CircRNA Information

General Information
circRNA Basic Information
CircID chr12:57720889|57721096
Strand -
CircType exon
Host Gene ENSG00000135506.14;
Algorism CIRI2;
Sequence CTGGACGAATTTGACTTCTGAGACCAACACTACACTTGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCCCCACCCTGGAACCCCTGAGGGCCAAACAGCAGAGTGGAGCTGAGCTGTGGACCTCTCGGGCAACTCTGTGGGTGTGGGGGCCCTGGGTGAATGCTGCTGCCCCTGCTGGCAGCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:57720889|57721096 hsa-miR-15a-5p 0 0 1
chr12:57720889|57721096 hsa-miR-15a-3p 0 0 1
chr12:57720889|57721096 hsa-miR-107 0 1 1
chr12:57720889|57721096 hsa-miR-214-5p 0 0 1
chr12:57720889|57721096 hsa-miR-214-3p 0 0 1
chr12:57720889|57721096 hsa-miR-15b-5p 0 0 1
chr12:57720889|57721096 hsa-miR-15b-3p 0 0 1
chr12:57720889|57721096 hsa-miR-195-5p 0 0 1
chr12:57720889|57721096 hsa-miR-195-3p 0 0 1
chr12:57720889|57721096 hsa-miR-328-5p 0 0 1
chr12:57720889|57721096 hsa-miR-328-3p 0 0 1
chr12:57720889|57721096 hsa-miR-424-5p 0 0 1
chr12:57720889|57721096 hsa-miR-424-3p 0 0 1
chr12:57720889|57721096 hsa-miR-497-5p 0 0 1
chr12:57720889|57721096 hsa-miR-497-3p 0 0 1
chr12:57720889|57721096 hsa-miR-575 0 0 1
chr12:57720889|57721096 hsa-miR-604 0 0 1
chr12:57720889|57721096 hsa-miR-647 0 0 1
chr12:57720889|57721096 hsa-miR-650 1 1 1
chr12:57720889|57721096 hsa-miR-765 0 0 1
chr12:57720889|57721096 hsa-miR-665 0 0 1
chr12:57720889|57721096 hsa-miR-939-5p 0 0 1
chr12:57720889|57721096 hsa-miR-939-3p 0 0 1
chr12:57720889|57721096 hsa-miR-1179 0 0 1
chr12:57720889|57721096 hsa-miR-1202 0 1 1
chr12:57720889|57721096 hsa-miR-1291 0 0 1
chr12:57720889|57721096 hsa-miR-1266-5p 0 0 1
chr12:57720889|57721096 hsa-miR-1266-3p 0 0 1
chr12:57720889|57721096 hsa-miR-296-5p 0 0 1
chr12:57720889|57721096 hsa-miR-491-5p 1 1 1
chr12:57720889|57721096 hsa-miR-486-3p 0 1 1
chr12:57720889|57721096 hsa-miR-455-3p 0 0 1
chr12:57720889|57721096 hsa-miR-142-3p 0 0 1
chr12:57720889|57721096 hsa-miR-103 0 0 1
chr12:57720889|57721096 hsa-miR-16 0 0 1
chr12:57720889|57721096 hsa-miR-608 1 0 0
chr12:57720889|57721096 hsa-miR-762 1 0 0
chr12:57720889|57721096 hsa-miR-940 1 0 0
chr12:57720889|57721096 hsa-miR-1268a 1 0 0
chr12:57720889|57721096 hsa-miR-1275 1 0 0
chr12:57720889|57721096 hsa-miR-3132 1 0 0
chr12:57720889|57721096 hsa-miR-3141 1 0 0
chr12:57720889|57721096 hsa-miR-3196 1 0 0
chr12:57720889|57721096 hsa-miR-4310 0 1 0
chr12:57720889|57721096 hsa-miR-4281 1 0 0
chr12:57720889|57721096 hsa-miR-4280 0 1 0
chr12:57720889|57721096 hsa-miR-1268b 1 0 0
chr12:57720889|57721096 hsa-miR-4523 1 1 0
chr12:57720889|57721096 hsa-miR-4530 0 1 0
chr12:57720889|57721096 hsa-miR-4533 1 0 0
chr12:57720889|57721096 hsa-miR-3972 1 0 0
chr12:57720889|57721096 hsa-miR-4651 1 1 0
chr12:57720889|57721096 hsa-miR-4688 1 1 0
chr12:57720889|57721096 hsa-miR-4706 1 0 0
chr12:57720889|57721096 hsa-miR-4734 1 0 0
chr12:57720889|57721096 hsa-miR-4739 1 1 0
chr12:57720889|57721096 hsa-miR-4741 1 0 0
chr12:57720889|57721096 hsa-miR-4767 1 0 0
chr12:57720889|57721096 hsa-miR-5194 1 0 0
chr12:57720889|57721096 hsa-miR-5787 1 0 0
chr12:57720889|57721096 hsa-miR-6086 1 0 0
chr12:57720889|57721096 hsa-miR-6134 1 1 0
chr12:57720889|57721096 hsa-miR-6745 1 0 0
chr12:57720889|57721096 hsa-miR-92a-2-5p 0 1 0
chr12:57720889|57721096 hsa-miR-6747-5p 1 0 0
chr12:57720889|57721096 hsa-miR-7106-5p 1 1 0
chr12:57720889|57721096 hsa-miR-6825-5p 1 1 0
chr12:57720889|57721096 hsa-miR-6894-5p 1 0 0
chr12:57720889|57721096 hsa-miR-6857-5p 1 0 0
chr12:57720889|57721096 hsa-miR-6854-5p 0 1 0
chr12:57720889|57721096 hsa-miR-6799-5p 1 1 0
chr12:57720889|57721096 hsa-miR-766-5p 1 0 0
chr12:57720889|57721096 hsa-miR-7847-3p 1 0 0
chr12:57720889|57721096 hsa-miR-4695-5p 1 1 0
chr12:57720889|57721096 hsa-miR-6762-3p 1 0 0
chr12:57720889|57721096 hsa-miR-6787-3p 0 1 0
chr12:57720889|57721096 hsa-miR-6742-5p 1 0 0
chr12:57720889|57721096 hsa-miR-3180-3p 1 0 0
chr12:57720889|57721096 hsa-miR-6748-5p 1 0 0
chr12:57720889|57721096 hsa-miR-6732-5p 1 0 0
chr12:57720889|57721096 hsa-miR-656-5p 0 1 0
chr12:57720889|57721096 hsa-miR-6805-5p 1 0 0
chr12:57720889|57721096 hsa-miR-23a-5p 1 1 0
chr12:57720889|57721096 hsa-miR-6881-5p 1 0 0
chr12:57720889|57721096 hsa-miR-6782-5p 1 0 0
chr12:57720889|57721096 hsa-miR-3194-5p 1 0 0
chr12:57720889|57721096 hsa-miR-6728-3p 0 1 0
chr12:57720889|57721096 hsa-miR-5006-5p 1 0 0
chr12:57720889|57721096 hsa-miR-532-3p 0 1 0
chr12:57720889|57721096 hsa-miR-6786-5p 1 0 0
chr12:57720889|57721096 hsa-miR-7109-5p 1 0 0
chr12:57720889|57721096 hsa-miR-1229-5p 1 0 0
chr12:57720889|57721096 hsa-miR-885-3p 1 0 0
chr12:57720889|57721096 hsa-miR-1908-5p 1 0 0
chr12:57720889|57721096 hsa-miR-1228-5p 1 0 0
chr12:57720889|57721096 hsa-miR-296-3p 1 0 0
chr12:57720889|57721096 hsa-miR-6771-5p 1 0 0
chr12:57720889|57721096 hsa-miR-4787-5p 1 0 0
chr12:57720889|57721096 hsa-miR-103a-3p 0 1 0
chr12:57720889|57721096 hsa-miR-149-3p 1 0 0
chr12:57720889|57721096 hsa-miR-6736-3p 0 1 0
chr12:57720889|57721096 hsa-miR-6789-5p 1 0 0
chr12:57720889|57721096 hsa-miR-6802-5p 1 0 0
chr12:57720889|57721096 hsa-miR-6864-5p 1 1 0
chr12:57720889|57721096 hsa-miR-7112-5p 1 0 0
chr12:57720889|57721096 hsa-miR-7160-3p 0 1 0
chr12:57720889|57721096 hsa-miR-3191-3p 1 0 0
chr12:57720889|57721096 hsa-miR-6777-3p 0 1 0
chr12:57720889|57721096 hsa-miR-5007-5p 0 1 0
chr12:57720889|57721096 hsa-miR-4740-3p 1 1 0
chr12:57720889|57721096 hsa-miR-1233-5p 1 0 0
chr12:57720889|57721096 hsa-miR-4763-3p 1 0 0
chr12:57720889|57721096 hsa-miR-6769b-5p 1 0 0
chr12:57720889|57721096 hsa-miR-6778-5p 1 0 0
chr12:57720889|57721096 hsa-miR-6787-5p 1 0 0
chr12:57720889|57721096 hsa-miR-6816-5p 1 0 0
chr12:57720889|57721096 hsa-miR-6865-5p 1 0 0
chr12:57720889|57721096 hsa-miR-1343-5p 1 0 0
chr12:57720889|57721096 hsa-miR-3180 1 0 0
chr12:57720889|57721096 hsa-miR-6726-5p 1 0 0
chr12:57720889|57721096 hsa-miR-6737-5p 1 0 0
chr12:57720889|57721096 hsa-miR-6743-5p 1 0 0
chr12:57720889|57721096 hsa-miR-6752-5p 1 0 0
chr12:57720889|57721096 hsa-miR-6754-5p 1 0 0
chr12:57720889|57721096 hsa-miR-6756-5p 1 1 0
chr12:57720889|57721096 hsa-miR-6769a-5p 1 0 0
chr12:57720889|57721096 hsa-miR-6803-5p 1 0 0
chr12:57720889|57721096 hsa-miR-6815-5p 1 0 0
chr12:57720889|57721096 hsa-miR-6819-5p 1 0 0
chr12:57720889|57721096 hsa-miR-6842-5p 1 0 0
chr12:57720889|57721096 hsa-miR-6851-5p 1 1 0
chr12:57720889|57721096 hsa-miR-7110-5p 1 0 0
chr12:57720889|57721096 hsa-miR-11181-3p 1 1 0
chr12:57720889|57721096 hsa-miR-1249-5p 1 0 0
chr12:57720889|57721096 hsa-miR-6722-3p 1 1 0
chr12:57720889|57721096 hsa-miR-6751-5p 1 0 0
chr12:57720889|57721096 hsa-miR-6763-5p 1 1 0
chr12:57720889|57721096 hsa-miR-7111-5p 1 1 0
chr12:57720889|57721096 hsa-miR-4728-5p 1 0 0
chr12:57720889|57721096 hsa-miR-5196-5p 1 0 0
chr12:57720889|57721096 hsa-miR-6780b-5p 1 0 0
chr12:57720889|57721096 hsa-miR-1237-5p 1 0 0
chr12:57720889|57721096 hsa-miR-1909-3p 1 1 0
chr12:57720889|57721096 hsa-miR-4685-5p 1 1 0
chr12:57720889|57721096 hsa-miR-4725-3p 1 0 0
chr12:57720889|57721096 hsa-miR-4745-5p 1 0 0
chr12:57720889|57721096 hsa-miR-675-5p 1 0 0
chr12:57720889|57721096 hsa-miR-6795-5p 1 0 0
chr12:57720889|57721096 hsa-miR-6858-5p 1 0 0
chr12:57720889|57721096 hsa-miR-6883-5p 1 0 0
chr12:57720889|57721096 hsa-miR-6885-5p 1 0 0
chr12:57720889|57721096 hsa-miR-1914-3p 1 0 0
chr12:57720889|57721096 hsa-miR-4747-5p 1 0 0
chr12:57720889|57721096 hsa-miR-4676-5p 0 1 0
chr12:57720889|57721096 hsa-miR-3619-5p 0 1 0
chr12:57720889|57721096 hsa-miR-7157-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr12:57720889|57721096
ORF Type ORF1
Protein Length 66
Nucleotide Length 198
Protein Sequence MTSETNTTLDPSRNPDSSWTGLPPPHLPTLEPLRAKQQSGAELWTSRATLWVWGPWVNAAAPAGSH
Nucleotide Sequence TTGACTTCTGAGACCAACACTACACTTGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCCCCACCCTGGAACCCCTGAGGGCCAAACAGCAGAGTGGAGCTGAGCTGTGGACCTCTCGGGCAACTCTGTGGGTGTGGGGGCCCTGGGTGAATGCTGCTGCCCCTGCTGGCAGCCAC
CircID chr12:57720889|57721096
ORF Type ORF2
Protein Length 30
Nucleotide Length 93
Protein Sequence MRPTLHLTLHGIQTLPGLACLLPTSPPWNP
Nucleotide Sequence CTGAGACCAACACTACACTTGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCCCCACCCTGGAACCCCTGA
CircID chr12:57720889|57721096
ORF Type ORF3
Protein Length 26
Nucleotide Length 81
Protein Sequence MLFGPQGFQGGEVGRRQASPGRVWIP
Nucleotide Sequence CTGCTGTTTGGCCCTCAGGGGTTCCAGGGTGGGGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGA
CircID chr12:57720889|57721096
ORF Type ORF4
Protein Length 68
Nucleotide Length 204
Protein Sequence MPAGAAAFTQGPHTHRVAREVHSSAPLCCLALRGSRVGRWGGGKPVQEESGFREGSSVVLVSEVKFVQ
Nucleotide Sequence CTGCCAGCAGGGGCAGCAGCATTCACCCAGGGCCCCCACACCCACAGAGTTGCCCGAGAGGTCCACAGCTCAGCTCCACTCTGCTGTTTGGCCCTCAGGGGTTCCAGGGTGGGGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCAAGTGTAGTGTTGGTCTCAGAAGTCAAATTCGTCCAG
CircID chr12:57720889|57721096
ORF Type ORF5
Protein Length 41
Nucleotide Length 126
Protein Sequence MPERSTAQLHSAVWPSGVPGWGGGEEASQSRKSLDSVKGQV
Nucleotide Sequence TTGCCCGAGAGGTCCACAGCTCAGCTCCACTCTGCTGTTTGGCCCTCAGGGGTTCCAGGGTGGGGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCAAGTGTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab