CircRNA Information

General Information
circRNA Basic Information
CircID chr12:57716127|57716500
Strand +
CircType exon
Host Gene ENSG00000135506.14;
Algorism CIRI2;
Sequence CTCCTCCCCTCCTGGGGCCTGGTCCTCTGGCTCATTAAGCATCTTCCAGAAATCTGAGTCCTTACTGTCATCCTTGGTCGGGCTCGCACCTAGGGTACAGAGAACAGGGAGAGACTGATCTGACAGGAGGGGTGAGACAGAAGGGAGCAAATAGGATGGGGTCCCTTCCCCTCCTCTATCACCAAGGGAGGAGGGCCCATGGTACTTTTCCACCCCCCCCCACCCCACCAGTCAGTCAGGACAGTAAGATCAGGGGAAGGGAAGAAATGGAAGTGAGTTTCACGGAACAGGTGAAACAAGGTCCTACCTGCCATCTTTTGGGGTGCCACCCCAGACTTGGTCTCACTCCACACTTGGGGGCCTAGATCTTGCAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:57716127|57716500 hsa-miR-204-5p 0 0 1
chr12:57716127|57716500 hsa-miR-204-3p 0 0 1
chr12:57716127|57716500 hsa-miR-211-5p 0 0 1
chr12:57716127|57716500 hsa-miR-211-3p 0 0 1
chr12:57716127|57716500 hsa-miR-122-5p 0 0 1
chr12:57716127|57716500 hsa-miR-122-3p 0 0 1
chr12:57716127|57716500 hsa-miR-595 0 0 1
chr12:57716127|57716500 hsa-miR-608 1 1 1
chr12:57716127|57716500 hsa-miR-622 0 0 1
chr12:57716127|57716500 hsa-miR-623 0 0 1
chr12:57716127|57716500 hsa-miR-637 0 0 1
chr12:57716127|57716500 hsa-miR-645 0 0 1
chr12:57716127|57716500 hsa-miR-765 0 0 1
chr12:57716127|57716500 hsa-miR-541-5p 0 0 1
chr12:57716127|57716500 hsa-miR-541-3p 0 0 1
chr12:57716127|57716500 hsa-miR-877-5p 0 0 1
chr12:57716127|57716500 hsa-miR-877-3p 0 0 1
chr12:57716127|57716500 hsa-miR-665 0 1 1
chr12:57716127|57716500 hsa-miR-1229-5p 0 0 1
chr12:57716127|57716500 hsa-miR-1229-3p 0 0 1
chr12:57716127|57716500 hsa-miR-1237-5p 0 0 1
chr12:57716127|57716500 hsa-miR-1237-3p 0 0 1
chr12:57716127|57716500 hsa-miR-548k 0 0 1
chr12:57716127|57716500 hsa-miR-1299 0 1 1
chr12:57716127|57716500 hsa-miR-548n 0 0 1
chr12:57716127|57716500 hsa-miR-769-5p 0 0 1
chr12:57716127|57716500 hsa-miR-296-5p 0 0 1
chr12:57716127|57716500 hsa-miR-339-5p 0 0 1
chr12:57716127|57716500 hsa-miR-654-5p 0 0 1
chr12:57716127|57716500 hsa-miR-331-3p 0 0 1
chr12:57716127|57716500 hsa-miR-875-3p 0 0 1
chr12:57716127|57716500 hsa-miR-1207-5p 0 0 1
chr12:57716127|57716500 hsa-miR-342-5p 0 0 1
chr12:57716127|57716500 hsa-miR-1274a 0 0 1
chr12:57716127|57716500 hsa-miR-1274b 0 0 1
chr12:57716127|57716500 hsa-miR-7 0 0 1
chr12:57716127|57716500 hsa-miR-516b 0 0 1
chr12:57716127|57716500 hsa-miR-591 0 1 0
chr12:57716127|57716500 hsa-miR-762 1 0 0
chr12:57716127|57716500 hsa-miR-921 0 1 0
chr12:57716127|57716500 hsa-miR-2117 0 1 0
chr12:57716127|57716500 hsa-miR-3131 1 0 0
chr12:57716127|57716500 hsa-miR-4287 0 1 0
chr12:57716127|57716500 hsa-miR-4290 0 1 0
chr12:57716127|57716500 hsa-miR-4466 1 0 0
chr12:57716127|57716500 hsa-miR-4475 0 1 0
chr12:57716127|57716500 hsa-miR-4513 1 1 0
chr12:57716127|57716500 hsa-miR-4534 0 1 0
chr12:57716127|57716500 hsa-miR-4651 0 1 0
chr12:57716127|57716500 hsa-miR-4734 1 0 0
chr12:57716127|57716500 hsa-miR-4739 1 0 0
chr12:57716127|57716500 hsa-miR-4741 1 0 0
chr12:57716127|57716500 hsa-miR-6745 0 1 0
chr12:57716127|57716500 hsa-miR-8078 1 0 0
chr12:57716127|57716500 hsa-miR-26b-3p 0 1 0
chr12:57716127|57716500 hsa-miR-92a-2-5p 0 1 0
chr12:57716127|57716500 hsa-miR-6765-5p 1 0 0
chr12:57716127|57716500 hsa-miR-6894-5p 1 0 0
chr12:57716127|57716500 hsa-miR-4786-5p 1 1 0
chr12:57716127|57716500 hsa-miR-6807-5p 0 1 0
chr12:57716127|57716500 hsa-miR-6744-5p 0 1 0
chr12:57716127|57716500 hsa-miR-3064-5p 0 1 0
chr12:57716127|57716500 hsa-miR-6875-3p 0 1 0
chr12:57716127|57716500 hsa-miR-6873-3p 0 1 0
chr12:57716127|57716500 hsa-miR-7110-3p 0 1 0
chr12:57716127|57716500 hsa-miR-6845-3p 0 1 0
chr12:57716127|57716500 hsa-miR-6783-5p 0 1 0
chr12:57716127|57716500 hsa-miR-6742-5p 1 1 0
chr12:57716127|57716500 hsa-miR-3605-5p 0 1 0
chr12:57716127|57716500 hsa-miR-1224-5p 1 0 0
chr12:57716127|57716500 hsa-miR-6782-5p 1 1 0
chr12:57716127|57716500 hsa-miR-3156-5p 0 1 0
chr12:57716127|57716500 hsa-miR-3691-3p 0 1 0
chr12:57716127|57716500 hsa-miR-6786-5p 1 0 0
chr12:57716127|57716500 hsa-miR-939-3p 1 0 0
chr12:57716127|57716500 hsa-miR-5088-5p 1 0 0
chr12:57716127|57716500 hsa-miR-4640-5p 1 0 0
chr12:57716127|57716500 hsa-miR-3667-3p 0 1 0
chr12:57716127|57716500 hsa-miR-6771-5p 1 0 0
chr12:57716127|57716500 hsa-miR-4743-3p 0 1 0
chr12:57716127|57716500 hsa-miR-1266-3p 1 1 0
chr12:57716127|57716500 hsa-miR-4667-3p 0 1 0
chr12:57716127|57716500 hsa-miR-378a-5p 0 1 0
chr12:57716127|57716500 hsa-miR-2276-3p 0 1 0
chr12:57716127|57716500 hsa-miR-6769a-3p 1 0 0
chr12:57716127|57716500 hsa-miR-1236-3p 0 1 0
chr12:57716127|57716500 hsa-miR-7106-3p 0 1 0
chr12:57716127|57716500 hsa-miR-6867-3p 0 1 0
chr12:57716127|57716500 hsa-miR-361-3p 0 1 0
chr12:57716127|57716500 hsa-miR-2355-3p 0 1 0
chr12:57716127|57716500 hsa-miR-6886-3p 0 1 0
chr12:57716127|57716500 hsa-miR-5088-3p 0 1 0
chr12:57716127|57716500 hsa-miR-6802-3p 0 1 0
chr12:57716127|57716500 hsa-miR-6734-3p 0 1 0
chr12:57716127|57716500 hsa-miR-6750-3p 0 1 0
chr12:57716127|57716500 hsa-miR-6888-3p 0 1 0
chr12:57716127|57716500 hsa-miR-4763-3p 1 0 0
chr12:57716127|57716500 hsa-miR-6769b-5p 1 1 0
chr12:57716127|57716500 hsa-miR-6812-5p 1 1 0
chr12:57716127|57716500 hsa-miR-6865-5p 0 1 0
chr12:57716127|57716500 hsa-miR-6737-5p 1 1 0
chr12:57716127|57716500 hsa-miR-6752-5p 1 1 0
chr12:57716127|57716500 hsa-miR-6756-5p 1 1 0
chr12:57716127|57716500 hsa-miR-6803-5p 1 0 0
chr12:57716127|57716500 hsa-miR-6819-5p 1 1 0
chr12:57716127|57716500 hsa-miR-4685-3p 0 1 0
chr12:57716127|57716500 hsa-miR-3620-5p 1 0 0
chr12:57716127|57716500 hsa-miR-4728-5p 0 1 0
chr12:57716127|57716500 hsa-miR-328-5p 1 0 0
chr12:57716127|57716500 hsa-miR-4726-5p 1 1 0
chr12:57716127|57716500 hsa-miR-6848-5p 1 0 0
chr12:57716127|57716500 hsa-miR-3940-5p 1 0 0
chr12:57716127|57716500 hsa-miR-4747-5p 0 1 0
chr12:57716127|57716500 hsa-miR-4472 0 1 0
chr12:57716127|57716500 hsa-miR-6724-5p 1 0 0
chr12:57716127|57716500 hsa-miR-10398-5p 0 1 0
chr12:57716127|57716500 hsa-miR-6784-3p 0 1 0
chr12:57716127|57716500 hsa-miR-6862-3p 1 1 0
chr12:57716127|57716500 hsa-miR-3085-3p 1 0 0
chr12:57716127|57716500 hsa-miR-5006-3p 0 1 0
chr12:57716127|57716500 hsa-miR-3136-5p 0 1 0
chr12:57716127|57716500 hsa-miR-371b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr12:57716127|57716500
ORF Type ORF1
Protein Length 25
Nucleotide Length 78
Protein Sequence MVLFHPPPPHQSVRTVRSGEGKKWK
Nucleotide Sequence ATGGTACTTTTCCACCCCCCCCCACCCCACCAGTCAGTCAGGACAGTAAGATCAGGGGAAGGGAAGAAATGGAAGTGA

CircID chr12:57716127|57716500
ORF Type ORF2
Protein Length 103
Nucleotide Length 312
Protein Sequence MSPYCHPWSGSHLGYREQGETDLTGGVRQKGANRMGSLPLLYHQGRRAHGTFPPPPTPPVSQDSKIRGREEMEVSFTEQVKQGPTCHLLGCHPRLGLTPHLGA
Nucleotide Sequence CTGAGTCCTTACTGTCATCCTTGGTCGGGCTCGCACCTAGGGTACAGAGAACAGGGAGAGACTGATCTGACAGGAGGGGTGAGACAGAAGGGAGCAAATAGGATGGGGTCCCTTCCCCTCCTCTATCACCAAGGGAGGAGGGCCCATGGTACTTTTCCACCCCCCCCCACCCCACCAGTCAGTCAGGACAGTAAGATCAGGGGAAGGGAAGAAATGGAAGTGAGTTTCACGGAACAGGTGAAACAAGGTCCTACCTGCCATCTTTTGGGGTGCCACCCCAGACTTGGTCTCACTCCACACTTGGGGGCCTAG

CircID chr12:57716127|57716500
ORF Type ORF3
Protein Length 94
Nucleotide Length 285
Protein Sequence LQDLGPQVWSETKSGVAPQKMAGRTLFHLFRETHFHFFPSPDLTVLTDWWGGGGWKSTMGPPPLVIEEGKGPHPICSLLSHPSCQISLSLFSVP
Nucleotide Sequence CTGCAAGATCTAGGCCCCCAAGTGTGGAGTGAGACCAAGTCTGGGGTGGCACCCCAAAAGATGGCAGGTAGGACCTTGTTTCACCTGTTCCGTGAAACTCACTTCCATTTCTTCCCTTCCCCTGATCTTACTGTCCTGACTGACTGGTGGGGTGGGGGGGGGTGGAAAAGTACCATGGGCCCTCCTCCCTTGGTGATAGAGGAGGGGAAGGGACCCCATCCTATTTGCTCCCTTCTGTCTCACCCCTCCTGTCAGATCAGTCTCTCCCTGTTCTCTGTACCCTAG

CircID chr12:57716127|57716500
ORF Type ORF4
Protein Length 32
Nucleotide Length 99
Protein Sequence MGWHPKRWQVGPCFTCSVKLTSISSLPLILLS
Nucleotide Sequence CTGGGGTGGCACCCCAAAAGATGGCAGGTAGGACCTTGTTTCACCTGTTCCGTGAAACTCACTTCCATTTCTTCCCTTCCCCTGATCTTACTGTCCTGA

CircID chr12:57716127|57716500
ORF Type ORF5
Protein Length 77
Nucleotide Length 231
Protein Sequence MVGWGGVEKYHGPSSLGDRGGEGTPSYLLPSVSPLLSDQSLPVLCTLGASPTKDDSKDSDFWKMLNEPEDQAPGGEE
Nucleotide Sequence CTGGTGGGGTGGGGGGGGGTGGAAAAGTACCATGGGCCCTCCTCCCTTGGTGATAGAGGAGGGGAAGGGACCCCATCCTATTTGCTCCCTTCTGTCTCACCCCTCCTGTCAGATCAGTCTCTCCCTGTTCTCTGTACCCTAGGTGCGAGCCCGACCAAGGATGACAGTAAGGACTCAGATTTCTGGAAGATGCTTAATGAGCCAGAGGACCAGGCCCCAGGAGGGGAGGAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites