CircRNA Information

General Information
circRNA Basic Information
CircID chr12:56600434|56600746
Strand +
CircType exon
Host Gene ENSG00000076108.10;
Algorism CIRI2;
Sequence CTAGCAGTGCTTCAATGGGTAGAGGAGCTGGAGCAGCGGGTTATCATGTCTGATCTGCAGATTCGGGTATGCTGGGATTGGCACTGTGTAGGAAGGTTGGGGAAAAGCATTAGTCCCTTATGCCCTGTTAGAAAAAACCCTGGGTCCCTACTTCACAGGTGACCTACCTTAAGTGGGTCTTGTTTTTGTTTTTTTTTTTCCTATGCCAAATTTTCCTCCTTTTACAGTGAGTTTTATTCCTCTCTCTTAACTGAAGGGCTGGACATGTCCTAGCCCAGACTCTACCCGTGAAGACTTGGCCTACTGTGAGCAC
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:56600434|56600746 hsa-miR-27a-5p 0 0 1
chr12:56600434|56600746 hsa-miR-27a-3p 0 0 1
chr12:56600434|56600746 hsa-miR-96-5p 0 0 1
chr12:56600434|56600746 hsa-miR-96-3p 0 0 1
chr12:56600434|56600746 hsa-miR-198 0 0 1
chr12:56600434|56600746 hsa-miR-182-5p 0 0 1
chr12:56600434|56600746 hsa-miR-182-3p 0 0 1
chr12:56600434|56600746 hsa-miR-27b-5p 0 0 1
chr12:56600434|56600746 hsa-miR-27b-3p 0 0 1
chr12:56600434|56600746 hsa-miR-155-5p 0 0 1
chr12:56600434|56600746 hsa-miR-155-3p 0 0 1
chr12:56600434|56600746 hsa-miR-383-5p 0 0 1
chr12:56600434|56600746 hsa-miR-383-3p 0 0 1
chr12:56600434|56600746 hsa-miR-412-5p 0 0 1
chr12:56600434|56600746 hsa-miR-412-3p 0 0 1
chr12:56600434|56600746 hsa-miR-612 0 0 1
chr12:56600434|56600746 hsa-miR-660-5p 0 0 1
chr12:56600434|56600746 hsa-miR-660-3p 0 0 1
chr12:56600434|56600746 hsa-miR-1264 0 0 1
chr12:56600434|56600746 hsa-miR-1271-5p 0 0 1
chr12:56600434|56600746 hsa-miR-1271-3p 0 0 1
chr12:56600434|56600746 hsa-miR-766-5p 0 0 1
chr12:56600434|56600746 hsa-miR-766-3p 0 0 1
chr12:56600434|56600746 hsa-miR-935 0 0 1
chr12:56600434|56600746 hsa-miR-1178-5p 0 0 1
chr12:56600434|56600746 hsa-miR-1178-3p 0 0 1
chr12:56600434|56600746 hsa-miR-1205 0 0 1
chr12:56600434|56600746 hsa-miR-1208 0 0 1
chr12:56600434|56600746 hsa-miR-548e-5p 0 0 1
chr12:56600434|56600746 hsa-miR-548e-3p 0 0 1
chr12:56600434|56600746 hsa-miR-1197 0 0 1
chr12:56600434|56600746 hsa-miR-1324 0 0 1
chr12:56600434|56600746 hsa-miR-127-5p 0 0 1
chr12:56600434|56600746 hsa-miR-1184 0 0 1
chr12:56600434|56600746 hsa-miR-576-5p 0 0 1
chr12:56600434|56600746 hsa-miR-338-3p 0 1 1
chr12:56600434|56600746 hsa-miR-548a-3p 0 0 1
chr12:56600434|56600746 hsa-miR-128 0 0 1
chr12:56600434|56600746 hsa-miR-548f 0 0 1
chr12:56600434|56600746 hsa-miR-1285 0 0 1
chr12:56600434|56600746 hsa-miR-129-3p 0 0 1
chr12:56600434|56600746 hsa-miR-765 1 0 0
chr12:56600434|56600746 hsa-miR-1182 0 1 0
chr12:56600434|56600746 hsa-miR-1183 1 0 0
chr12:56600434|56600746 hsa-miR-711 1 1 0
chr12:56600434|56600746 hsa-miR-3132 0 1 0
chr12:56600434|56600746 hsa-miR-4268 0 1 0
chr12:56600434|56600746 hsa-miR-3945 1 1 0
chr12:56600434|56600746 hsa-miR-378g 0 1 0
chr12:56600434|56600746 hsa-miR-4689 1 0 0
chr12:56600434|56600746 hsa-miR-4739 1 0 0
chr12:56600434|56600746 hsa-miR-6069 0 1 0
chr12:56600434|56600746 hsa-miR-6132 1 0 0
chr12:56600434|56600746 hsa-miR-8089 1 0 0
chr12:56600434|56600746 hsa-miR-9985 0 1 0
chr12:56600434|56600746 hsa-miR-12118 1 0 0
chr12:56600434|56600746 hsa-miR-141-5p 0 1 0
chr12:56600434|56600746 hsa-miR-128-3p 0 1 0
chr12:56600434|56600746 hsa-miR-7106-5p 1 0 0
chr12:56600434|56600746 hsa-miR-6894-5p 1 0 0
chr12:56600434|56600746 hsa-miR-6720-5p 0 1 0
chr12:56600434|56600746 hsa-miR-192-3p 0 1 0
chr12:56600434|56600746 hsa-miR-150-5p 1 0 0
chr12:56600434|56600746 hsa-miR-6728-5p 1 0 0
chr12:56600434|56600746 hsa-miR-7114-5p 1 1 0
chr12:56600434|56600746 hsa-miR-7847-3p 1 0 0
chr12:56600434|56600746 hsa-miR-4695-5p 1 0 0
chr12:56600434|56600746 hsa-miR-6730-5p 1 0 0
chr12:56600434|56600746 hsa-miR-7154-3p 1 0 0
chr12:56600434|56600746 hsa-miR-3622b-5p 1 0 0
chr12:56600434|56600746 hsa-miR-6806-5p 1 0 0
chr12:56600434|56600746 hsa-miR-197-5p 1 1 0
chr12:56600434|56600746 hsa-miR-6827-5p 1 0 0
chr12:56600434|56600746 hsa-miR-6798-5p 1 0 0
chr12:56600434|56600746 hsa-miR-3667-5p 0 1 0
chr12:56600434|56600746 hsa-miR-6882-3p 1 0 0
chr12:56600434|56600746 hsa-miR-6772-3p 1 0 0
chr12:56600434|56600746 hsa-miR-6740-5p 1 0 0
chr12:56600434|56600746 hsa-miR-1229-5p 1 1 0
chr12:56600434|56600746 hsa-miR-877-5p 1 0 0
chr12:56600434|56600746 hsa-miR-4446-5p 1 0 0
chr12:56600434|56600746 hsa-miR-149-3p 1 0 0
chr12:56600434|56600746 hsa-miR-6736-3p 1 1 0
chr12:56600434|56600746 hsa-miR-629-3p 1 0 0
chr12:56600434|56600746 hsa-miR-6793-3p 1 1 0
chr12:56600434|56600746 hsa-miR-1288-5p 0 1 0
chr12:56600434|56600746 hsa-miR-1295b-3p 1 0 0
chr12:56600434|56600746 hsa-miR-625-5p 1 0 0
chr12:56600434|56600746 hsa-miR-6731-3p 1 0 0
chr12:56600434|56600746 hsa-miR-5007-5p 0 1 0
chr12:56600434|56600746 hsa-miR-6775-5p 1 1 0
chr12:56600434|56600746 hsa-miR-6754-5p 1 0 0
chr12:56600434|56600746 hsa-miR-11181-3p 1 0 0
chr12:56600434|56600746 hsa-miR-1249-5p 1 0 0
chr12:56600434|56600746 hsa-miR-6797-5p 1 0 0
chr12:56600434|56600746 hsa-miR-6875-5p 1 0 0
chr12:56600434|56600746 hsa-miR-6836-5p 1 0 0
chr12:56600434|56600746 hsa-miR-10526-3p 1 0 0
chr12:56600434|56600746 hsa-miR-4685-5p 1 0 0
chr12:56600434|56600746 hsa-miR-4749-5p 1 0 0
chr12:56600434|56600746 hsa-miR-6858-5p 1 0 0
chr12:56600434|56600746 hsa-miR-1266-5p 1 0 0
chr12:56600434|56600746 hsa-miR-6758-5p 0 1 0
chr12:56600434|56600746 hsa-miR-6856-5p 0 1 0
chr12:56600434|56600746 hsa-miR-6773-5p 1 0 0
chr12:56600434|56600746 hsa-miR-324-3p 1 0 0
chr12:56600434|56600746 hsa-miR-3173-3p 1 1 0
chr12:56600434|56600746 hsa-miR-4646-5p 1 0 0
chr12:56600434|56600746 hsa-miR-6891-5p 1 1 0
chr12:56600434|56600746 hsa-miR-4716-3p 1 0 0
chr12:56600434|56600746 hsa-miR-6801-3p 1 0 0
chr12:56600434|56600746 hsa-miR-6512-3p 0 1 0
chr12:56600434|56600746 hsa-miR-6859-5p 0 1 0
chr12:56600434|56600746 hsa-miR-6764-5p 0 1 0
chr12:56600434|56600746 hsa-miR-3681-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr12:56600434|56600746
ORF Type ORF1
Protein Length 44
Nucleotide Length 135
Protein Sequence MEQRVIMSDLQIRVCWDWHCVGRLGKSISPLCPVRKNPGSLLHR
Nucleotide Sequence CTGGAGCAGCGGGTTATCATGTCTGATCTGCAGATTCGGGTATGCTGGGATTGGCACTGTGTAGGAAGGTTGGGGAAAAGCATTAGTCCCTTATGCCCTGTTAGAAAAAACCCTGGGTCCCTACTTCACAGGTGA
CircID chr12:56600434|56600746
ORF Type ORF2
Protein Length 32
Nucleotide Length 99
Protein Sequence MLFPNLPTQCQSQHTRICRSDMITRCSSSSTH
Nucleotide Sequence ATGCTTTTCCCCAACCTTCCTACACAGTGCCAATCCCAGCATACCCGAATCTGCAGATCAGACATGATAACCCGCTGCTCCAGCTCCTCTACCCATTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab