CircRNA Information

General Information
circRNA Basic Information
CircID chr12:56137886|56138272
Strand +
CircType exon
Host Gene ENSG00000139641.11;
Algorism CIRI2;
Sequence CTCCTCTAACTCAGCAGCAGTGGGACGGGGGGTGAGACGCTCCAGGCGCAAGTGCAGGCGGCCAGATGGGACATCCTCCAGGGTCAGCCACTGTGGAAGTAGGCAGGGTGAAGACTTGGGGATATGCAGACAGGAGAACTTTGAGAATGAAGCTTGGGCAGGATCAGGAGGGGTTGTTGACTCTAATTCAATGCTCACCTCATCAAGGAAGCCACTGTTTAAGACTGTGGTGAGACGCACTTTACACCTGTTGAAGAGAAAGATTAAGACAAAAGCTAGATGGTGAGAACCAAGGAGGCCAGACTCCATGGCCTAAAGAGCCCCAGCCTGTTTTTCACGTAGACTCCTATGCTCTCACCTGCCCAGAAAATCATCCTTGTCCAAGTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:56137886|56138272 hsa-miR-17-5p 0 0 1
chr12:56137886|56138272 hsa-miR-17-3p 0 0 1
chr12:56137886|56138272 hsa-miR-20a-5p 0 0 1
chr12:56137886|56138272 hsa-miR-20a-3p 0 0 1
chr12:56137886|56138272 hsa-miR-93-5p 0 0 1
chr12:56137886|56138272 hsa-miR-93-3p 0 0 1
chr12:56137886|56138272 hsa-miR-106a-5p 0 0 1
chr12:56137886|56138272 hsa-miR-106a-3p 0 0 1
chr12:56137886|56138272 hsa-miR-197-5p 0 0 1
chr12:56137886|56138272 hsa-miR-197-3p 0 0 1
chr12:56137886|56138272 hsa-miR-106b-5p 0 0 1
chr12:56137886|56138272 hsa-miR-106b-3p 0 0 1
chr12:56137886|56138272 hsa-miR-346 1 0 1
chr12:56137886|56138272 hsa-miR-20b-5p 0 0 1
chr12:56137886|56138272 hsa-miR-20b-3p 0 0 1
chr12:56137886|56138272 hsa-miR-448 0 0 1
chr12:56137886|56138272 hsa-miR-412-5p 0 0 1
chr12:56137886|56138272 hsa-miR-412-3p 0 0 1
chr12:56137886|56138272 hsa-miR-511-5p 0 0 1
chr12:56137886|56138272 hsa-miR-511-3p 0 0 1
chr12:56137886|56138272 hsa-miR-519d-5p 0 0 1
chr12:56137886|56138272 hsa-miR-519d-3p 0 0 1
chr12:56137886|56138272 hsa-miR-520g-5p 0 0 1
chr12:56137886|56138272 hsa-miR-520g-3p 0 0 1
chr12:56137886|56138272 hsa-miR-520h 0 0 1
chr12:56137886|56138272 hsa-miR-504-5p 0 0 1
chr12:56137886|56138272 hsa-miR-504-3p 0 0 1
chr12:56137886|56138272 hsa-miR-505-5p 0 0 1
chr12:56137886|56138272 hsa-miR-505-3p 0 0 1
chr12:56137886|56138272 hsa-miR-552-5p 0 0 1
chr12:56137886|56138272 hsa-miR-552-3p 0 0 1
chr12:56137886|56138272 hsa-miR-612 1 1 1
chr12:56137886|56138272 hsa-miR-632 0 0 1
chr12:56137886|56138272 hsa-miR-659-5p 0 0 1
chr12:56137886|56138272 hsa-miR-659-3p 0 0 1
chr12:56137886|56138272 hsa-miR-421 0 0 1
chr12:56137886|56138272 hsa-miR-1264 0 0 1
chr12:56137886|56138272 hsa-miR-1298-5p 0 0 1
chr12:56137886|56138272 hsa-miR-1298-3p 0 0 1
chr12:56137886|56138272 hsa-miR-765 0 0 1
chr12:56137886|56138272 hsa-miR-890 0 0 1
chr12:56137886|56138272 hsa-miR-877-5p 0 0 1
chr12:56137886|56138272 hsa-miR-877-3p 0 0 1
chr12:56137886|56138272 hsa-miR-1229-5p 0 0 1
chr12:56137886|56138272 hsa-miR-1229-3p 0 0 1
chr12:56137886|56138272 hsa-miR-1236-5p 0 0 1
chr12:56137886|56138272 hsa-miR-1236-3p 0 0 1
chr12:56137886|56138272 hsa-miR-1247-5p 0 0 1
chr12:56137886|56138272 hsa-miR-1247-3p 0 0 1
chr12:56137886|56138272 hsa-miR-1265 0 0 1
chr12:56137886|56138272 hsa-miR-513c-5p 0 0 1
chr12:56137886|56138272 hsa-miR-513c-3p 0 0 1
chr12:56137886|56138272 hsa-miR-125a-3p 1 1 1
chr12:56137886|56138272 hsa-miR-1289 0 0 1
chr12:56137886|56138272 hsa-miR-502-5p 0 0 1
chr12:56137886|56138272 hsa-miR-140-3p 0 1 1
chr12:56137886|56138272 hsa-miR-516a-3p 0 1 1
chr12:56137886|56138272 hsa-miR-220b 0 0 1
chr12:56137886|56138272 hsa-miR-371-5p 0 0 1
chr12:56137886|56138272 hsa-miR-128 0 0 1
chr12:56137886|56138272 hsa-miR-1285 0 0 1
chr12:56137886|56138272 hsa-miR-1254 0 0 1
chr12:56137886|56138272 hsa-miR-1295 0 0 1
chr12:56137886|56138272 hsa-miR-622 1 0 0
chr12:56137886|56138272 hsa-miR-661 1 0 0
chr12:56137886|56138272 hsa-miR-762 1 0 0
chr12:56137886|56138272 hsa-miR-1294 0 1 0
chr12:56137886|56138272 hsa-miR-3141 1 0 0
chr12:56137886|56138272 hsa-miR-3147 1 0 0
chr12:56137886|56138272 hsa-miR-4294 1 1 0
chr12:56137886|56138272 hsa-miR-4309 0 1 0
chr12:56137886|56138272 hsa-miR-4308 0 1 0
chr12:56137886|56138272 hsa-miR-4254 1 1 0
chr12:56137886|56138272 hsa-miR-3945 1 0 0
chr12:56137886|56138272 hsa-miR-4486 1 0 0
chr12:56137886|56138272 hsa-miR-2392 1 0 0
chr12:56137886|56138272 hsa-miR-4507 1 0 0
chr12:56137886|56138272 hsa-miR-4525 1 0 0
chr12:56137886|56138272 hsa-miR-5693 0 1 0
chr12:56137886|56138272 hsa-miR-5702 0 1 0
chr12:56137886|56138272 hsa-miR-5787 1 1 0
chr12:56137886|56138272 hsa-miR-6860 1 1 0
chr12:56137886|56138272 hsa-miR-9901 1 0 0
chr12:56137886|56138272 hsa-miR-15a-3p 0 1 0
chr12:56137886|56138272 hsa-miR-7155-5p 1 0 0
chr12:56137886|56138272 hsa-miR-6747-3p 0 1 0
chr12:56137886|56138272 hsa-miR-4665-3p 1 0 0
chr12:56137886|56138272 hsa-miR-4726-3p 1 0 0
chr12:56137886|56138272 hsa-miR-6861-5p 1 1 0
chr12:56137886|56138272 hsa-miR-6825-5p 1 0 0
chr12:56137886|56138272 hsa-miR-6894-5p 1 1 0
chr12:56137886|56138272 hsa-miR-3692-3p 0 1 0
chr12:56137886|56138272 hsa-miR-6799-5p 1 0 0
chr12:56137886|56138272 hsa-miR-6727-5p 1 0 0
chr12:56137886|56138272 hsa-miR-6721-5p 1 1 0
chr12:56137886|56138272 hsa-miR-191-3p 1 0 0
chr12:56137886|56138272 hsa-miR-8069 1 0 0
chr12:56137886|56138272 hsa-miR-3189-5p 1 0 0
chr12:56137886|56138272 hsa-miR-432-5p 1 0 0
chr12:56137886|56138272 hsa-miR-1915-5p 1 0 0
chr12:56137886|56138272 hsa-miR-3663-5p 0 1 0
chr12:56137886|56138272 hsa-miR-4725-5p 0 1 0
chr12:56137886|56138272 hsa-miR-185-3p 1 0 0
chr12:56137886|56138272 hsa-miR-4793-3p 0 1 0
chr12:56137886|56138272 hsa-miR-3691-3p 0 1 0
chr12:56137886|56138272 hsa-miR-1226-5p 1 0 0
chr12:56137886|56138272 hsa-miR-4793-5p 1 1 0
chr12:56137886|56138272 hsa-miR-4763-5p 1 0 0
chr12:56137886|56138272 hsa-miR-1908-3p 1 0 0
chr12:56137886|56138272 hsa-miR-4690-5p 1 0 0
chr12:56137886|56138272 hsa-miR-3191-5p 1 0 0
chr12:56137886|56138272 hsa-miR-6878-3p 0 1 0
chr12:56137886|56138272 hsa-miR-4667-3p 0 1 0
chr12:56137886|56138272 hsa-miR-7850-5p 1 0 0
chr12:56137886|56138272 hsa-miR-4776-5p 1 0 0
chr12:56137886|56138272 hsa-miR-3120-5p 1 0 0
chr12:56137886|56138272 hsa-miR-7106-3p 1 0 0
chr12:56137886|56138272 hsa-miR-660-3p 0 1 0
chr12:56137886|56138272 hsa-miR-6854-3p 1 1 0
chr12:56137886|56138272 hsa-miR-6793-3p 1 0 0
chr12:56137886|56138272 hsa-miR-597-3p 0 1 0
chr12:56137886|56138272 hsa-miR-1295b-3p 1 1 0
chr12:56137886|56138272 hsa-miR-216a-3p 0 1 0
chr12:56137886|56138272 hsa-miR-7151-5p 1 0 0
chr12:56137886|56138272 hsa-miR-6792-5p 1 0 0
chr12:56137886|56138272 hsa-miR-6802-3p 0 1 0
chr12:56137886|56138272 hsa-miR-3126-3p 0 1 0
chr12:56137886|56138272 hsa-miR-6748-3p 1 0 0
chr12:56137886|56138272 hsa-miR-3620-3p 0 1 0
chr12:56137886|56138272 hsa-miR-4433a-5p 1 0 0
chr12:56137886|56138272 hsa-miR-3173-5p 0 1 0
chr12:56137886|56138272 hsa-miR-6798-3p 1 1 0
chr12:56137886|56138272 hsa-miR-1207-5p 1 0 0
chr12:56137886|56138272 hsa-miR-4763-3p 1 0 0
chr12:56137886|56138272 hsa-miR-6778-5p 1 1 0
chr12:56137886|56138272 hsa-miR-6787-5p 1 0 0
chr12:56137886|56138272 hsa-miR-6893-5p 1 0 0
chr12:56137886|56138272 hsa-miR-5001-5p 1 0 0
chr12:56137886|56138272 hsa-miR-6756-5p 1 0 0
chr12:56137886|56138272 hsa-miR-6813-5p 1 0 0
chr12:56137886|56138272 hsa-miR-6774-5p 1 0 0
chr12:56137886|56138272 hsa-miR-6879-5p 1 0 0
chr12:56137886|56138272 hsa-miR-6754-3p 1 1 0
chr12:56137886|56138272 hsa-miR-3620-5p 1 0 0
chr12:56137886|56138272 hsa-miR-5189-5p 1 0 0
chr12:56137886|56138272 hsa-miR-6780b-5p 1 0 0
chr12:56137886|56138272 hsa-miR-1909-3p 1 0 0
chr12:56137886|56138272 hsa-miR-6735-5p 0 1 0
chr12:56137886|56138272 hsa-miR-6883-5p 1 0 0
chr12:56137886|56138272 hsa-miR-3187-5p 1 1 0
chr12:56137886|56138272 hsa-miR-3940-5p 1 0 0
chr12:56137886|56138272 hsa-miR-6791-3p 0 1 0
chr12:56137886|56138272 hsa-miR-7151-3p 1 0 0
chr12:56137886|56138272 hsa-miR-541-3p 0 1 0
chr12:56137886|56138272 hsa-miR-18b-5p 0 1 0
chr12:56137886|56138272 hsa-miR-6762-5p 1 0 0
chr12:56137886|56138272 hsa-miR-6511a-3p 0 1 0
chr12:56137886|56138272 hsa-miR-6756-3p 1 0 0
chr12:56137886|56138272 hsa-miR-4723-3p 1 0 0
chr12:56137886|56138272 hsa-miR-3085-3p 1 0 0
chr12:56137886|56138272 hsa-miR-6843-3p 0 1 0
chr12:56137886|56138272 hsa-miR-6503-5p 1 0 0
chr12:56137886|56138272 hsa-miR-5699-3p 0 1 0
chr12:56137886|56138272 hsa-miR-6834-3p 0 1 0
chr12:56137886|56138272 hsa-miR-3922-3p 0 1 0
chr12:56137886|56138272 hsa-miR-5571-5p 1 0 0
chr12:56137886|56138272 hsa-miR-3681-3p 0 1 0
chr12:56137886|56138272 hsa-miR-302a-5p 0 1 0
chr12:56137886|56138272 hsa-miR-516b-3p 0 1 0
chr12:56137886|56138272 hsa-miR-302b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr12:56137886|56138272
ORF Type ORF1
Protein Length 56
Nucleotide Length 171
Protein Sequence MGICRQENFENEAWAGSGGVVDSNSMLTSSRKPLFKTVVRRTLHLLKRKIKTKARW
Nucleotide Sequence TTGGGGATATGCAGACAGGAGAACTTTGAGAATGAAGCTTGGGCAGGATCAGGAGGGGTTGTTGACTCTAATTCAATGCTCACCTCATCAAGGAAGCCACTGTTTAAGACTGTGGTGAGACGCACTTTACACCTGTTGAAGAGAAAGATTAAGACAAAAGCTAGATGGTGA
CircID chr12:56137886|56138272
ORF Type ORF2
Protein Length 55
Nucleotide Length 168
Protein Sequence MGHPPGSATVEVGRVKTWGYADRRTLRMKLGQDQEGLLTLIQCSPHQGSHCLRLW
Nucleotide Sequence ATGGGACATCCTCCAGGGTCAGCCACTGTGGAAGTAGGCAGGGTGAAGACTTGGGGATATGCAGACAGGAGAACTTTGAGAATGAAGCTTGGGCAGGATCAGGAGGGGTTGTTGACTCTAATTCAATGCTCACCTCATCAAGGAAGCCACTGTTTAAGACTGTGGTGA
CircID chr12:56137886|56138272
ORF Type ORF3
Protein Length 103
Nucleotide Length 309
Protein Sequence MESGLLGSHHLAFVLIFLFNRCKVRLTTVLNSGFLDEVSIELESTTPPDPAQASFSKFSCLHIPKSSPCLLPQWLTLEDVPSGRLHLRLERLTPRPTAAELEE
Nucleotide Sequence ATGGAGTCTGGCCTCCTTGGTTCTCACCATCTAGCTTTTGTCTTAATCTTTCTCTTCAACAGGTGTAAAGTGCGTCTCACCACAGTCTTAAACAGTGGCTTCCTTGATGAGGTGAGCATTGAATTAGAGTCAACAACCCCTCCTGATCCTGCCCAAGCTTCATTCTCAAAGTTCTCCTGTCTGCATATCCCCAAGTCTTCACCCTGCCTACTTCCACAGTGGCTGACCCTGGAGGATGTCCCATCTGGCCGCCTGCACTTGCGCCTGGAGCGTCTCACCCCCCGTCCCACTGCTGCTGAGTTAGAGGAG
CircID chr12:56137886|56138272
ORF Type ORF4
Protein Length 32
Nucleotide Length 99
Protein Sequence MIFWAGESIGVYVKNRLGLFRPWSLASLVLTI
Nucleotide Sequence ATGATTTTCTGGGCAGGTGAGAGCATAGGAGTCTACGTGAAAAACAGGCTGGGGCTCTTTAGGCCATGGAGTCTGGCCTCCTTGGTTCTCACCATCTAG
CircID chr12:56137886|56138272
ORF Type ORF5
Protein Length 27
Nucleotide Length 84
Protein Sequence MILPKLHSQSSPVCISPSLHPAYFHSG
Nucleotide Sequence CTGATCCTGCCCAAGCTTCATTCTCAAAGTTCTCCTGTCTGCATATCCCCAAGTCTTCACCCTGCCTACTTCCACAGTGGCTGA
CircID chr12:56137886|56138272
ORF Type ORF6
Protein Length 40
Nucleotide Length 123
Protein Sequence MSAYPQVFTLPTSTVADPGGCPIWPPALAPGASHPPSHCC
Nucleotide Sequence CTGTCTGCATATCCCCAAGTCTTCACCCTGCCTACTTCCACAGTGGCTGACCCTGGAGGATGTCCCATCTGGCCGCCTGCACTTGCGCCTGGAGCGTCTCACCCCCCGTCCCACTGCTGCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab