CircRNA Information

General Information
circRNA Basic Information
CircID chr12:56143262|56143626
Strand +
CircType exon
Host Gene ENSG00000139641.11;
Algorism CIRI2;
Sequence CGGGCTACACCCTGGGAAAGGTCTGTCTCAGCTAGGTCCAGCTGCACCTGTGTTGGAAGATGATAGGGGAAAGATGTTATTTCTTTTATTTTTTGAGACAGGATCTCATTCTGATGATGCTGTTTTGAAATCTCCAAAGACCATGTTCCTTCATCACATACTCGTCCCAAACCATTGCAGAGGTGAGTCACCTCTAAAGGATCACGTGGGGTACTTCCTTCCTCACAGGGACTATAACCTTGGTGCCAGCAGCTTCCAGCCCTCACCTCTGCCCTGCCATCCTGCCCTCTTACCTTCCCCAGCAGCTCACGCTCTCTTGACATGAAGGAGGAATTAGACTTGACAGAGACATCCAGCTTTCGTCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:56143262|56143626 hsa-miR-205-5p 0 0 1
chr12:56143262|56143626 hsa-miR-205-3p 0 0 1
chr12:56143262|56143626 hsa-miR-154-5p 0 0 1
chr12:56143262|56143626 hsa-miR-154-3p 0 0 1
chr12:56143262|56143626 hsa-miR-320a-5p 0 0 1
chr12:56143262|56143626 hsa-miR-320a-3p 0 0 1
chr12:56143262|56143626 hsa-miR-335-5p 0 0 1
chr12:56143262|56143626 hsa-miR-335-3p 0 0 1
chr12:56143262|56143626 hsa-miR-492 0 0 1
chr12:56143262|56143626 hsa-miR-552-5p 0 0 1
chr12:56143262|56143626 hsa-miR-552-3p 0 0 1
chr12:56143262|56143626 hsa-miR-558 1 1 1
chr12:56143262|56143626 hsa-miR-593-5p 0 0 1
chr12:56143262|56143626 hsa-miR-593-3p 0 0 1
chr12:56143262|56143626 hsa-miR-607 0 0 1
chr12:56143262|56143626 hsa-miR-620 0 0 1
chr12:56143262|56143626 hsa-miR-662 0 0 1
chr12:56143262|56143626 hsa-miR-1323 0 0 1
chr12:56143262|56143626 hsa-miR-1301-5p 0 0 1
chr12:56143262|56143626 hsa-miR-1301-3p 0 0 1
chr12:56143262|56143626 hsa-miR-877-5p 0 0 1
chr12:56143262|56143626 hsa-miR-877-3p 0 0 1
chr12:56143262|56143626 hsa-miR-1287-5p 0 0 1
chr12:56143262|56143626 hsa-miR-1287-3p 0 0 1
chr12:56143262|56143626 hsa-miR-1294 0 0 1
chr12:56143262|56143626 hsa-miR-1303 0 0 1
chr12:56143262|56143626 hsa-miR-548o-3p 0 0 1
chr12:56143262|56143626 hsa-miR-1270 0 0 1
chr12:56143262|56143626 hsa-miR-1252-5p 0 0 1
chr12:56143262|56143626 hsa-miR-1252-3p 0 0 1
chr12:56143262|56143626 hsa-miR-548o 0 0 1
chr12:56143262|56143626 hsa-miR-671-5p 1 0 1
chr12:56143262|56143626 hsa-miR-339-5p 0 0 1
chr12:56143262|56143626 hsa-miR-501-5p 0 0 1
chr12:56143262|56143626 hsa-miR-1207-3p 0 1 1
chr12:56143262|56143626 hsa-miR-1207-5p 1 1 1
chr12:56143262|56143626 hsa-miR-320b 0 0 1
chr12:56143262|56143626 hsa-miR-320c 0 0 1
chr12:56143262|56143626 hsa-miR-1302 0 0 1
chr12:56143262|56143626 hsa-miR-320d 0 0 1
chr12:56143262|56143626 hsa-miR-371-5p 0 0 1
chr12:56143262|56143626 hsa-miR-1274a 0 0 1
chr12:56143262|56143626 hsa-miR-1274b 0 0 1
chr12:56143262|56143626 hsa-miR-9 0 0 1
chr12:56143262|56143626 hsa-miR-768-5p 0 0 1
chr12:56143262|56143626 hsa-miR-602 1 0 0
chr12:56143262|56143626 hsa-miR-612 1 0 0
chr12:56143262|56143626 hsa-miR-637 1 0 0
chr12:56143262|56143626 hsa-miR-638 1 0 0
chr12:56143262|56143626 hsa-miR-663a 1 0 0
chr12:56143262|56143626 hsa-miR-658 1 0 0
chr12:56143262|56143626 hsa-miR-762 1 1 0
chr12:56143262|56143626 hsa-miR-1268a 1 0 0
chr12:56143262|56143626 hsa-miR-3132 1 0 0
chr12:56143262|56143626 hsa-miR-3141 1 0 0
chr12:56143262|56143626 hsa-miR-3147 1 0 0
chr12:56143262|56143626 hsa-miR-1193 1 0 0
chr12:56143262|56143626 hsa-miR-4257 1 1 0
chr12:56143262|56143626 hsa-miR-4271 1 1 0
chr12:56143262|56143626 hsa-miR-3652 1 0 0
chr12:56143262|56143626 hsa-miR-3945 1 1 0
chr12:56143262|56143626 hsa-miR-1268b 1 0 0
chr12:56143262|56143626 hsa-miR-4481 1 0 0
chr12:56143262|56143626 hsa-miR-4487 1 0 0
chr12:56143262|56143626 hsa-miR-4498 1 1 0
chr12:56143262|56143626 hsa-miR-2392 1 1 0
chr12:56143262|56143626 hsa-miR-4516 1 0 0
chr12:56143262|56143626 hsa-miR-4525 1 0 0
chr12:56143262|56143626 hsa-miR-4533 0 1 0
chr12:56143262|56143626 hsa-miR-4534 1 0 0
chr12:56143262|56143626 hsa-miR-4535 1 1 0
chr12:56143262|56143626 hsa-miR-1587 1 0 0
chr12:56143262|56143626 hsa-miR-4651 1 0 0
chr12:56143262|56143626 hsa-miR-4656 1 0 0
chr12:56143262|56143626 hsa-miR-4658 1 0 0
chr12:56143262|56143626 hsa-miR-4688 1 0 0
chr12:56143262|56143626 hsa-miR-4710 1 1 0
chr12:56143262|56143626 hsa-miR-4721 1 1 0
chr12:56143262|56143626 hsa-miR-4736 1 0 0
chr12:56143262|56143626 hsa-miR-4739 1 0 0
chr12:56143262|56143626 hsa-miR-4767 1 0 0
chr12:56143262|56143626 hsa-miR-5090 1 1 0
chr12:56143262|56143626 hsa-miR-5698 1 0 0
chr12:56143262|56143626 hsa-miR-5787 1 0 0
chr12:56143262|56143626 hsa-miR-6079 0 1 0
chr12:56143262|56143626 hsa-miR-6090 1 0 0
chr12:56143262|56143626 hsa-miR-6127 1 0 0
chr12:56143262|56143626 hsa-miR-6132 1 1 0
chr12:56143262|56143626 hsa-miR-6133 1 0 0
chr12:56143262|56143626 hsa-miR-6860 1 0 0
chr12:56143262|56143626 hsa-miR-7150 1 1 0
chr12:56143262|56143626 hsa-miR-8089 1 1 0
chr12:56143262|56143626 hsa-miR-12120 0 1 0
chr12:56143262|56143626 hsa-miR-141-5p 0 1 0
chr12:56143262|56143626 hsa-miR-370-3p 1 0 0
chr12:56143262|56143626 hsa-miR-4731-5p 1 0 0
chr12:56143262|56143626 hsa-miR-504-3p 1 0 0
chr12:56143262|56143626 hsa-miR-4433a-3p 1 0 0
chr12:56143262|56143626 hsa-miR-6861-5p 1 0 0
chr12:56143262|56143626 hsa-miR-6825-5p 1 0 0
chr12:56143262|56143626 hsa-miR-6894-5p 1 0 0
chr12:56143262|56143626 hsa-miR-6857-5p 1 0 0
chr12:56143262|56143626 hsa-miR-125a-3p 1 0 0
chr12:56143262|56143626 hsa-miR-25-5p 1 0 0
chr12:56143262|56143626 hsa-miR-6799-5p 1 0 0
chr12:56143262|56143626 hsa-miR-3692-5p 1 1 0
chr12:56143262|56143626 hsa-miR-6833-5p 1 0 0
chr12:56143262|56143626 hsa-miR-6089 1 0 0
chr12:56143262|56143626 hsa-miR-6757-5p 1 0 0
chr12:56143262|56143626 hsa-miR-6880-5p 1 0 0
chr12:56143262|56143626 hsa-miR-4695-5p 1 0 0
chr12:56143262|56143626 hsa-miR-6867-5p 1 1 0
chr12:56143262|56143626 hsa-miR-4722-5p 1 0 0
chr12:56143262|56143626 hsa-miR-6730-5p 1 0 0
chr12:56143262|56143626 hsa-miR-7160-5p 1 0 0
chr12:56143262|56143626 hsa-miR-6820-5p 1 0 0
chr12:56143262|56143626 hsa-miR-6727-5p 1 0 0
chr12:56143262|56143626 hsa-miR-6721-5p 1 0 0
chr12:56143262|56143626 hsa-miR-197-5p 1 0 0
chr12:56143262|56143626 hsa-miR-8069 1 0 0
chr12:56143262|56143626 hsa-miR-5589-5p 1 0 0
chr12:56143262|56143626 hsa-miR-6768-5p 0 1 0
chr12:56143262|56143626 hsa-miR-6772-5p 0 1 0
chr12:56143262|56143626 hsa-miR-6829-5p 1 0 0
chr12:56143262|56143626 hsa-miR-6732-5p 1 0 0
chr12:56143262|56143626 hsa-miR-3190-3p 1 0 0
chr12:56143262|56143626 hsa-miR-6805-5p 1 0 0
chr12:56143262|56143626 hsa-miR-6798-5p 1 0 0
chr12:56143262|56143626 hsa-miR-2467-3p 1 1 0
chr12:56143262|56143626 hsa-miR-6810-5p 1 0 0
chr12:56143262|56143626 hsa-miR-5006-5p 1 0 0
chr12:56143262|56143626 hsa-miR-6786-5p 1 0 0
chr12:56143262|56143626 hsa-miR-1226-5p 1 1 0
chr12:56143262|56143626 hsa-miR-6740-5p 1 1 0
chr12:56143262|56143626 hsa-miR-1229-5p 1 0 0
chr12:56143262|56143626 hsa-miR-4640-5p 1 0 0
chr12:56143262|56143626 hsa-miR-7161-3p 0 1 0
chr12:56143262|56143626 hsa-miR-1228-5p 1 0 0
chr12:56143262|56143626 hsa-miR-296-3p 1 0 0
chr12:56143262|56143626 hsa-miR-6771-5p 1 0 0
chr12:56143262|56143626 hsa-miR-6823-5p 1 0 0
chr12:56143262|56143626 hsa-miR-3677-3p 1 0 0
chr12:56143262|56143626 hsa-miR-4732-5p 1 0 0
chr12:56143262|56143626 hsa-miR-4743-5p 1 0 0
chr12:56143262|56143626 hsa-miR-3160-3p 1 0 0
chr12:56143262|56143626 hsa-miR-3690 0 1 0
chr12:56143262|56143626 hsa-miR-4446-3p 0 1 0
chr12:56143262|56143626 hsa-miR-149-3p 1 0 0
chr12:56143262|56143626 hsa-miR-6824-5p 1 0 0
chr12:56143262|56143626 hsa-miR-6802-5p 1 0 0
chr12:56143262|56143626 hsa-miR-6781-5p 1 0 0
chr12:56143262|56143626 hsa-miR-5010-5p 1 0 0
chr12:56143262|56143626 hsa-miR-7112-5p 1 0 0
chr12:56143262|56143626 hsa-miR-423-5p 1 0 0
chr12:56143262|56143626 hsa-miR-3944-5p 0 1 0
chr12:56143262|56143626 hsa-miR-208a-5p 1 0 0
chr12:56143262|56143626 hsa-miR-4773 0 1 0
chr12:56143262|56143626 hsa-miR-744-5p 1 0 0
chr12:56143262|56143626 hsa-miR-6801-5p 1 0 0
chr12:56143262|56143626 hsa-miR-4649-3p 0 1 0
chr12:56143262|56143626 hsa-miR-4524a-3p 0 1 0
chr12:56143262|56143626 hsa-miR-10400-5p 1 0 0
chr12:56143262|56143626 hsa-miR-1233-5p 1 0 0
chr12:56143262|56143626 hsa-miR-4763-3p 1 1 0
chr12:56143262|56143626 hsa-miR-6778-5p 1 1 0
chr12:56143262|56143626 hsa-miR-6787-5p 1 0 0
chr12:56143262|56143626 hsa-miR-6816-5p 1 0 0
chr12:56143262|56143626 hsa-miR-6870-5p 1 0 0
chr12:56143262|56143626 hsa-miR-6775-5p 1 1 0
chr12:56143262|56143626 hsa-miR-1343-5p 1 0 0
chr12:56143262|56143626 hsa-miR-5001-5p 1 1 0
chr12:56143262|56143626 hsa-miR-6726-5p 1 0 0
chr12:56143262|56143626 hsa-miR-6743-5p 1 0 0
chr12:56143262|56143626 hsa-miR-6754-5p 1 0 0
chr12:56143262|56143626 hsa-miR-6803-5p 1 0 0
chr12:56143262|56143626 hsa-miR-6819-5p 1 0 0
chr12:56143262|56143626 hsa-miR-11181-3p 1 0 0
chr12:56143262|56143626 hsa-miR-6722-3p 1 0 0
chr12:56143262|56143626 hsa-miR-6751-5p 1 0 0
chr12:56143262|56143626 hsa-miR-6763-5p 1 0 0
chr12:56143262|56143626 hsa-miR-6779-5p 1 0 0
chr12:56143262|56143626 hsa-miR-6780a-5p 1 0 0
chr12:56143262|56143626 hsa-miR-6797-5p 1 0 0
chr12:56143262|56143626 hsa-miR-6808-5p 1 0 0
chr12:56143262|56143626 hsa-miR-6879-5p 1 1 0
chr12:56143262|56143626 hsa-miR-7111-5p 1 0 0
chr12:56143262|56143626 hsa-miR-3620-5p 1 0 0
chr12:56143262|56143626 hsa-miR-4728-5p 1 1 0
chr12:56143262|56143626 hsa-miR-5196-5p 1 1 0
chr12:56143262|56143626 hsa-miR-6780b-5p 1 1 0
chr12:56143262|56143626 hsa-miR-6836-5p 1 1 0
chr12:56143262|56143626 hsa-miR-10396b-5p 1 0 0
chr12:56143262|56143626 hsa-miR-10526-3p 1 0 0
chr12:56143262|56143626 hsa-miR-1909-3p 1 0 0
chr12:56143262|56143626 hsa-miR-328-5p 1 0 0
chr12:56143262|56143626 hsa-miR-4632-5p 1 1 0
chr12:56143262|56143626 hsa-miR-4649-5p 1 0 0
chr12:56143262|56143626 hsa-miR-4725-3p 1 1 0
chr12:56143262|56143626 hsa-miR-4749-5p 1 0 0
chr12:56143262|56143626 hsa-miR-6729-5p 1 0 0
chr12:56143262|56143626 hsa-miR-6735-5p 1 1 0
chr12:56143262|56143626 hsa-miR-6846-5p 1 0 0
chr12:56143262|56143626 hsa-miR-6848-5p 1 0 0
chr12:56143262|56143626 hsa-miR-6858-5p 1 0 0
chr12:56143262|56143626 hsa-miR-6883-5p 1 0 0
chr12:56143262|56143626 hsa-miR-3187-5p 1 0 0
chr12:56143262|56143626 hsa-miR-4436b-3p 0 1 0
chr12:56143262|56143626 hsa-miR-6831-5p 1 0 0
chr12:56143262|56143626 hsa-miR-939-5p 1 0 0
chr12:56143262|56143626 hsa-miR-4758-5p 1 0 0
chr12:56143262|56143626 hsa-miR-4769-5p 1 0 0
chr12:56143262|56143626 hsa-miR-6511a-5p 0 1 0
chr12:56143262|56143626 hsa-miR-3940-5p 1 0 0
chr12:56143262|56143626 hsa-miR-7843-5p 0 1 0
chr12:56143262|56143626 hsa-miR-6736-5p 1 0 0
chr12:56143262|56143626 hsa-miR-4700-5p 1 1 0
chr12:56143262|56143626 hsa-miR-6891-5p 1 0 0
chr12:56143262|56143626 hsa-miR-6785-5p 1 0 0
chr12:56143262|56143626 hsa-miR-4667-5p 1 1 0
chr12:56143262|56143626 hsa-miR-6790-5p 1 0 0
chr12:56143262|56143626 hsa-miR-4756-5p 1 0 0
chr12:56143262|56143626 hsa-miR-6859-5p 1 0 0
chr12:56143262|56143626 hsa-miR-4691-5p 1 0 0
chr12:56143262|56143626 hsa-miR-6764-5p 0 1 0
chr12:56143262|56143626 hsa-miR-3913-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr12:56143262|56143626
ORF Type ORF1
Protein Length 30
Nucleotide Length 90
Protein Sequence MPSCPLTFPSSSRSLDMKEELDLTETSSFR
Nucleotide Sequence CTGCCATCCTGCCCTCTTACCTTCCCCAGCAGCTCACGCTCTCTTGACATGAAGGAGGAATTAGACTTGACAGAGACATCCAGCTTTCGT

CircID chr12:56143262|56143626
ORF Type ORF2
Protein Length 100
Nucleotide Length 303
Protein Sequence MSQLGPAAPVLEDDRGKMLFLLFFETGSHSDDAVLKSPKTMFLHHILVPNHCRGESPLKDHVGYFLPHRDYNLGASSFQPSPLPCHPALLPSPAAHALLT
Nucleotide Sequence CTGTCTCAGCTAGGTCCAGCTGCACCTGTGTTGGAAGATGATAGGGGAAAGATGTTATTTCTTTTATTTTTTGAGACAGGATCTCATTCTGATGATGCTGTTTTGAAATCTCCAAAGACCATGTTCCTTCATCACATACTCGTCCCAAACCATTGCAGAGGTGAGTCACCTCTAAAGGATCACGTGGGGTACTTCCTTCCTCACAGGGACTATAACCTTGGTGCCAGCAGCTTCCAGCCCTCACCTCTGCCCTGCCATCCTGCCCTCTTACCTTCCCCAGCAGCTCACGCTCTCTTGACATGA

CircID chr12:56143262|56143626
ORF Type ORF3
Protein Length 28
Nucleotide Length 87
Protein Sequence MHLCWKMIGERCYFFYFLRQDLILMMLF
Nucleotide Sequence CTGCACCTGTGTTGGAAGATGATAGGGGAAAGATGTTATTTCTTTTATTTTTTGAGACAGGATCTCATTCTGATGATGCTGTTTTGA

CircID chr12:56143262|56143626
ORF Type ORF4
Protein Length 26
Nucleotide Length 81
Protein Sequence MVPAASSPHLCPAILPSYLPQQLTLS
Nucleotide Sequence TTGGTGCCAGCAGCTTCCAGCCCTCACCTCTGCCCTGCCATCCTGCCCTCTTACCTTCCCCAGCAGCTCACGCTCTCTTGA

CircID chr12:56143262|56143626
ORF Type ORF5
Protein Length 118
Nucleotide Length 354
Protein Sequence MDVSVKSNSSFMSRERELLGKVRGQDGRAEVRAGSCWHQGYSPCEEGSTPRDPLEVTHLCNGLGRVCDEGTWSLEISKQHHQNEILSQKIKEITSFPYHLPTQVQLDLAETDLSQGVA
Nucleotide Sequence CTGGATGTCTCTGTCAAGTCTAATTCCTCCTTCATGTCAAGAGAGCGTGAGCTGCTGGGGAAGGTAAGAGGGCAGGATGGCAGGGCAGAGGTGAGGGCTGGAAGCTGCTGGCACCAAGGTTATAGTCCCTGTGAGGAAGGAAGTACCCCACGTGATCCTTTAGAGGTGACTCACCTCTGCAATGGTTTGGGACGAGTATGTGATGAAGGAACATGGTCTTTGGAGATTTCAAAACAGCATCATCAGAATGAGATCCTGTCTCAAAAAATAAAAGAAATAACATCTTTCCCCTATCATCTTCCAACACAGGTGCAGCTGGACCTAGCTGAGACAGACCTTTCCCAGGGTGTAGCC

CircID chr12:56143262|56143626
ORF Type ORF6
Protein Length 29
Nucleotide Length 90
Protein Sequence MVWDEYVMKEHGLWRFQNSIIRMRSCLKK
Nucleotide Sequence ATGGTTTGGGACGAGTATGTGATGAAGGAACATGGTCTTTGGAGATTTCAAAACAGCATCATCAGAATGAGATCCTGTCTCAAAAAATAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites