CircRNA Information

General Information
circRNA Basic Information
CircID chr12:57720895|57721019
Strand -
CircType exon
Host Gene ENSG00000135506.14;
Algorism CIRI2;
Sequence GAATTTGACTTCTGAGACCAACACTACACTTGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCCCCACCCTGGAACCCCTGAGGGCCAAACAGCAGAGTGGAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:57720895|57721019 hsa-miR-328-5p 0 0 1
chr12:57720895|57721019 hsa-miR-328-3p 0 0 1
chr12:57720895|57721019 hsa-miR-575 0 0 1
chr12:57720895|57721019 hsa-miR-650 1 1 1
chr12:57720895|57721019 hsa-miR-765 0 0 1
chr12:57720895|57721019 hsa-miR-665 0 0 1
chr12:57720895|57721019 hsa-miR-939-5p 0 0 1
chr12:57720895|57721019 hsa-miR-939-3p 0 0 1
chr12:57720895|57721019 hsa-miR-1291 0 0 1
chr12:57720895|57721019 hsa-miR-1266-5p 0 0 1
chr12:57720895|57721019 hsa-miR-1266-3p 0 0 1
chr12:57720895|57721019 hsa-miR-491-5p 1 1 1
chr12:57720895|57721019 hsa-miR-455-3p 0 0 1
chr12:57720895|57721019 hsa-miR-142-3p 0 0 1
chr12:57720895|57721019 hsa-miR-572 1 0 0
chr12:57720895|57721019 hsa-miR-608 1 0 0
chr12:57720895|57721019 hsa-miR-762 1 0 0
chr12:57720895|57721019 hsa-miR-1268a 1 0 0
chr12:57720895|57721019 hsa-miR-1275 1 0 0
chr12:57720895|57721019 hsa-miR-3141 1 0 0
chr12:57720895|57721019 hsa-miR-4281 1 0 0
chr12:57720895|57721019 hsa-miR-4280 0 1 0
chr12:57720895|57721019 hsa-miR-1268b 1 0 0
chr12:57720895|57721019 hsa-miR-4449 1 0 0
chr12:57720895|57721019 hsa-miR-4533 1 0 0
chr12:57720895|57721019 hsa-miR-4651 1 1 0
chr12:57720895|57721019 hsa-miR-4706 1 0 0
chr12:57720895|57721019 hsa-miR-4739 1 1 0
chr12:57720895|57721019 hsa-miR-5194 1 0 0
chr12:57720895|57721019 hsa-miR-5787 1 0 0
chr12:57720895|57721019 hsa-miR-6086 1 0 0
chr12:57720895|57721019 hsa-miR-6134 1 1 0
chr12:57720895|57721019 hsa-miR-6745 1 0 0
chr12:57720895|57721019 hsa-miR-12127 1 0 0
chr12:57720895|57721019 hsa-miR-92a-2-5p 0 1 0
chr12:57720895|57721019 hsa-miR-6747-5p 1 0 0
chr12:57720895|57721019 hsa-miR-7106-5p 1 1 0
chr12:57720895|57721019 hsa-miR-6825-5p 1 1 0
chr12:57720895|57721019 hsa-miR-6894-5p 1 0 0
chr12:57720895|57721019 hsa-miR-6857-5p 1 0 0
chr12:57720895|57721019 hsa-miR-6799-5p 1 1 0
chr12:57720895|57721019 hsa-miR-766-5p 1 0 0
chr12:57720895|57721019 hsa-miR-7847-3p 1 0 0
chr12:57720895|57721019 hsa-miR-4695-5p 1 1 0
chr12:57720895|57721019 hsa-miR-4722-5p 1 0 0
chr12:57720895|57721019 hsa-miR-23b-5p 1 0 0
chr12:57720895|57721019 hsa-miR-6742-5p 1 0 0
chr12:57720895|57721019 hsa-miR-3151-5p 1 0 0
chr12:57720895|57721019 hsa-miR-3180-3p 1 0 0
chr12:57720895|57721019 hsa-miR-6748-5p 1 0 0
chr12:57720895|57721019 hsa-miR-6793-5p 1 0 0
chr12:57720895|57721019 hsa-miR-6732-5p 1 0 0
chr12:57720895|57721019 hsa-miR-6805-5p 1 0 0
chr12:57720895|57721019 hsa-miR-23a-5p 1 1 0
chr12:57720895|57721019 hsa-miR-6798-5p 1 0 0
chr12:57720895|57721019 hsa-miR-6782-5p 1 0 0
chr12:57720895|57721019 hsa-miR-3194-5p 1 0 0
chr12:57720895|57721019 hsa-miR-6728-3p 0 1 0
chr12:57720895|57721019 hsa-miR-6810-5p 1 0 0
chr12:57720895|57721019 hsa-miR-5006-5p 1 0 0
chr12:57720895|57721019 hsa-miR-6786-5p 1 0 0
chr12:57720895|57721019 hsa-miR-7109-5p 1 0 0
chr12:57720895|57721019 hsa-miR-1229-5p 1 0 0
chr12:57720895|57721019 hsa-miR-193b-5p 1 0 0
chr12:57720895|57721019 hsa-miR-1908-5p 1 0 0
chr12:57720895|57721019 hsa-miR-1228-5p 1 0 0
chr12:57720895|57721019 hsa-miR-296-3p 1 0 0
chr12:57720895|57721019 hsa-miR-6771-5p 1 0 0
chr12:57720895|57721019 hsa-miR-4713-3p 1 0 0
chr12:57720895|57721019 hsa-miR-4787-5p 1 0 0
chr12:57720895|57721019 hsa-miR-149-3p 1 0 0
chr12:57720895|57721019 hsa-miR-6802-5p 1 0 0
chr12:57720895|57721019 hsa-miR-6864-5p 0 1 0
chr12:57720895|57721019 hsa-miR-3191-3p 1 0 0
chr12:57720895|57721019 hsa-miR-6777-3p 0 1 0
chr12:57720895|57721019 hsa-miR-5007-5p 0 1 0
chr12:57720895|57721019 hsa-miR-1233-5p 1 0 0
chr12:57720895|57721019 hsa-miR-1273h-5p 1 0 0
chr12:57720895|57721019 hsa-miR-6769b-5p 1 0 0
chr12:57720895|57721019 hsa-miR-6778-5p 1 0 0
chr12:57720895|57721019 hsa-miR-6787-5p 1 0 0
chr12:57720895|57721019 hsa-miR-6816-5p 1 0 0
chr12:57720895|57721019 hsa-miR-6865-5p 1 0 0
chr12:57720895|57721019 hsa-miR-1343-5p 1 0 0
chr12:57720895|57721019 hsa-miR-3180 1 0 0
chr12:57720895|57721019 hsa-miR-6726-5p 1 0 0
chr12:57720895|57721019 hsa-miR-6737-5p 1 0 0
chr12:57720895|57721019 hsa-miR-6752-5p 1 0 0
chr12:57720895|57721019 hsa-miR-6754-5p 1 0 0
chr12:57720895|57721019 hsa-miR-6756-5p 1 1 0
chr12:57720895|57721019 hsa-miR-6769a-5p 1 0 0
chr12:57720895|57721019 hsa-miR-6803-5p 1 0 0
chr12:57720895|57721019 hsa-miR-6815-5p 1 0 0
chr12:57720895|57721019 hsa-miR-6819-5p 1 0 0
chr12:57720895|57721019 hsa-miR-6842-5p 1 0 0
chr12:57720895|57721019 hsa-miR-6851-5p 1 1 0
chr12:57720895|57721019 hsa-miR-7110-5p 1 0 0
chr12:57720895|57721019 hsa-miR-11181-3p 1 1 0
chr12:57720895|57721019 hsa-miR-1249-5p 1 0 0
chr12:57720895|57721019 hsa-miR-6722-3p 1 0 0
chr12:57720895|57721019 hsa-miR-6751-5p 1 0 0
chr12:57720895|57721019 hsa-miR-6763-5p 1 1 0
chr12:57720895|57721019 hsa-miR-6779-5p 1 0 0
chr12:57720895|57721019 hsa-miR-6797-5p 1 0 0
chr12:57720895|57721019 hsa-miR-7111-5p 1 1 0
chr12:57720895|57721019 hsa-miR-4728-5p 1 0 0
chr12:57720895|57721019 hsa-miR-5196-5p 1 0 0
chr12:57720895|57721019 hsa-miR-6780b-5p 1 0 0
chr12:57720895|57721019 hsa-miR-1237-5p 1 0 0
chr12:57720895|57721019 hsa-miR-4685-5p 1 0 0
chr12:57720895|57721019 hsa-miR-4725-3p 1 0 0
chr12:57720895|57721019 hsa-miR-4745-5p 1 0 0
chr12:57720895|57721019 hsa-miR-675-5p 1 0 0
chr12:57720895|57721019 hsa-miR-6795-5p 1 0 0
chr12:57720895|57721019 hsa-miR-6846-5p 1 0 0
chr12:57720895|57721019 hsa-miR-6848-5p 1 0 0
chr12:57720895|57721019 hsa-miR-6858-5p 1 0 0
chr12:57720895|57721019 hsa-miR-6883-5p 1 0 0
chr12:57720895|57721019 hsa-miR-6885-5p 1 0 0
chr12:57720895|57721019 hsa-miR-4747-5p 1 0 0
chr12:57720895|57721019 hsa-miR-6766-5p 1 0 0
chr12:57720895|57721019 hsa-miR-6785-5p 1 0 0
chr12:57720895|57721019 hsa-miR-6837-5p 1 0 0
chr12:57720895|57721019 hsa-miR-4676-5p 0 1 0
chr12:57720895|57721019 hsa-miR-6764-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr12:57720895|57721019
ORF Type ORF1
Protein Length 40
Nucleotide Length 120
Protein Sequence MTSETNTTLDPSRNPDSSWTGLPPPHLPTLEPLRAKQQSG
Nucleotide Sequence TTGACTTCTGAGACCAACACTACACTTGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCCCCACCCTGGAACCCCTGAGGGCCAAACAGCAGAGTGGA
CircID chr12:57720895|57721019
ORF Type ORF2
Protein Length 30
Nucleotide Length 93
Protein Sequence MRPTLHLTLHGIQTLPGLACLLPTSPPWNP
Nucleotide Sequence CTGAGACCAACACTACACTTGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCCCCACCCTGGAACCCCTGA
CircID chr12:57720895|57721019
ORF Type ORF3
Protein Length 26
Nucleotide Length 81
Protein Sequence MLFGPQGFQGGEVGRRQASPGRVWIP
Nucleotide Sequence CTGCTGTTTGGCCCTCAGGGGTTCCAGGGTGGGGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGA
CircID chr12:57720895|57721019
ORF Type ORF4
Protein Length 37
Nucleotide Length 111
Protein Sequence MALRGSRVGRWGGGKPVQEESGFREGSSVVLVSEVKF
Nucleotide Sequence TTGGCCCTCAGGGGTTCCAGGGTGGGGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCAAGTGTAGTGTTGGTCTCAGAAGTCAAATTC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab