CircRNA Information

General Information
circRNA Basic Information
CircID chr12:55992450|55992644
Strand +
CircType exon
Host Gene ENSG00000111540.14;
Algorism CIRI2;
Sequence TTTCTGCATCCTGGGGAGAGGAGAAAAGAGGCTCAAGAACAGGGACTGACCAAAAGCAGAAGGGGAAGGGACAGGAGTCAGAAGTGTTTTCTGAAAAAATGGGGAGGAACACTAGGGAGGAGGAGAAAAGATACGTAAGTCGCTGTCTTGTACCTATAATACAAAGTGAAGAAAGTTTGTTTTGGAAGGTAAGTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:55992450|55992644 hsa-miR-133b 0 0 1
chr12:55992450|55992644 hsa-miR-345-5p 0 0 1
chr12:55992450|55992644 hsa-miR-345-3p 0 0 1
chr12:55992450|55992644 hsa-miR-412-5p 0 0 1
chr12:55992450|55992644 hsa-miR-412-3p 0 0 1
chr12:55992450|55992644 hsa-miR-495-5p 0 0 1
chr12:55992450|55992644 hsa-miR-495-3p 0 0 1
chr12:55992450|55992644 hsa-miR-526b-5p 0 0 1
chr12:55992450|55992644 hsa-miR-526b-3p 0 0 1
chr12:55992450|55992644 hsa-miR-570-5p 0 0 1
chr12:55992450|55992644 hsa-miR-570-3p 0 0 1
chr12:55992450|55992644 hsa-miR-298 0 0 1
chr12:55992450|55992644 hsa-miR-1237-5p 0 0 1
chr12:55992450|55992644 hsa-miR-1237-3p 0 0 1
chr12:55992450|55992644 hsa-miR-339-5p 1 0 1
chr12:55992450|55992644 hsa-miR-455-3p 0 0 1
chr12:55992450|55992644 hsa-miR-1274a 0 0 1
chr12:55992450|55992644 hsa-miR-1274b 0 0 1
chr12:55992450|55992644 hsa-miR-133a 0 0 1
chr12:55992450|55992644 hsa-miR-1281 1 0 0
chr12:55992450|55992644 hsa-miR-4308 1 0 0
chr12:55992450|55992644 hsa-miR-4312 1 0 0
chr12:55992450|55992644 hsa-miR-4268 1 1 0
chr12:55992450|55992644 hsa-miR-3714 1 0 0
chr12:55992450|55992644 hsa-miR-5193 1 0 0
chr12:55992450|55992644 hsa-miR-9898 1 0 0
chr12:55992450|55992644 hsa-miR-6749-3p 1 1 0
chr12:55992450|55992644 hsa-miR-18a-3p 1 0 0
chr12:55992450|55992644 hsa-miR-4700-3p 1 0 0
chr12:55992450|55992644 hsa-miR-6836-3p 1 0 0
chr12:55992450|55992644 hsa-miR-149-5p 1 1 0
chr12:55992450|55992644 hsa-miR-6881-3p 1 1 0
chr12:55992450|55992644 hsa-miR-486-5p 1 0 0
chr12:55992450|55992644 hsa-miR-1225-3p 1 0 0
chr12:55992450|55992644 hsa-miR-6875-3p 1 0 0
chr12:55992450|55992644 hsa-miR-4677-5p 0 1 0
chr12:55992450|55992644 hsa-miR-6845-3p 1 0 0
chr12:55992450|55992644 hsa-miR-877-3p 1 0 0
chr12:55992450|55992644 hsa-miR-4697-3p 1 0 0
chr12:55992450|55992644 hsa-miR-6728-3p 1 0 0
chr12:55992450|55992644 hsa-miR-6740-3p 1 0 0
chr12:55992450|55992644 hsa-miR-939-3p 1 0 0
chr12:55992450|55992644 hsa-miR-6772-3p 1 0 0
chr12:55992450|55992644 hsa-miR-1247-5p 1 0 0
chr12:55992450|55992644 hsa-miR-5187-3p 1 0 0
chr12:55992450|55992644 hsa-miR-5001-3p 1 0 0
chr12:55992450|55992644 hsa-miR-7113-3p 1 0 0
chr12:55992450|55992644 hsa-miR-4743-3p 1 0 0
chr12:55992450|55992644 hsa-miR-6809-3p 1 1 0
chr12:55992450|55992644 hsa-miR-7111-3p 1 1 0
chr12:55992450|55992644 hsa-miR-6780a-3p 1 0 0
chr12:55992450|55992644 hsa-miR-1266-3p 1 1 0
chr12:55992450|55992644 hsa-miR-4667-3p 1 0 0
chr12:55992450|55992644 hsa-miR-4646-3p 1 1 0
chr12:55992450|55992644 hsa-miR-1236-3p 1 1 0
chr12:55992450|55992644 hsa-miR-2114-5p 1 1 0
chr12:55992450|55992644 hsa-miR-1238-3p 1 0 0
chr12:55992450|55992644 hsa-miR-6778-3p 1 0 0
chr12:55992450|55992644 hsa-miR-6826-3p 1 0 0
chr12:55992450|55992644 hsa-miR-1914-5p 1 0 0
chr12:55992450|55992644 hsa-miR-6880-3p 1 0 0
chr12:55992450|55992644 hsa-miR-3124-3p 1 0 0
chr12:55992450|55992644 hsa-miR-6883-3p 1 0 0
chr12:55992450|55992644 hsa-miR-6748-3p 1 1 0
chr12:55992450|55992644 hsa-miR-4433b-5p 1 0 0
chr12:55992450|55992644 hsa-miR-6734-3p 1 1 0
chr12:55992450|55992644 hsa-miR-6515-3p 1 0 0
chr12:55992450|55992644 hsa-miR-6780b-3p 1 0 0
chr12:55992450|55992644 hsa-miR-6731-3p 1 0 0
chr12:55992450|55992644 hsa-miR-3127-3p 1 1 0
chr12:55992450|55992644 hsa-miR-320a-5p 1 0 0
chr12:55992450|55992644 hsa-miR-4685-3p 1 0 0
chr12:55992450|55992644 hsa-miR-6791-3p 1 0 0
chr12:55992450|55992644 hsa-miR-6877-3p 1 0 0
chr12:55992450|55992644 hsa-miR-6756-3p 1 0 0
chr12:55992450|55992644 hsa-miR-6792-3p 1 0 0
chr12:55992450|55992644 hsa-miR-6829-3p 1 0 0
chr12:55992450|55992644 hsa-miR-6775-3p 1 0 0
chr12:55992450|55992644 hsa-miR-3059-5p 1 0 0
chr12:55992450|55992644 hsa-miR-4723-3p 1 1 0
chr12:55992450|55992644 hsa-miR-6751-3p 1 1 0
chr12:55992450|55992644 hsa-miR-6769b-3p 1 0 0
chr12:55992450|55992644 hsa-miR-6819-3p 1 1 0
chr12:55992450|55992644 hsa-miR-6823-3p 1 1 0
chr12:55992450|55992644 hsa-miR-6783-3p 1 0 0
chr12:55992450|55992644 hsa-miR-6781-3p 1 1 0
chr12:55992450|55992644 hsa-miR-6824-3p 1 0 0
chr12:55992450|55992644 hsa-miR-5699-3p 1 0 0
chr12:55992450|55992644 hsa-miR-6835-3p 0 1 0
chr12:55992450|55992644 hsa-miR-147b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr12:55992450|55992644
ORF Type ORF1
Protein Length 44
Nucleotide Length 135
Protein Sequence MHPGERRKEAQEQGLTKSRRGRDRSQKCFLKKWGGTLGRRRKDT
Nucleotide Sequence CTGCATCCTGGGGAGAGGAGAAAAGAGGCTCAAGAACAGGGACTGACCAAAAGCAGAAGGGGAAGGGACAGGAGTCAGAAGTGTTTTCTGAAAAAATGGGGAGGAACACTAGGGAGGAGGAGAAAAGATACGTAA

CircID chr12:55992450|55992644
ORF Type ORF2
Protein Length 32
Nucleotide Length 96
Protein Sequence MGRNTREEEKRYVSRCLVPIIQSEESLFWKVS
Nucleotide Sequence ATGGGGAGGAACACTAGGGAGGAGGAGAAAAGATACGTAAGTCGCTGTCTTGTACCTATAATACAAAGTGAAGAAAGTTTGTTTTGGAAGGTAAGT

CircID chr12:55992450|55992644
ORF Type ORF3
Protein Length 27
Nucleotide Length 81
Protein Sequence MTPVPSPSAFGQSLFLSLFSPLPRMQK
Nucleotide Sequence CTGACTCCTGTCCCTTCCCCTTCTGCTTTTGGTCAGTCCCTGTTCTTGAGCCTCTTTTCTCCTCTCCCCAGGATGCAGAAA

CircID chr12:55992450|55992644
ORF Type ORF4
Protein Length 28
Nucleotide Length 87
Protein Sequence MYYRYKTATYVSFLLLPSVPPHFFRKHF
Nucleotide Sequence TTGTATTATAGGTACAAGACAGCGACTTACGTATCTTTTCTCCTCCTCCCTAGTGTTCCTCCCCATTTTTTCAGAAAACACTTCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites