CircRNA Information

General Information
circRNA Basic Information
CircID chr12:55993604|55993842
Strand -
CircType exon
Host Gene ENSG00000111540.14;
Algorism CIRI2;
Sequence TGTACAGTCTGTTCTATCCTCTGCCTCCCATCAGGCCCTGTTTCTTTGTTCCTTTGTTAATATCTTGAATTTAGTCCCTCCATCCTTAATCCCCCCATCCCTCCCCATCATGCAACCAGTGGTTTAATCCATGTACCAATAGGGGCTAGTACCACAGAGGCCTCCTGTGGTGCCCTCGTATCATACCACCTGTTCCTGTGGAGAGGGAATGACCGGCACTGAAGGTACCTTACAACTGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:55993604|55993842 hsa-miR-148a-5p 0 0 1
chr12:55993604|55993842 hsa-miR-148a-3p 0 0 1
chr12:55993604|55993842 hsa-miR-152-5p 0 0 1
chr12:55993604|55993842 hsa-miR-152-3p 0 0 1
chr12:55993604|55993842 hsa-miR-148b-5p 0 0 1
chr12:55993604|55993842 hsa-miR-148b-3p 0 0 1
chr12:55993604|55993842 hsa-miR-495-5p 0 0 1
chr12:55993604|55993842 hsa-miR-495-3p 0 0 1
chr12:55993604|55993842 hsa-miR-552-5p 0 0 1
chr12:55993604|55993842 hsa-miR-552-3p 0 0 1
chr12:55993604|55993842 hsa-miR-650 1 0 1
chr12:55993604|55993842 hsa-miR-873-5p 0 0 1
chr12:55993604|55993842 hsa-miR-873-3p 0 0 1
chr12:55993604|55993842 hsa-miR-939-5p 0 0 1
chr12:55993604|55993842 hsa-miR-939-3p 0 0 1
chr12:55993604|55993842 hsa-miR-1246 0 0 1
chr12:55993604|55993842 hsa-miR-1263 0 0 1
chr12:55993604|55993842 hsa-miR-1827 1 1 1
chr12:55993604|55993842 hsa-miR-490-5p 0 0 1
chr12:55993604|55993842 hsa-miR-140-3p 0 0 1
chr12:55993604|55993842 hsa-miR-642 0 0 1
chr12:55993604|55993842 hsa-miR-1201 0 0 1
chr12:55993604|55993842 hsa-miR-371-3p 0 0 1
chr12:55993604|55993842 hsa-miR-1185 0 0 1
chr12:55993604|55993842 hsa-miR-608 1 0 0
chr12:55993604|55993842 hsa-miR-658 1 0 0
chr12:55993604|55993842 hsa-miR-762 1 0 0
chr12:55993604|55993842 hsa-miR-1182 1 0 0
chr12:55993604|55993842 hsa-miR-2861 1 1 0
chr12:55993604|55993842 hsa-miR-3197 1 0 0
chr12:55993604|55993842 hsa-miR-4298 1 0 0
chr12:55993604|55993842 hsa-miR-4257 1 0 0
chr12:55993604|55993842 hsa-miR-4327 1 0 0
chr12:55993604|55993842 hsa-miR-3916 1 0 0
chr12:55993604|55993842 hsa-miR-3918 1 1 0
chr12:55993604|55993842 hsa-miR-3945 1 0 0
chr12:55993604|55993842 hsa-miR-4450 1 1 0
chr12:55993604|55993842 hsa-miR-4467 1 0 0
chr12:55993604|55993842 hsa-miR-3689c 1 0 0
chr12:55993604|55993842 hsa-miR-2392 1 1 0
chr12:55993604|55993842 hsa-miR-4510 1 0 0
chr12:55993604|55993842 hsa-miR-4525 1 1 0
chr12:55993604|55993842 hsa-miR-4651 1 0 0
chr12:55993604|55993842 hsa-miR-4656 1 0 0
chr12:55993604|55993842 hsa-miR-4688 1 0 0
chr12:55993604|55993842 hsa-miR-4706 1 0 0
chr12:55993604|55993842 hsa-miR-4710 1 0 0
chr12:55993604|55993842 hsa-miR-4739 1 0 0
chr12:55993604|55993842 hsa-miR-5090 1 0 0
chr12:55993604|55993842 hsa-miR-5194 1 0 0
chr12:55993604|55993842 hsa-miR-5787 1 0 0
chr12:55993604|55993842 hsa-miR-6076 1 0 0
chr12:55993604|55993842 hsa-miR-6085 1 0 0
chr12:55993604|55993842 hsa-miR-6090 1 0 0
chr12:55993604|55993842 hsa-miR-6127 1 0 0
chr12:55993604|55993842 hsa-miR-6129 1 0 0
chr12:55993604|55993842 hsa-miR-6130 1 0 0
chr12:55993604|55993842 hsa-miR-6132 1 0 0
chr12:55993604|55993842 hsa-miR-6133 1 0 0
chr12:55993604|55993842 hsa-miR-7150 1 0 0
chr12:55993604|55993842 hsa-miR-8052 1 0 0
chr12:55993604|55993842 hsa-miR-8085 1 0 0
chr12:55993604|55993842 hsa-miR-12119 1 0 0
chr12:55993604|55993842 hsa-miR-12120 1 1 0
chr12:55993604|55993842 hsa-miR-4433b-3p 1 0 0
chr12:55993604|55993842 hsa-miR-6734-5p 1 0 0
chr12:55993604|55993842 hsa-miR-6765-5p 1 0 0
chr12:55993604|55993842 hsa-miR-3150a-3p 1 0 0
chr12:55993604|55993842 hsa-miR-7106-5p 1 0 0
chr12:55993604|55993842 hsa-miR-6825-5p 1 1 0
chr12:55993604|55993842 hsa-miR-6894-5p 1 0 0
chr12:55993604|55993842 hsa-miR-6857-5p 1 0 0
chr12:55993604|55993842 hsa-miR-25-5p 1 0 0
chr12:55993604|55993842 hsa-miR-6799-5p 1 0 0
chr12:55993604|55993842 hsa-miR-6510-5p 1 0 0
chr12:55993604|55993842 hsa-miR-6728-5p 1 0 0
chr12:55993604|55993842 hsa-miR-5187-5p 1 0 0
chr12:55993604|55993842 hsa-miR-3192-5p 1 0 0
chr12:55993604|55993842 hsa-miR-6757-5p 1 1 0
chr12:55993604|55993842 hsa-miR-7847-3p 1 0 0
chr12:55993604|55993842 hsa-miR-4695-5p 1 1 0
chr12:55993604|55993842 hsa-miR-6890-5p 1 0 0
chr12:55993604|55993842 hsa-miR-6721-5p 1 0 0
chr12:55993604|55993842 hsa-miR-6776-5p 1 0 0
chr12:55993604|55993842 hsa-miR-7845-5p 1 0 0
chr12:55993604|55993842 hsa-miR-6742-5p 1 0 0
chr12:55993604|55993842 hsa-miR-3605-5p 1 0 0
chr12:55993604|55993842 hsa-miR-6716-5p 1 0 0
chr12:55993604|55993842 hsa-miR-6871-5p 1 1 0
chr12:55993604|55993842 hsa-miR-6768-5p 1 0 0
chr12:55993604|55993842 hsa-miR-6748-5p 1 0 0
chr12:55993604|55993842 hsa-miR-3190-3p 1 0 0
chr12:55993604|55993842 hsa-miR-6827-5p 1 0 0
chr12:55993604|55993842 hsa-miR-3126-5p 0 1 0
chr12:55993604|55993842 hsa-miR-6881-5p 1 0 0
chr12:55993604|55993842 hsa-miR-2467-3p 1 1 0
chr12:55993604|55993842 hsa-miR-6782-5p 1 1 0
chr12:55993604|55993842 hsa-miR-6810-5p 1 0 0
chr12:55993604|55993842 hsa-miR-30b-3p 1 1 0
chr12:55993604|55993842 hsa-miR-6786-5p 1 0 0
chr12:55993604|55993842 hsa-miR-7109-5p 1 0 0
chr12:55993604|55993842 hsa-miR-1229-5p 1 0 0
chr12:55993604|55993842 hsa-miR-6753-5p 1 0 0
chr12:55993604|55993842 hsa-miR-1908-5p 1 0 0
chr12:55993604|55993842 hsa-miR-1228-5p 1 0 0
chr12:55993604|55993842 hsa-miR-296-3p 1 0 0
chr12:55993604|55993842 hsa-miR-6771-5p 1 0 0
chr12:55993604|55993842 hsa-miR-4732-5p 1 0 0
chr12:55993604|55993842 hsa-miR-6749-5p 1 0 0
chr12:55993604|55993842 hsa-miR-6847-5p 1 1 0
chr12:55993604|55993842 hsa-miR-642b-5p 0 1 0
chr12:55993604|55993842 hsa-miR-4743-5p 1 0 0
chr12:55993604|55993842 hsa-miR-149-3p 1 1 0
chr12:55993604|55993842 hsa-miR-3616-3p 0 1 0
chr12:55993604|55993842 hsa-miR-6886-5p 1 0 0
chr12:55993604|55993842 hsa-miR-4684-3p 1 0 0
chr12:55993604|55993842 hsa-miR-5010-5p 1 0 0
chr12:55993604|55993842 hsa-miR-6866-5p 1 0 0
chr12:55993604|55993842 hsa-miR-423-5p 1 0 0
chr12:55993604|55993842 hsa-let-7f-5p 1 0 0
chr12:55993604|55993842 hsa-let-7e-5p 1 0 0
chr12:55993604|55993842 hsa-let-7a-5p 1 0 0
chr12:55993604|55993842 hsa-miR-18a-5p 0 1 0
chr12:55993604|55993842 hsa-miR-3680-3p 1 0 0
chr12:55993604|55993842 hsa-miR-642a-5p 0 1 0
chr12:55993604|55993842 hsa-miR-4802-3p 0 1 0
chr12:55993604|55993842 hsa-miR-10400-5p 1 0 0
chr12:55993604|55993842 hsa-miR-1207-5p 1 0 0
chr12:55993604|55993842 hsa-miR-1233-5p 1 0 0
chr12:55993604|55993842 hsa-miR-1273h-5p 1 1 0
chr12:55993604|55993842 hsa-miR-3689b-3p 1 0 0
chr12:55993604|55993842 hsa-miR-4763-3p 1 1 0
chr12:55993604|55993842 hsa-miR-6769b-5p 1 0 0
chr12:55993604|55993842 hsa-miR-6778-5p 1 0 0
chr12:55993604|55993842 hsa-miR-6812-5p 1 0 0
chr12:55993604|55993842 hsa-miR-6816-5p 1 0 0
chr12:55993604|55993842 hsa-miR-6870-5p 1 0 0
chr12:55993604|55993842 hsa-miR-6893-5p 1 0 0
chr12:55993604|55993842 hsa-miR-6775-5p 1 0 0
chr12:55993604|55993842 hsa-miR-1343-5p 1 0 0
chr12:55993604|55993842 hsa-miR-5001-5p 1 0 0
chr12:55993604|55993842 hsa-miR-6737-5p 1 0 0
chr12:55993604|55993842 hsa-miR-6743-5p 1 0 0
chr12:55993604|55993842 hsa-miR-6752-5p 1 0 0
chr12:55993604|55993842 hsa-miR-6756-5p 1 0 0
chr12:55993604|55993842 hsa-miR-6769a-5p 1 0 0
chr12:55993604|55993842 hsa-miR-6803-5p 1 0 0
chr12:55993604|55993842 hsa-miR-6819-5p 1 0 0
chr12:55993604|55993842 hsa-miR-7110-5p 1 0 0
chr12:55993604|55993842 hsa-miR-11181-3p 1 0 0
chr12:55993604|55993842 hsa-miR-1249-5p 1 1 0
chr12:55993604|55993842 hsa-miR-6722-3p 1 0 0
chr12:55993604|55993842 hsa-miR-6751-5p 1 0 0
chr12:55993604|55993842 hsa-miR-6763-5p 1 1 0
chr12:55993604|55993842 hsa-miR-6779-5p 1 0 0
chr12:55993604|55993842 hsa-miR-6780a-5p 1 1 0
chr12:55993604|55993842 hsa-miR-6788-5p 1 0 0
chr12:55993604|55993842 hsa-miR-6797-5p 1 1 0
chr12:55993604|55993842 hsa-miR-6808-5p 1 0 0
chr12:55993604|55993842 hsa-miR-6875-5p 1 1 0
chr12:55993604|55993842 hsa-miR-7111-5p 1 0 0
chr12:55993604|55993842 hsa-miR-4728-5p 1 1 0
chr12:55993604|55993842 hsa-miR-5196-5p 1 0 0
chr12:55993604|55993842 hsa-miR-6780b-5p 1 0 0
chr12:55993604|55993842 hsa-miR-6836-5p 1 0 0
chr12:55993604|55993842 hsa-miR-10396b-5p 1 0 0
chr12:55993604|55993842 hsa-miR-10526-3p 1 0 0
chr12:55993604|55993842 hsa-miR-328-5p 1 0 0
chr12:55993604|55993842 hsa-miR-4685-5p 0 1 0
chr12:55993604|55993842 hsa-miR-4701-3p 1 0 0
chr12:55993604|55993842 hsa-miR-4725-3p 1 0 0
chr12:55993604|55993842 hsa-miR-4726-5p 1 0 0
chr12:55993604|55993842 hsa-miR-4749-5p 1 0 0
chr12:55993604|55993842 hsa-miR-6735-5p 1 0 0
chr12:55993604|55993842 hsa-miR-6738-5p 1 0 0
chr12:55993604|55993842 hsa-miR-6794-5p 1 0 0
chr12:55993604|55993842 hsa-miR-6795-5p 1 1 0
chr12:55993604|55993842 hsa-miR-6846-5p 1 0 0
chr12:55993604|55993842 hsa-miR-6848-5p 1 0 0
chr12:55993604|55993842 hsa-miR-6858-5p 1 0 0
chr12:55993604|55993842 hsa-miR-6883-5p 1 1 0
chr12:55993604|55993842 hsa-miR-6887-5p 1 1 0
chr12:55993604|55993842 hsa-miR-6831-5p 1 0 0
chr12:55993604|55993842 hsa-miR-6845-5p 1 0 0
chr12:55993604|55993842 hsa-miR-6885-5p 1 0 0
chr12:55993604|55993842 hsa-miR-4769-5p 1 0 0
chr12:55993604|55993842 hsa-miR-6511a-5p 1 1 0
chr12:55993604|55993842 hsa-miR-1914-3p 1 0 0
chr12:55993604|55993842 hsa-miR-4700-5p 1 0 0
chr12:55993604|55993842 hsa-miR-3679-5p 1 1 0
chr12:55993604|55993842 hsa-miR-6891-5p 1 0 0
chr12:55993604|55993842 hsa-miR-6766-5p 1 0 0
chr12:55993604|55993842 hsa-miR-6785-5p 1 1 0
chr12:55993604|55993842 hsa-miR-4667-5p 1 0 0
chr12:55993604|55993842 hsa-miR-550a-3-5p 1 0 0
chr12:55993604|55993842 hsa-miR-550a-5p 1 0 0
chr12:55993604|55993842 hsa-miR-18b-5p 0 1 0
chr12:55993604|55993842 hsa-miR-4757-5p 0 1 0
chr12:55993604|55993842 hsa-miR-6837-5p 1 0 0
chr12:55993604|55993842 hsa-miR-6859-5p 1 1 0
chr12:55993604|55993842 hsa-miR-2682-5p 1 0 0
chr12:55993604|55993842 hsa-miR-520e-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr12:55993604|55993842
ORF Type ORF1
Protein Length 29
Nucleotide Length 90
Protein Sequence MFLCSFVNILNLVPPSLIPPSLPIMQPVV
Nucleotide Sequence CTGTTTCTTTGTTCCTTTGTTAATATCTTGAATTTAGTCCCTCCATCCTTAATCCCCCCATCCCTCCCCATCATGCAACCAGTGGTTTAA
CircID chr12:55993604|55993842
ORF Type ORF2
Protein Length 26
Nucleotide Length 81
Protein Sequence MMGRDGGIKDGGTKFKILTKEQRNRA
Nucleotide Sequence ATGATGGGGAGGGATGGGGGGATTAAGGATGGAGGGACTAAATTCAAGATATTAACAAAGGAACAAAGAAACAGGGCCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab