CircRNA Information

General Information
circRNA Basic Information
CircID chr12:57715940|57716171
Strand +
CircType exon
Host Gene ENSG00000135506.14;
Algorism CIRI2;
Sequence CCCAGACTTGGTCTCACTCCACACTTGGGGGCCTAGATCTTGCAGCTCCTCTATGATTTTATCTCCATACTGCTTTGAGTCTACTGAGAAACAGCATGCAAGCAGGCCAGGAACACATTCCTCCAGCTATTCAATACTTGATCTTTTGCCACCCCCTGCCCCCGTATCTCCCCGTCTTCTCCTCCTTCTCTAATTACTCACCGGCTTGCCTCTGAACGTAGGCCATGTACTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:57715940|57716171 hsa-miR-26b-5p 0 0 1
chr12:57715940|57716171 hsa-miR-26b-3p 0 0 1
chr12:57715940|57716171 hsa-miR-122-5p 0 0 1
chr12:57715940|57716171 hsa-miR-122-3p 0 0 1
chr12:57715940|57716171 hsa-miR-206 0 0 1
chr12:57715940|57716171 hsa-miR-376b-5p 0 0 1
chr12:57715940|57716171 hsa-miR-376b-3p 0 0 1
chr12:57715940|57716171 hsa-miR-558 0 0 1
chr12:57715940|57716171 hsa-miR-577 0 0 1
chr12:57715940|57716171 hsa-miR-595 0 0 1
chr12:57715940|57716171 hsa-miR-608 1 0 1
chr12:57715940|57716171 hsa-miR-613 0 0 1
chr12:57715940|57716171 hsa-miR-620 0 0 1
chr12:57715940|57716171 hsa-miR-645 0 0 1
chr12:57715940|57716171 hsa-miR-411-5p 0 0 1
chr12:57715940|57716171 hsa-miR-411-3p 0 0 1
chr12:57715940|57716171 hsa-miR-765 1 0 1
chr12:57715940|57716171 hsa-miR-888-5p 0 0 1
chr12:57715940|57716171 hsa-miR-888-3p 0 0 1
chr12:57715940|57716171 hsa-miR-708-5p 0 0 1
chr12:57715940|57716171 hsa-miR-708-3p 0 0 1
chr12:57715940|57716171 hsa-miR-877-5p 0 0 1
chr12:57715940|57716171 hsa-miR-877-3p 0 0 1
chr12:57715940|57716171 hsa-miR-936 0 0 1
chr12:57715940|57716171 hsa-miR-1297 0 0 1
chr12:57715940|57716171 hsa-miR-1303 1 0 1
chr12:57715940|57716171 hsa-miR-1253 0 0 1
chr12:57715940|57716171 hsa-miR-1270 1 0 1
chr12:57715940|57716171 hsa-miR-769-5p 0 0 1
chr12:57715940|57716171 hsa-miR-486-3p 0 0 1
chr12:57715940|57716171 hsa-miR-330-3p 0 0 1
chr12:57715940|57716171 hsa-miR-483-5p 1 0 1
chr12:57715940|57716171 hsa-miR-28-5p 0 0 1
chr12:57715940|57716171 hsa-miR-199b-3p 0 0 1
chr12:57715940|57716171 hsa-miR-199a-3p 0 0 1
chr12:57715940|57716171 hsa-miR-1207-5p 1 0 1
chr12:57715940|57716171 hsa-miR-26a 0 0 1
chr12:57715940|57716171 hsa-miR-1 0 0 1
chr12:57715940|57716171 hsa-miR-376a 0 0 1
chr12:57715940|57716171 hsa-miR-637 1 0 0
chr12:57715940|57716171 hsa-miR-663a 1 0 0
chr12:57715940|57716171 hsa-miR-762 1 0 0
chr12:57715940|57716171 hsa-miR-1293 1 0 0
chr12:57715940|57716171 hsa-miR-1268a 1 0 0
chr12:57715940|57716171 hsa-miR-1275 1 0 0
chr12:57715940|57716171 hsa-miR-1471 1 0 0
chr12:57715940|57716171 hsa-miR-3125 1 0 0
chr12:57715940|57716171 hsa-miR-3141 1 0 0
chr12:57715940|57716171 hsa-miR-3154 1 0 0
chr12:57715940|57716171 hsa-miR-3175 1 0 0
chr12:57715940|57716171 hsa-miR-3185 1 0 0
chr12:57715940|57716171 hsa-miR-3196 1 0 0
chr12:57715940|57716171 hsa-miR-4327 0 1 0
chr12:57715940|57716171 hsa-miR-4271 1 0 0
chr12:57715940|57716171 hsa-miR-3911 1 0 0
chr12:57715940|57716171 hsa-miR-1268b 1 0 0
chr12:57715940|57716171 hsa-miR-4428 1 0 0
chr12:57715940|57716171 hsa-miR-4441 1 0 0
chr12:57715940|57716171 hsa-miR-3135b 0 1 0
chr12:57715940|57716171 hsa-miR-4463 1 0 0
chr12:57715940|57716171 hsa-miR-4476 1 0 0
chr12:57715940|57716171 hsa-miR-4488 1 0 0
chr12:57715940|57716171 hsa-miR-4498 1 0 0
chr12:57715940|57716171 hsa-miR-4510 1 0 0
chr12:57715940|57716171 hsa-miR-4516 1 0 0
chr12:57715940|57716171 hsa-miR-4525 1 0 0
chr12:57715940|57716171 hsa-miR-4531 1 0 0
chr12:57715940|57716171 hsa-miR-4533 1 0 0
chr12:57715940|57716171 hsa-miR-4534 1 0 0
chr12:57715940|57716171 hsa-miR-3960 1 0 0
chr12:57715940|57716171 hsa-miR-4651 1 0 0
chr12:57715940|57716171 hsa-miR-4688 1 0 0
chr12:57715940|57716171 hsa-miR-4689 1 0 0
chr12:57715940|57716171 hsa-miR-4706 1 0 0
chr12:57715940|57716171 hsa-miR-4739 1 0 0
chr12:57715940|57716171 hsa-miR-4784 1 0 0
chr12:57715940|57716171 hsa-miR-5090 1 0 0
chr12:57715940|57716171 hsa-miR-5698 1 0 0
chr12:57715940|57716171 hsa-miR-5703 1 0 0
chr12:57715940|57716171 hsa-miR-5739 1 0 0
chr12:57715940|57716171 hsa-miR-5787 1 0 0
chr12:57715940|57716171 hsa-miR-6124 1 0 0
chr12:57715940|57716171 hsa-miR-6127 1 0 0
chr12:57715940|57716171 hsa-miR-6132 1 0 0
chr12:57715940|57716171 hsa-miR-6133 1 0 0
chr12:57715940|57716171 hsa-miR-6165 1 0 0
chr12:57715940|57716171 hsa-miR-6745 1 0 0
chr12:57715940|57716171 hsa-miR-7150 1 0 0
chr12:57715940|57716171 hsa-miR-7515 1 0 0
chr12:57715940|57716171 hsa-miR-8072 1 0 0
chr12:57715940|57716171 hsa-miR-8085 1 0 0
chr12:57715940|57716171 hsa-miR-12118 1 0 0
chr12:57715940|57716171 hsa-miR-222-5p 0 1 0
chr12:57715940|57716171 hsa-miR-4433b-3p 1 0 0
chr12:57715940|57716171 hsa-miR-6734-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6747-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6809-5p 1 0 0
chr12:57715940|57716171 hsa-miR-3150a-3p 1 0 0
chr12:57715940|57716171 hsa-miR-7106-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6825-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6894-5p 1 0 0
chr12:57715940|57716171 hsa-miR-25-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6799-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6510-5p 1 0 0
chr12:57715940|57716171 hsa-miR-766-5p 1 0 0
chr12:57715940|57716171 hsa-miR-3622a-5p 1 0 0
chr12:57715940|57716171 hsa-miR-1227-5p 1 0 0
chr12:57715940|57716171 hsa-miR-4786-5p 0 1 0
chr12:57715940|57716171 hsa-miR-6089 1 0 0
chr12:57715940|57716171 hsa-miR-6757-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6873-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6880-5p 1 0 0
chr12:57715940|57716171 hsa-miR-7847-3p 1 0 0
chr12:57715940|57716171 hsa-miR-4695-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6746-5p 1 0 0
chr12:57715940|57716171 hsa-miR-7154-3p 1 0 0
chr12:57715940|57716171 hsa-miR-6727-5p 1 0 0
chr12:57715940|57716171 hsa-miR-3622b-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6721-5p 1 0 0
chr12:57715940|57716171 hsa-miR-197-5p 1 0 0
chr12:57715940|57716171 hsa-miR-3663-5p 0 1 0
chr12:57715940|57716171 hsa-miR-6742-5p 1 0 0
chr12:57715940|57716171 hsa-miR-3180-3p 1 0 0
chr12:57715940|57716171 hsa-miR-6748-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6772-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6732-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6805-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6798-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6760-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6881-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6782-5p 1 0 0
chr12:57715940|57716171 hsa-miR-3156-5p 0 1 0
chr12:57715940|57716171 hsa-miR-3150b-3p 1 0 0
chr12:57715940|57716171 hsa-miR-6821-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6810-5p 1 0 0
chr12:57715940|57716171 hsa-miR-3691-3p 0 1 0
chr12:57715940|57716171 hsa-miR-6786-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6835-5p 1 0 0
chr12:57715940|57716171 hsa-miR-1229-5p 1 0 0
chr12:57715940|57716171 hsa-miR-4640-5p 1 0 0
chr12:57715940|57716171 hsa-miR-30c-2-3p 1 0 0
chr12:57715940|57716171 hsa-miR-885-3p 1 0 0
chr12:57715940|57716171 hsa-miR-1908-5p 1 0 0
chr12:57715940|57716171 hsa-miR-1228-5p 1 0 0
chr12:57715940|57716171 hsa-miR-485-5p 1 0 0
chr12:57715940|57716171 hsa-miR-5585-3p 0 1 0
chr12:57715940|57716171 hsa-miR-4787-5p 1 0 0
chr12:57715940|57716171 hsa-miR-149-3p 1 0 0
chr12:57715940|57716171 hsa-miR-2276-3p 0 1 0
chr12:57715940|57716171 hsa-miR-5010-5p 1 0 0
chr12:57715940|57716171 hsa-miR-7112-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6869-5p 1 0 0
chr12:57715940|57716171 hsa-miR-423-5p 1 0 0
chr12:57715940|57716171 hsa-miR-361-3p 0 1 0
chr12:57715940|57716171 hsa-miR-942-3p 0 1 0
chr12:57715940|57716171 hsa-miR-10400-5p 1 0 0
chr12:57715940|57716171 hsa-miR-1233-5p 1 0 0
chr12:57715940|57716171 hsa-miR-1273h-5p 1 0 0
chr12:57715940|57716171 hsa-miR-4763-3p 1 0 0
chr12:57715940|57716171 hsa-miR-6769b-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6778-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6787-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6812-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6816-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6865-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6870-5p 1 0 0
chr12:57715940|57716171 hsa-miR-1343-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6737-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6743-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6752-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6754-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6756-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6769a-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6803-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6819-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6842-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6851-5p 1 0 0
chr12:57715940|57716171 hsa-miR-7110-5p 1 0 0
chr12:57715940|57716171 hsa-miR-11181-3p 1 0 0
chr12:57715940|57716171 hsa-miR-6722-3p 1 0 0
chr12:57715940|57716171 hsa-miR-6751-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6763-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6788-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6797-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6808-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6879-5p 1 0 0
chr12:57715940|57716171 hsa-miR-7111-5p 1 0 0
chr12:57715940|57716171 hsa-miR-4728-5p 1 0 0
chr12:57715940|57716171 hsa-miR-5196-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6780b-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6836-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6862-5p 1 0 0
chr12:57715940|57716171 hsa-miR-10396b-5p 1 0 0
chr12:57715940|57716171 hsa-miR-10526-3p 1 0 0
chr12:57715940|57716171 hsa-miR-1237-5p 1 0 0
chr12:57715940|57716171 hsa-miR-1909-3p 1 0 0
chr12:57715940|57716171 hsa-miR-328-5p 1 0 0
chr12:57715940|57716171 hsa-miR-4649-5p 1 0 0
chr12:57715940|57716171 hsa-miR-4725-3p 1 0 0
chr12:57715940|57716171 hsa-miR-4749-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6729-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6738-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6777-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6794-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6795-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6846-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6848-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6858-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6887-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6889-5p 1 0 0
chr12:57715940|57716171 hsa-miR-4436b-3p 1 0 0
chr12:57715940|57716171 hsa-miR-4723-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6831-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6885-5p 1 0 0
chr12:57715940|57716171 hsa-miR-939-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6511a-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6731-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6758-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6856-5p 1 0 0
chr12:57715940|57716171 hsa-miR-3173-3p 1 0 0
chr12:57715940|57716171 hsa-miR-4747-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6876-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6891-5p 1 0 0
chr12:57715940|57716171 hsa-miR-4716-3p 1 0 0
chr12:57715940|57716171 hsa-miR-6766-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6849-5p 1 0 0
chr12:57715940|57716171 hsa-miR-6724-5p 1 0 0
chr12:57715940|57716171 hsa-miR-320a-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr12:57715940|57716171
ORF Type ORF1
Protein Length 61
Nucleotide Length 186
Protein Sequence MVSLHTWGPRSCSSSMILSPYCFESTEKQHASRPGTHSSSYSILDLLPPPAPVSPRLLLLL
Nucleotide Sequence TTGGTCTCACTCCACACTTGGGGGCCTAGATCTTGCAGCTCCTCTATGATTTTATCTCCATACTGCTTTGAGTCTACTGAGAAACAGCATGCAAGCAGGCCAGGAACACATTCCTCCAGCTATTCAATACTTGATCTTTTGCCACCCCCTGCCCCCGTATCTCCCCGTCTTCTCCTCCTTCTCTAA
CircID chr12:57715940|57716171
ORF Type ORF2
Protein Length 46
Nucleotide Length 141
Protein Sequence MSLLRNSMQAGQEHIPPAIQYLIFCHPLPPYLPVFSSFSNYSPACL
Nucleotide Sequence TTGAGTCTACTGAGAAACAGCATGCAAGCAGGCCAGGAACACATTCCTCCAGCTATTCAATACTTGATCTTTTGCCACCCCCTGCCCCCGTATCTCCCCGTCTTCTCCTCCTTCTCTAATTACTCACCGGCTTGCCTCTGA
CircID chr12:57715940|57716171
ORF Type ORF3
Protein Length 42
Nucleotide Length 126
Protein Sequence MEECVPGLLACCFSVDSKQYGDKIIEELQDLGPQVWSETKSG
Nucleotide Sequence CTGGAGGAATGTGTTCCTGGCCTGCTTGCATGCTGTTTCTCAGTAGACTCAAAGCAGTATGGAGATAAAATCATAGAGGAGCTGCAAGATCTAGGCCCCCAAGTGTGGAGTGAGACCAAGTCTGGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab