0 0
chr12:55940324|55940671 hsa-miR-6808-5p 1 0 0
chr12:55940324|55940671 hsa-miR-6879-5p 1 0 0
chr12:55940324|55940671 hsa-miR-3620-5p 1 0 0
chr12:55940324|55940671 hsa-miR-4728-5p 1 0 0
chr12:55940324|55940671 hsa-miR-5196-5p 1 0 0
chr12:55940324|55940671 hsa-miR-6780b-5p 1 0 0
chr12:55940324|55940671 hsa-miR-1909-3p 1 0 0
chr12:55940324|55940671 hsa-miR-328-5p 1 0 0
chr12:55940324|55940671 hsa-miR-4632-5p 1 0 0
chr12:55940324|55940671 hsa-miR-4725-3p 1 0 0
chr12:55940324|55940671 hsa-miR-4749-5p 1 0 0
chr12:55940324|55940671 hsa-miR-6777-5p 1 0 0
chr12:55940324|55940671 hsa-miR-6795-5p 1 0 0
chr12:55940324|55940671 hsa-miR-6848-5p 1 0 0
chr12:55940324|55940671 hsa-miR-6858-5p 1 0 0
chr12:55940324|55940671 hsa-miR-6885-5p 1 0 0
chr12:55940324|55940671 hsa-miR-939-5p 1 0 0
chr12:55940324|55940671 hsa-miR-34b-5p 0 1 0
chr12:55940324|55940671 hsa-miR-6511a-5p 1 0 0
chr12:55940324|55940671 hsa-miR-6511b-5p 1 1 0
chr12:55940324|55940671 hsa-miR-3940-5p 1 0 0
chr12:55940324|55940671 hsa-miR-1271-3p 1 0 0
chr12:55940324|55940671 hsa-miR-6791-3p 0 1 0
chr12:55940324|55940671 hsa-miR-6724-5p 1 0 0
chr12:55940324|55940671 hsa-miR-6791-5p 1 0 0
chr12:55940324|55940671 hsa-miR-550a-5p 1 0 0
chr12:55940324|55940671 hsa-miR-6529-5p 0 1 0
chr12:55940324|55940671 hsa-miR-6829-3p 0 1 0
chr12:55940324|55940671 hsa-miR-9851-3p 0 1 0
chr12:55940324|55940671 hsa-miR-2682-5p 1 0 0
chr12:55940324|55940671 hsa-miR-5699-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr12:55940324|55940671
ORF Type ORF1
Protein Length 25
Nucleotide Length 78
Protein Sequence MCGCEEAVSPGAATAVRKRSGSTTV
Nucleotide Sequence ATGTGTGGGTGCGAGGAGGCTGTGAGTCCGGGCGCTGCGACCGCTGTCAGAAAAAGATCCGGATCTACCACAGTCTGA

CircID chr12:55940324|55940671
ORF Type ORF2
Protein Length 38
Nucleotide Length 117
Protein Sequence MGASYPAELPSPRASGHTSFTGTVAPAPKGSFQPRLPG
Nucleotide Sequence CTGGGTGCGTCTTACCCCGCAGAGCTGCCTTCTCCACGGGCCTCCGGCCACACCTCCTTTACAGGCACAGTTGCCCCTGCTCCCAAGGGCTCTTTCCAGCCCAGACTGCCAGGTTGA

CircID chr12:55940324|55940671
ORF Type ORF3
Protein Length 104
Nucleotide Length 312
Protein Sequence MRPLSEKDPDLPQSDRAALCMVPPRGQFGSHPFWVRLTPQSCLLHGPPATPPLQAQLPLLPRALSSPDCQVERRQGYLRDLSVPTSSFRSTMTACKRWAMSVTV
Nucleotide Sequence CTGCGACCGCTGTCAGAAAAAGATCCGGATCTACCACAGTCTGACCGGGCTGCATTGTGTATGGTGCCACCTAGAGGTCAGTTTGGGAGCCATCCCTTCTGGGTGCGTCTTACCCCGCAGAGCTGCCTTCTCCACGGGCCTCCGGCCACACCTCCTTTACAGGCACAGTTGCCCCTGCTCCCAAGGGCTCTTTCCAGCCCAGACTGCCAGGTTGAGAGGAGACAGGGTTACCTTCGTGATCTCTCTGTGCCCACCTCGTCTTTCAGATCCACGATGACTGCCTGCAAGCGGTGGGCCATGAGTGTGACTGTG

CircID chr12:55940324|55940671
ORF Type ORF4
Protein Length 78
Nucleotide Length 237
Protein Sequence MTGLHCVWCHLEVSLGAIPSGCVLPRRAAFSTGLRPHLLYRHSCPCSQGLFPAQTARLRGDRVTFVISLCPPRLSDPR
Nucleotide Sequence CTGACCGGGCTGCATTGTGTATGGTGCCACCTAGAGGTCAGTTTGGGAGCCATCCCTTCTGGGTGCGTCTTACCCCGCAGAGCTGCCTTCTCCACGGGCCTCCGGCCACACCTCCTTTACAGGCACAGTTGCCCCTGCTCCCAAGGGCTCTTTCCAGCCCAGACTGCCAGGTTGAGAGGAGACAGGGTTACCTTCGTGATCTCTCTGTGCCCACCTCGTCTTTCAGATCCACGATGA

CircID chr12:55940324|55940671
ORF Type ORF5
Protein Length 39
Nucleotide Length 120
Protein Sequence MERALGSRGNCACKGGVAGGPWRRQLCGVRRTQKGWLPN
Nucleotide Sequence CTGGAAAGAGCCCTTGGGAGCAGGGGCAACTGTGCCTGTAAAGGAGGTGTGGCCGGAGGCCCGTGGAGAAGGCAGCTCTGCGGGGTAAGACGCACCCAGAAGGGATGGCTCCCAAACTGA

CircID chr12:55940324|55940671
ORF Type ORF6
Protein Length 30
Nucleotide Length 93
Protein Sequence MGWKEPLGAGATVPVKEVWPEARGEGSSAG
Nucleotide Sequence CTGGGCTGGAAAGAGCCCTTGGGAGCAGGGGCAACTGTGCCTGTAAAGGAGGTGTGGCCGGAGGCCCGTGGAGAAGGCAGCTCTGCGGGGTAA

CircID chr12:55940324|55940671
ORF Type ORF7
Protein Length 29
Nucleotide Length 87
Protein Sequence MQPGQTVVDPDLFLTAVAAPGLTASSHPH
Nucleotide Sequence ATGCAGCCCGGTCAGACTGTGGTAGATCCGGATCTTTTTCTGACAGCGGTCGCAGCGCCCGGACTCACAGCCTCCTCGCACCCACAC

CircID chr12:55940324|55940671
ORF Type ORF8
Protein Length 29
Nucleotide Length 90
Protein Sequence MRGKTHPEGMAPKLTSRWHHTQCSPVRLW
Nucleotide Sequence CTGCGGGGTAAGACGCACCCAGAAGGGATGGCTCCCAAACTGACCTCTAGGTGGCACCATACACAATGCAGCCCGGTCAGACTGTGGTAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites