CircNet

General Information

circRNA Basic Information

CircID	chr12:57602055\|57602209
Strand	-
CircType	exon
Host Gene	ENSG00000166908.16;
Algorism	CIRI2;
Sequence	TTTATAAAACTCACTATGGCATGCTTCCCTCCTGGTGGGCCCTAGGATGGATGACACTCAAGATACTACAGATGTGGGTGCAGGCATGCACACACACGATGGAATATGGCCATTCCTACACAGGTGGGGTAGAGAGTGGGTCAGCAGCCTGGCAC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr12:57602055\|57602209	hsa-miR-340-5p	0	0	1
chr12:57602055\|57602209	hsa-miR-340-3p	0	0	1
chr12:57602055\|57602209	hsa-miR-526b-5p	0	0	1
chr12:57602055\|57602209	hsa-miR-526b-3p	0	0	1
chr12:57602055\|57602209	hsa-miR-1296-5p	0	0	1
chr12:57602055\|57602209	hsa-miR-1296-3p	0	0	1
chr12:57602055\|57602209	hsa-miR-665	0	1	1
chr12:57602055\|57602209	hsa-miR-921	0	0	1
chr12:57602055\|57602209	hsa-miR-574-5p	0	0	1
chr12:57602055\|57602209	hsa-miR-1224-3p	0	0	1
chr12:57602055\|57602209	hsa-miR-628-5p	0	0	1
chr12:57602055\|57602209	hsa-miR-647	0	1	0
chr12:57602055\|57602209	hsa-miR-3137	1	0	0
chr12:57602055\|57602209	hsa-miR-3659	1	1	0
chr12:57602055\|57602209	hsa-miR-4658	0	1	0
chr12:57602055\|57602209	hsa-miR-4779	0	1	0
chr12:57602055\|57602209	hsa-miR-93-3p	0	1	0
chr12:57602055\|57602209	hsa-miR-15a-3p	1	0	0
chr12:57602055\|57602209	hsa-miR-4755-3p	0	1	0
chr12:57602055\|57602209	hsa-miR-6762-3p	0	1	0
chr12:57602055\|57602209	hsa-miR-4728-3p	1	1	0
chr12:57602055\|57602209	hsa-miR-3130-3p	0	1	0
chr12:57602055\|57602209	hsa-miR-1343-3p	1	1	0
chr12:57602055\|57602209	hsa-miR-6825-3p	1	1	0
chr12:57602055\|57602209	hsa-miR-6777-3p	0	1	0
chr12:57602055\|57602209	hsa-miR-6794-3p	0	1	0
chr12:57602055\|57602209	hsa-miR-20b-3p	1	0	0
chr12:57602055\|57602209	hsa-miR-4750-3p	0	1	0
chr12:57602055\|57602209	hsa-miR-4639-3p	0	1	0
chr12:57602055\|57602209	hsa-miR-1343-5p	1	0	0
chr12:57602055\|57602209	hsa-miR-1249-5p	0	1	0
chr12:57602055\|57602209	hsa-miR-6797-5p	0	1	0
chr12:57602055\|57602209	hsa-miR-3085-5p	1	0	0
chr12:57602055\|57602209	hsa-miR-6791-5p	1	0	0
chr12:57602055\|57602209	hsa-miR-6769b-3p	0	1	0
chr12:57602055\|57602209	hsa-miR-7114-3p	1	1	0
chr12:57602055\|57602209	hsa-miR-4684-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr12:57602055\|57602209
ORF Type	ORF1
Protein Length	41
Nucleotide Length	123
Protein Sequence	MVGPRMDDTQDTTDVGAGMHTHDGIWPFLHRWGREWVSSLA
Nucleotide Sequence	CTGGTGGGCCCTAGGATGGATGACACTCAAGATACTACAGATGTGGGTGCAGGCATGCACACACACGATGGAATATGGCCATTCCTACACAGGTGGGGTAGAGAGTGGGTCAGCAGCCTGGCA

CircID	chr12:57602055\|57602209
ORF Type	ORF2
Protein Length	45
Nucleotide Length	135
Protein Sequence	MLPSWWALGWMTLKILQMWVQACTHTMEYGHSYTGGVESGSAAWH
Nucleotide Sequence	ATGCTTCCCTCCTGGTGGGCCCTAGGATGGATGACACTCAAGATACTACAGATGTGGGTGCAGGCATGCACACACACGATGGAATATGGCCATTCCTACACAGGTGGGGTAGAGAGTGGGTCAGCAGCCTGGCAC

CircID	chr12:57602055\|57602209
ORF Type	ORF3
Protein Length	29
Nucleotide Length	90
Protein Sequence	MLTHSLPHLCRNGHIPSCVCMPAPTSVVS
Nucleotide Sequence	CTGCTGACCCACTCTCTACCCCACCTGTGTAGGAATGGCCATATTCCATCGTGTGTGTGCATGCCTGCACCCACATCTGTAGTATCTTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information