CircRNA Information

General Information
circRNA Basic Information
CircID chr12:56421014|56421401
Strand -
CircType exon
Host Gene ENSG00000111602.10;
Algorism CIRI2;
Sequence CCTGGACTTGTTCTGCTTCTGAGCCCCCTTCTTCTTCCTCTTCGCTGTCTTCCTCAGGCAGGTTTTCCTCTTCTTCCAGATCTTCCTGGCAAAAATCTTTCAGGGACTCCGCTCCATTTGGCTAAAATTCATTGGGGGTTGGGGGAATGAAAATGAAGGCAACACAAGGAACTTAGTGGAGTCTCCTCGTTCCTGACCACCGCACCCCCCCGCGCCTGCTCTCTCGGAAGGACCTGGTCAGAACAGCCTCAGGCAGGAAGAATCCAGGTGGACTGCTCCTAAGGACCACTTCAAGGGAAGTGAGCCCATGCCAGCAGAGCTAGGGTCAGATTGTTACCAAGATGGAGGATGCCAACTTTTTCTGCCGTTTCTTGTACAGCTCCCGCCG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:56421014|56421401 hsa-miR-204-5p 0 0 1
chr12:56421014|56421401 hsa-miR-204-3p 0 0 1
chr12:56421014|56421401 hsa-miR-205-5p 0 0 1
chr12:56421014|56421401 hsa-miR-205-3p 0 0 1
chr12:56421014|56421401 hsa-miR-211-5p 0 0 1
chr12:56421014|56421401 hsa-miR-211-3p 0 0 1
chr12:56421014|56421401 hsa-miR-504-5p 0 0 1
chr12:56421014|56421401 hsa-miR-504-3p 0 0 1
chr12:56421014|56421401 hsa-miR-573 0 0 1
chr12:56421014|56421401 hsa-miR-579-5p 0 0 1
chr12:56421014|56421401 hsa-miR-579-3p 0 0 1
chr12:56421014|56421401 hsa-miR-581 0 0 1
chr12:56421014|56421401 hsa-miR-619-5p 0 0 1
chr12:56421014|56421401 hsa-miR-619-3p 0 0 1
chr12:56421014|56421401 hsa-miR-623 0 1 1
chr12:56421014|56421401 hsa-miR-1298-5p 0 0 1
chr12:56421014|56421401 hsa-miR-1298-3p 0 0 1
chr12:56421014|56421401 hsa-miR-675-5p 0 0 1
chr12:56421014|56421401 hsa-miR-675-3p 0 0 1
chr12:56421014|56421401 hsa-miR-708-5p 0 0 1
chr12:56421014|56421401 hsa-miR-708-3p 0 0 1
chr12:56421014|56421401 hsa-miR-873-5p 0 0 1
chr12:56421014|56421401 hsa-miR-873-3p 0 0 1
chr12:56421014|56421401 hsa-miR-920 0 1 1
chr12:56421014|56421401 hsa-miR-1202 0 0 1
chr12:56421014|56421401 hsa-miR-1299 0 0 1
chr12:56421014|56421401 hsa-miR-129-5p 0 0 1
chr12:56421014|56421401 hsa-miR-485-5p 0 0 1
chr12:56421014|56421401 hsa-miR-1289 0 0 1
chr12:56421014|56421401 hsa-miR-361-3p 0 0 1
chr12:56421014|56421401 hsa-miR-28-5p 0 0 1
chr12:56421014|56421401 hsa-miR-502-5p 0 0 1
chr12:56421014|56421401 hsa-miR-875-3p 0 0 1
chr12:56421014|56421401 hsa-miR-342-5p 0 0 1
chr12:56421014|56421401 hsa-miR-125a-5p 0 0 1
chr12:56421014|56421401 hsa-miR-455-3p 0 0 1
chr12:56421014|56421401 hsa-miR-590-3p 0 0 1
chr12:56421014|56421401 hsa-miR-151-5p 0 0 1
chr12:56421014|56421401 hsa-miR-323-5p 0 0 1
chr12:56421014|56421401 hsa-miR-125b 0 0 1
chr12:56421014|56421401 hsa-miR-7 0 0 1
chr12:56421014|56421401 hsa-miR-24 0 0 1
chr12:56421014|56421401 hsa-miR-1201 0 0 1
chr12:56421014|56421401 hsa-miR-661 1 0 0
chr12:56421014|56421401 hsa-miR-298 1 1 0
chr12:56421014|56421401 hsa-miR-1469 1 0 0
chr12:56421014|56421401 hsa-miR-3125 1 1 0
chr12:56421014|56421401 hsa-miR-544b 0 1 0
chr12:56421014|56421401 hsa-miR-3138 1 0 0
chr12:56421014|56421401 hsa-miR-3154 1 1 0
chr12:56421014|56421401 hsa-miR-3170 1 0 0
chr12:56421014|56421401 hsa-miR-3185 1 1 0
chr12:56421014|56421401 hsa-miR-4300 0 1 0
chr12:56421014|56421401 hsa-miR-4271 1 1 0
chr12:56421014|56421401 hsa-miR-3665 1 1 0
chr12:56421014|56421401 hsa-miR-3916 1 1 0
chr12:56421014|56421401 hsa-miR-4421 1 1 0
chr12:56421014|56421401 hsa-miR-4436a 1 0 0
chr12:56421014|56421401 hsa-miR-4437 1 1 0
chr12:56421014|56421401 hsa-miR-4476 1 0 0
chr12:56421014|56421401 hsa-miR-4489 1 0 0
chr12:56421014|56421401 hsa-miR-2392 1 0 0
chr12:56421014|56421401 hsa-miR-4510 1 0 0
chr12:56421014|56421401 hsa-miR-4516 1 0 0
chr12:56421014|56421401 hsa-miR-4533 1 0 0
chr12:56421014|56421401 hsa-miR-4642 1 1 0
chr12:56421014|56421401 hsa-miR-4644 1 0 0
chr12:56421014|56421401 hsa-miR-4656 1 0 0
chr12:56421014|56421401 hsa-miR-4675 1 0 0
chr12:56421014|56421401 hsa-miR-4689 1 0 0
chr12:56421014|56421401 hsa-miR-4718 0 1 0
chr12:56421014|56421401 hsa-miR-4739 1 0 0
chr12:56421014|56421401 hsa-miR-4741 1 1 0
chr12:56421014|56421401 hsa-miR-4780 0 1 0
chr12:56421014|56421401 hsa-miR-5191 1 0 0
chr12:56421014|56421401 hsa-miR-5739 1 0 0
chr12:56421014|56421401 hsa-miR-5787 1 0 0
chr12:56421014|56421401 hsa-miR-6081 1 1 0
chr12:56421014|56421401 hsa-miR-6088 1 0 0
chr12:56421014|56421401 hsa-miR-6090 1 0 0
chr12:56421014|56421401 hsa-miR-6124 1 0 0
chr12:56421014|56421401 hsa-miR-6125 1 0 0
chr12:56421014|56421401 hsa-miR-6127 1 1 0
chr12:56421014|56421401 hsa-miR-6133 1 1 0
chr12:56421014|56421401 hsa-miR-8089 1 0 0
chr12:56421014|56421401 hsa-miR-9900 0 1 0
chr12:56421014|56421401 hsa-miR-12118 1 0 0
chr12:56421014|56421401 hsa-miR-12119 1 0 0
chr12:56421014|56421401 hsa-miR-12120 0 1 0
chr12:56421014|56421401 hsa-miR-203a-5p 0 1 0
chr12:56421014|56421401 hsa-miR-4433b-3p 1 0 0
chr12:56421014|56421401 hsa-miR-128-1-5p 1 0 0
chr12:56421014|56421401 hsa-miR-3194-3p 1 1 0
chr12:56421014|56421401 hsa-miR-323a-5p 1 1 0
chr12:56421014|56421401 hsa-miR-4433a-3p 1 0 0
chr12:56421014|56421401 hsa-miR-6765-5p 1 0 0
chr12:56421014|56421401 hsa-miR-6894-5p 1 0 0
chr12:56421014|56421401 hsa-miR-4687-3p 1 0 0
chr12:56421014|56421401 hsa-miR-6833-5p 1 0 0
chr12:56421014|56421401 hsa-miR-7847-3p 1 0 0
chr12:56421014|56421401 hsa-miR-4695-5p 1 0 0
chr12:56421014|56421401 hsa-miR-6744-5p 1 0 0
chr12:56421014|56421401 hsa-miR-6746-5p 1 1 0
chr12:56421014|56421401 hsa-miR-4709-3p 1 0 0
chr12:56421014|56421401 hsa-miR-4722-5p 1 0 0
chr12:56421014|56421401 hsa-miR-24-3p 1 1 0
chr12:56421014|56421401 hsa-miR-6875-3p 1 1 0
chr12:56421014|56421401 hsa-miR-432-5p 0 1 0
chr12:56421014|56421401 hsa-miR-3605-5p 1 0 0
chr12:56421014|56421401 hsa-miR-3180-3p 1 1 0
chr12:56421014|56421401 hsa-miR-6732-5p 1 0 0
chr12:56421014|56421401 hsa-miR-6805-5p 1 0 0
chr12:56421014|56421401 hsa-miR-3126-5p 1 0 0
chr12:56421014|56421401 hsa-miR-6760-5p 1 1 0
chr12:56421014|56421401 hsa-miR-2467-3p 1 0 0
chr12:56421014|56421401 hsa-miR-6782-5p 1 0 0
chr12:56421014|56421401 hsa-miR-6514-5p 0 1 0
chr12:56421014|56421401 hsa-miR-3156-5p 1 1 0
chr12:56421014|56421401 hsa-miR-3150b-3p 0 1 0
chr12:56421014|56421401 hsa-miR-5006-5p 0 1 0
chr12:56421014|56421401 hsa-miR-345-3p 1 0 0
chr12:56421014|56421401 hsa-miR-5088-5p 1 0 0
chr12:56421014|56421401 hsa-miR-1226-5p 1 0 0
chr12:56421014|56421401 hsa-miR-4640-5p 1 0 0
chr12:56421014|56421401 hsa-miR-5010-3p 1 0 0
chr12:56421014|56421401 hsa-miR-5001-3p 1 0 0
chr12:56421014|56421401 hsa-miR-885-3p 1 0 0
chr12:56421014|56421401 hsa-miR-4690-5p 0 1 0
chr12:56421014|56421401 hsa-miR-6501-5p 1 0 0
chr12:56421014|56421401 hsa-miR-550b-2-5p 1 0 0
chr12:56421014|56421401 hsa-miR-6878-5p 1 0 0
chr12:56421014|56421401 hsa-miR-7162-3p 1 0 0
chr12:56421014|56421401 hsa-miR-7846-3p 1 1 0
chr12:56421014|56421401 hsa-miR-6793-3p 1 1 0
chr12:56421014|56421401 hsa-miR-2277-5p 0 1 0
chr12:56421014|56421401 hsa-miR-4283 1 1 0
chr12:56421014|56421401 hsa-miR-335-3p 0 1 0
chr12:56421014|56421401 hsa-miR-4423-5p 0 1 0
chr12:56421014|56421401 hsa-miR-1207-5p 1 0 0
chr12:56421014|56421401 hsa-miR-4763-3p 1 0 0
chr12:56421014|56421401 hsa-miR-6778-5p 1 0 0
chr12:56421014|56421401 hsa-miR-6787-5p 1 0 0
chr12:56421014|56421401 hsa-miR-6812-5p 0 1 0
chr12:56421014|56421401 hsa-miR-6816-5p 1 0 0
chr12:56421014|56421401 hsa-miR-1343-5p 1 0 0
chr12:56421014|56421401 hsa-miR-3180 1 0 0
chr12:56421014|56421401 hsa-miR-6743-5p 1 0 0
chr12:56421014|56421401 hsa-miR-6752-5p 1 1 0
chr12:56421014|56421401 hsa-miR-6754-5p 1 0 0
chr12:56421014|56421401 hsa-miR-6813-5p 1 0 0
chr12:56421014|56421401 hsa-miR-6851-5p 1 0 0
chr12:56421014|56421401 hsa-miR-7110-5p 0 1 0
chr12:56421014|56421401 hsa-miR-1249-5p 1 0 0
chr12:56421014|56421401 hsa-miR-6788-5p 1 0 0
chr12:56421014|56421401 hsa-miR-6808-5p 1 0 0
chr12:56421014|56421401 hsa-miR-5196-5p 1 0 0
chr12:56421014|56421401 hsa-miR-6780b-5p 1 0 0
chr12:56421014|56421401 hsa-miR-10396a-5p 1 0 0
chr12:56421014|56421401 hsa-miR-10526-3p 1 0 0
chr12:56421014|56421401 hsa-miR-1237-5p 1 0 0
chr12:56421014|56421401 hsa-miR-328-5p 1 0 0
chr12:56421014|56421401 hsa-miR-4632-5p 1 1 0
chr12:56421014|56421401 hsa-miR-4725-3p 1 0 0
chr12:56421014|56421401 hsa-miR-4745-5p 1 0 0
chr12:56421014|56421401 hsa-miR-6794-5p 1 0 0
chr12:56421014|56421401 hsa-miR-6846-5p 1 1 0
chr12:56421014|56421401 hsa-miR-6848-5p 1 1 0
chr12:56421014|56421401 hsa-miR-6858-5p 1 0 0
chr12:56421014|56421401 hsa-miR-6831-5p 0 1 0
chr12:56421014|56421401 hsa-miR-6885-5p 1 0 0
chr12:56421014|56421401 hsa-miR-939-5p 1 0 0
chr12:56421014|56421401 hsa-miR-6511a-5p 1 0 0
chr12:56421014|56421401 hsa-miR-6731-5p 1 0 0
chr12:56421014|56421401 hsa-miR-6856-5p 1 0 0
chr12:56421014|56421401 hsa-miR-4700-5p 1 0 0
chr12:56421014|56421401 hsa-miR-3173-3p 1 0 0
chr12:56421014|56421401 hsa-miR-3679-5p 1 0 0
chr12:56421014|56421401 hsa-miR-6876-5p 1 1 0
chr12:56421014|56421401 hsa-miR-6891-5p 1 0 0
chr12:56421014|56421401 hsa-miR-4667-5p 1 0 0
chr12:56421014|56421401 hsa-miR-3184-5p 1 0 0
chr12:56421014|56421401 hsa-miR-6791-5p 1 0 0
chr12:56421014|56421401 hsa-miR-550a-3-5p 1 1 0
chr12:56421014|56421401 hsa-miR-550a-5p 1 1 0
chr12:56421014|56421401 hsa-miR-11181-5p 0 1 0
chr12:56421014|56421401 hsa-miR-6859-5p 1 1 0
chr12:56421014|56421401 hsa-miR-9983-3p 0 1 0
chr12:56421014|56421401 hsa-miR-4799-3p 0 1 0
chr12:56421014|56421401 hsa-miR-203b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr12:56421014|56421401
ORF Type ORF1
Protein Length 45
Nucleotide Length 138
Protein Sequence MLLSPLLLPLRCLPQAGFPLLPDLPGKNLSGTPLHLAKIHWGLGE
Nucleotide Sequence CTGCTTCTGAGCCCCCTTCTTCTTCCTCTTCGCTGTCTTCCTCAGGCAGGTTTTCCTCTTCTTCCAGATCTTCCTGGCAAAAATCTTTCAGGGACTCCGCTCCATTTGGCTAAAATTCATTGGGGGTTGGGGGAATGA

CircID chr12:56421014|56421401
ORF Type ORF2
Protein Length 29
Nucleotide Length 90
Protein Sequence MTTAPPRACSLGRTWSEQPQAGRIQVDCS
Nucleotide Sequence CTGACCACCGCACCCCCCCGCGCCTGCTCTCTCGGAAGGACCTGGTCAGAACAGCCTCAGGCAGGAAGAATCCAGGTGGACTGCTCCTAA

CircID chr12:56421014|56421401
ORF Type ORF3
Protein Length 36
Nucleotide Length 111
Protein Sequence MAKIFQGLRSIWLKFIGGWGNENEGNTRNLVESPRS
Nucleotide Sequence CTGGCAAAAATCTTTCAGGGACTCCGCTCCATTTGGCTAAAATTCATTGGGGGTTGGGGGAATGAAAATGAAGGCAACACAAGGAACTTAGTGGAGTCTCCTCGTTCCTGA

CircID chr12:56421014|56421401
ORF Type ORF4
Protein Length 27
Nucleotide Length 81
Protein Sequence MPAELGSDCYQDGGCQLFLPFLVQLPP
Nucleotide Sequence ATGCCAGCAGAGCTAGGGTCAGATTGTTACCAAGATGGAGGATGCCAACTTTTTCTGCCGTTTCTTGTACAGCTCCCGCCG

CircID chr12:56421014|56421401
ORF Type ORF5
Protein Length 26
Nucleotide Length 81
Protein Sequence MSSSGRFSSSSRSSWQKSFRDSAPFG
Nucleotide Sequence CTGTCTTCCTCAGGCAGGTTTTCCTCTTCTTCCAGATCTTCCTGGCAAAAATCTTTCAGGGACTCCGCTCCATTTGGCTAA

CircID chr12:56421014|56421401
ORF Type ORF6
Protein Length 35
Nucleotide Length 108
Protein Sequence MLSRKDLVRTASGRKNPGGLLLRTTSREVSPCQQS
Nucleotide Sequence CTGCTCTCTCGGAAGGACCTGGTCAGAACAGCCTCAGGCAGGAAGAATCCAGGTGGACTGCTCCTAAGGACCACTTCAAGGGAAGTGAGCCCATGCCAGCAGAGCTAG

CircID chr12:56421014|56421401
ORF Type ORF7
Protein Length 27
Nucleotide Length 84
Protein Sequence MPEAVLTRSFRESRRGGVRWSGTRRLH
Nucleotide Sequence CTGCCTGAGGCTGTTCTGACCAGGTCCTTCCGAGAGAGCAGGCGCGGGGGGGTGCGGTGGTCAGGAACGAGGAGACTCCACTAA

CircID chr12:56421014|56421401
ORF Type ORF8
Protein Length 34
Nucleotide Length 102
Protein Sequence MKDFCQEDLEEEENLPEEDSEEEEEGGSEAEQVQ
Nucleotide Sequence CTGAAAGATTTTTGCCAGGAAGATCTGGAAGAAGAGGAAAACCTGCCTGAGGAAGACAGCGAAGAGGAAGAAGAAGGGGGCTCAGAAGCAGAACAAGTCCAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites