CircRNA Information

General Information
circRNA Basic Information
CircID chr12:56159691|56160053
Strand -
CircType exon
Host Gene ENSG00000092841.17;
Algorism CIRI2;
Sequence GCCGAGGTGCTCAAGGTCCTGGGGAACCCCAAGAGTGATGGTGAGGGGCCTAAAGAACAACTCCTCAGTGTGGTCATGGGCCCACAGTTCTTCAGCTAAGAGCTTCCCTTTATCTTCATAGGCCCCAAACTCAAGCAAGTCTGGATTAGCAAATCCCATGGATTTCCTTGCTTTTAGTGGGGAGTCATCTGTCATCTCTCTGTTCAGTTGAGGTCTCTATAATCCCCTGTCCTGAGAACTTGTGTTACTTCTCTGGCCTGACACTTCCACCTCCTTTATGGCAGAGATGAATGTGAAGGTGCTGGACTTTGAGCACTTTCTGCCCATGCTGCAGACAGTGGCCAAGAACAAGGACCAGGGCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:56159691|56160053 hsa-miR-17-5p 0 0 1
chr12:56159691|56160053 hsa-miR-17-3p 0 0 1
chr12:56159691|56160053 hsa-miR-20a-5p 0 0 1
chr12:56159691|56160053 hsa-miR-20a-3p 0 0 1
chr12:56159691|56160053 hsa-miR-23a-5p 0 0 1
chr12:56159691|56160053 hsa-miR-23a-3p 0 0 1
chr12:56159691|56160053 hsa-miR-93-5p 0 0 1
chr12:56159691|56160053 hsa-miR-93-3p 0 0 1
chr12:56159691|56160053 hsa-miR-106a-5p 0 0 1
chr12:56159691|56160053 hsa-miR-106a-3p 0 0 1
chr12:56159691|56160053 hsa-miR-107 0 0 1
chr12:56159691|56160053 hsa-miR-181c-5p 0 0 1
chr12:56159691|56160053 hsa-miR-181c-3p 0 0 1
chr12:56159691|56160053 hsa-miR-23b-5p 0 0 1
chr12:56159691|56160053 hsa-miR-23b-3p 0 0 1
chr12:56159691|56160053 hsa-miR-143-5p 0 0 1
chr12:56159691|56160053 hsa-miR-143-3p 0 0 1
chr12:56159691|56160053 hsa-miR-106b-5p 0 0 1
chr12:56159691|56160053 hsa-miR-106b-3p 0 0 1
chr12:56159691|56160053 hsa-miR-302a-5p 0 0 1
chr12:56159691|56160053 hsa-miR-302a-3p 0 0 1
chr12:56159691|56160053 hsa-miR-302b-5p 0 0 1
chr12:56159691|56160053 hsa-miR-302b-3p 0 0 1
chr12:56159691|56160053 hsa-miR-302c-5p 0 0 1
chr12:56159691|56160053 hsa-miR-302c-3p 0 0 1
chr12:56159691|56160053 hsa-miR-302d-5p 0 0 1
chr12:56159691|56160053 hsa-miR-302d-3p 0 0 1
chr12:56159691|56160053 hsa-miR-372-5p 0 0 1
chr12:56159691|56160053 hsa-miR-372-3p 0 0 1
chr12:56159691|56160053 hsa-miR-373-5p 0 0 1
chr12:56159691|56160053 hsa-miR-373-3p 0 0 1
chr12:56159691|56160053 hsa-miR-346 0 0 1
chr12:56159691|56160053 hsa-miR-20b-5p 0 0 1
chr12:56159691|56160053 hsa-miR-20b-3p 0 0 1
chr12:56159691|56160053 hsa-miR-181d-5p 0 0 1
chr12:56159691|56160053 hsa-miR-181d-3p 0 0 1
chr12:56159691|56160053 hsa-miR-520e-5p 0 0 1
chr12:56159691|56160053 hsa-miR-520e-3p 0 0 1
chr12:56159691|56160053 hsa-miR-520b-5p 0 0 1
chr12:56159691|56160053 hsa-miR-520b-3p 0 0 1
chr12:56159691|56160053 hsa-miR-519d-5p 0 0 1
chr12:56159691|56160053 hsa-miR-519d-3p 0 0 1
chr12:56159691|56160053 hsa-miR-520g-5p 0 0 1
chr12:56159691|56160053 hsa-miR-520g-3p 0 0 1
chr12:56159691|56160053 hsa-miR-520h 0 0 1
chr12:56159691|56160053 hsa-miR-577 0 0 1
chr12:56159691|56160053 hsa-miR-588 0 0 1
chr12:56159691|56160053 hsa-miR-632 0 0 1
chr12:56159691|56160053 hsa-miR-635 0 0 1
chr12:56159691|56160053 hsa-miR-802 0 0 1
chr12:56159691|56160053 hsa-miR-874-5p 0 0 1
chr12:56159691|56160053 hsa-miR-874-3p 0 0 1
chr12:56159691|56160053 hsa-miR-1205 0 0 1
chr12:56159691|56160053 hsa-miR-1266-5p 0 0 1
chr12:56159691|56160053 hsa-miR-1266-3p 0 0 1
chr12:56159691|56160053 hsa-miR-302e 0 0 1
chr12:56159691|56160053 hsa-miR-769-5p 0 0 1
chr12:56159691|56160053 hsa-miR-296-5p 1 0 1
chr12:56159691|56160053 hsa-miR-146b-3p 0 0 1
chr12:56159691|56160053 hsa-miR-1184 0 0 1
chr12:56159691|56160053 hsa-miR-338-3p 0 0 1
chr12:56159691|56160053 hsa-miR-520d-3p 0 0 1
chr12:56159691|56160053 hsa-miR-520a-3p 0 0 1
chr12:56159691|56160053 hsa-miR-520c-3p 0 0 1
chr12:56159691|56160053 hsa-miR-103 0 0 1
chr12:56159691|56160053 hsa-miR-181a 0 0 1
chr12:56159691|56160053 hsa-miR-181b 0 0 1
chr12:56159691|56160053 hsa-miR-1295 0 0 1
chr12:56159691|56160053 hsa-miR-617 0 1 0
chr12:56159691|56160053 hsa-miR-3132 0 1 0
chr12:56159691|56160053 hsa-miR-3137 0 1 0
chr12:56159691|56160053 hsa-miR-3138 1 0 0
chr12:56159691|56160053 hsa-miR-3170 0 1 0
chr12:56159691|56160053 hsa-miR-4296 0 1 0
chr12:56159691|56160053 hsa-miR-4318 0 1 0
chr12:56159691|56160053 hsa-miR-4322 0 1 0
chr12:56159691|56160053 hsa-miR-4260 0 1 0
chr12:56159691|56160053 hsa-miR-4252 0 1 0
chr12:56159691|56160053 hsa-miR-4265 0 1 0
chr12:56159691|56160053 hsa-miR-4436a 0 1 0
chr12:56159691|56160053 hsa-miR-4450 0 1 0
chr12:56159691|56160053 hsa-miR-4511 0 1 0
chr12:56159691|56160053 hsa-miR-4522 1 0 0
chr12:56159691|56160053 hsa-miR-4641 1 1 0
chr12:56159691|56160053 hsa-miR-4651 1 0 0
chr12:56159691|56160053 hsa-miR-4739 1 1 0
chr12:56159691|56160053 hsa-miR-5683 0 1 0
chr12:56159691|56160053 hsa-miR-8089 1 0 0
chr12:56159691|56160053 hsa-miR-12114 1 1 0
chr12:56159691|56160053 hsa-miR-134-3p 0 1 0
chr12:56159691|56160053 hsa-miR-6840-3p 0 1 0
chr12:56159691|56160053 hsa-miR-1972 1 1 0
chr12:56159691|56160053 hsa-miR-6799-5p 1 0 0
chr12:56159691|56160053 hsa-miR-6089 1 0 0
chr12:56159691|56160053 hsa-miR-6873-5p 0 1 0
chr12:56159691|56160053 hsa-miR-6721-5p 1 1 0
chr12:56159691|56160053 hsa-miR-4677-5p 0 1 0
chr12:56159691|56160053 hsa-miR-197-5p 1 0 0
chr12:56159691|56160053 hsa-miR-6732-5p 1 0 0
chr12:56159691|56160053 hsa-miR-3190-3p 1 1 0
chr12:56159691|56160053 hsa-miR-6884-3p 0 1 0
chr12:56159691|56160053 hsa-miR-6740-5p 0 1 0
chr12:56159691|56160053 hsa-miR-3677-3p 1 0 0
chr12:56159691|56160053 hsa-miR-4743-5p 1 0 0
chr12:56159691|56160053 hsa-miR-181b-5p 1 1 0
chr12:56159691|56160053 hsa-miR-4724-5p 0 1 0
chr12:56159691|56160053 hsa-miR-7151-5p 1 0 0
chr12:56159691|56160053 hsa-miR-5089-5p 0 1 0
chr12:56159691|56160053 hsa-miR-181a-5p 0 1 0
chr12:56159691|56160053 hsa-miR-6790-3p 1 0 0
chr12:56159691|56160053 hsa-miR-499b-5p 0 1 0
chr12:56159691|56160053 hsa-miR-2116-5p 0 1 0
chr12:56159691|56160053 hsa-miR-4763-3p 1 0 0
chr12:56159691|56160053 hsa-miR-6769b-5p 1 0 0
chr12:56159691|56160053 hsa-miR-1343-5p 1 0 0
chr12:56159691|56160053 hsa-miR-6752-5p 1 0 0
chr12:56159691|56160053 hsa-miR-6803-5p 1 0 0
chr12:56159691|56160053 hsa-miR-6815-5p 1 0 0
chr12:56159691|56160053 hsa-miR-6819-5p 1 0 0
chr12:56159691|56160053 hsa-miR-6851-5p 1 1 0
chr12:56159691|56160053 hsa-miR-11181-3p 1 0 0
chr12:56159691|56160053 hsa-miR-6875-5p 1 0 0
chr12:56159691|56160053 hsa-miR-7111-5p 1 0 0
chr12:56159691|56160053 hsa-miR-6780b-5p 1 0 0
chr12:56159691|56160053 hsa-miR-6836-5p 1 0 0
chr12:56159691|56160053 hsa-miR-4632-5p 1 0 0
chr12:56159691|56160053 hsa-miR-939-5p 1 0 0
chr12:56159691|56160053 hsa-miR-6773-5p 0 1 0
chr12:56159691|56160053 hsa-miR-6855-5p 1 1 0
chr12:56159691|56160053 hsa-miR-3173-3p 1 1 0
chr12:56159691|56160053 hsa-miR-6891-5p 0 1 0
chr12:56159691|56160053 hsa-miR-6750-5p 1 0 0
chr12:56159691|56160053 hsa-miR-3689d 0 1 0
chr12:56159691|56160053 hsa-miR-6724-5p 1 0 0
chr12:56159691|56160053 hsa-miR-6791-5p 1 0 0
chr12:56159691|56160053 hsa-miR-6511a-3p 0 1 0
chr12:56159691|56160053 hsa-miR-3059-5p 1 0 0
chr12:56159691|56160053 hsa-miR-6511b-3p 0 1 0
chr12:56159691|56160053 hsa-miR-6859-5p 1 0 0
chr12:56159691|56160053 hsa-miR-6817-5p 1 1 0
chr12:56159691|56160053 hsa-miR-99b-3p 1 0 0
chr12:56159691|56160053 hsa-miR-548ao-5p 0 1 0
chr12:56159691|56160053 hsa-miR-4735-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr12:56159691|56160053
ORF Type ORF1
Protein Length 26
Nucleotide Length 81
Protein Sequence MGNPKSDGEGPKEQLLSVVMGPQFFS
Nucleotide Sequence CTGGGGAACCCCAAGAGTGATGGTGAGGGGCCTAAAGAACAACTCCTCAGTGTGGTCATGGGCCCACAGTTCTTCAGCTAA

CircID chr12:56159691|56160053
ORF Type ORF2
Protein Length 27
Nucleotide Length 84
Protein Sequence MVRGLKNNSSVWSWAHSSSAKSFPLSS
Nucleotide Sequence ATGGTGAGGGGCCTAAAGAACAACTCCTCAGTGTGGTCATGGGCCCACAGTTCTTCAGCTAAGAGCTTCCCTTTATCTTCATAG

CircID chr12:56159691|56160053
ORF Type ORF3
Protein Length 28
Nucleotide Length 84
Protein Sequence MAEMNVKVLDFEHFLPMLQTVAKNKDQG
Nucleotide Sequence ATGGCAGAGATGAATGTGAAGGTGCTGGACTTTGAGCACTTTCTGCCCATGCTGCAGACAGTGGCCAAGAACAAGGACCAGGGC

CircID chr12:56159691|56160053
ORF Type ORF4
Protein Length 40
Nucleotide Length 123
Protein Sequence MLLVGSHLSSLCSVEVSIIPCPENLCYFSGLTLPPPLWQR
Nucleotide Sequence TTGCTTTTAGTGGGGAGTCATCTGTCATCTCTCTGTTCAGTTGAGGTCTCTATAATCCCCTGTCCTGAGAACTTGTGTTACTTCTCTGGCCTGACACTTCCACCTCCTTTATGGCAGAGATGA

CircID chr12:56159691|56160053
ORF Type ORF5
Protein Length 44
Nucleotide Length 135
Protein Sequence MFLATVCSMGRKCSKSSTFTFISAIKEVEVSGQRSNTSSQDRGL
Nucleotide Sequence TTGTTCTTGGCCACTGTCTGCAGCATGGGCAGAAAGTGCTCAAAGTCCAGCACCTTCACATTCATCTCTGCCATAAAGGAGGTGGAAGTGTCAGGCCAGAGAAGTAACACAAGTTCTCAGGACAGGGGATTATAG

CircID chr12:56159691|56160053
ORF Type ORF6
Protein Length 69
Nucleotide Length 207
Protein Sequence MNREMTDDSPLKARKSMGFANPDLLEFGAYEDKGKLLAEELWAHDHTEELFFRPLTITLGVPQDLEHLG
Nucleotide Sequence CTGAACAGAGAGATGACAGATGACTCCCCACTAAAAGCAAGGAAATCCATGGGATTTGCTAATCCAGACTTGCTTGAGTTTGGGGCCTATGAAGATAAAGGGAAGCTCTTAGCTGAAGAACTGTGGGCCCATGACCACACTGAGGAGTTGTTCTTTAGGCCCCTCACCATCACTCTTGGGGTTCCCCAGGACCTTGAGCACCTCGGC

CircID chr12:56159691|56160053
ORF Type ORF7
Protein Length 31
Nucleotide Length 93
Protein Sequence MKNCGPMTTLRSCSLGPSPSLLGFPRTLSTS
Nucleotide Sequence CTGAAGAACTGTGGGCCCATGACCACACTGAGGAGTTGTTCTTTAGGCCCCTCACCATCACTCTTGGGGTTCCCCAGGACCTTGAGCACCTCG

CircID chr12:56159691|56160053
ORF Type ORF8
Protein Length 37
Nucleotide Length 114
Protein Sequence MVLVLGHCLQHGQKVLKVQHLHIHLCHKGGGSVRPEK
Nucleotide Sequence CTGGTCCTTGTTCTTGGCCACTGTCTGCAGCATGGGCAGAAAGTGCTCAAAGTCCAGCACCTTCACATTCATCTCTGCCATAAAGGAGGTGGAAGTGTCAGGCCAGAGAAGTAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites