CircRNA Information

General Information
circRNA Basic Information
CircID chr12:57751297|57751578
Strand -
CircType exon
Host Gene ENSG00000135446.15;
Algorism CIRI2;
Sequence CTTGATCTCCCGGTCAGTTCGGGATGTGGCACAGACGTCCATCAGCCTGACCAGAGTAAATGCTCACTTTTCAATCCCCTTTAACCCAACATGGCCTCTCATTATTTCCTCAGGGTCCCCACTTCTCTACAGATCATCACACCCCACCTATAGGCTGTCTTTTCCCTTTACTCCCCACGCCCAACCCTCCACCACCTTCTCACCGGACAACATTGGGATGCTCAAAAGCCTCCAGTCGCCTCAGTAAAGCCACCTCACGAACTGTGCTGATGGGAAGGCCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:57751297|57751578 hsa-miR-484 0 0 1
chr12:57751297|57751578 hsa-miR-504-5p 0 0 1
chr12:57751297|57751578 hsa-miR-504-3p 0 0 1
chr12:57751297|57751578 hsa-miR-585-5p 0 0 1
chr12:57751297|57751578 hsa-miR-585-3p 0 0 1
chr12:57751297|57751578 hsa-miR-608 1 0 1
chr12:57751297|57751578 hsa-miR-650 0 0 1
chr12:57751297|57751578 hsa-miR-939-5p 0 0 1
chr12:57751297|57751578 hsa-miR-939-3p 0 0 1
chr12:57751297|57751578 hsa-miR-1227-5p 0 0 1
chr12:57751297|57751578 hsa-miR-1227-3p 0 0 1
chr12:57751297|57751578 hsa-miR-1294 0 1 1
chr12:57751297|57751578 hsa-miR-1253 0 0 1
chr12:57751297|57751578 hsa-miR-491-5p 1 1 1
chr12:57751297|57751578 hsa-miR-296-3p 1 1 1
chr12:57751297|57751578 hsa-miR-324-5p 0 0 1
chr12:57751297|57751578 hsa-miR-409-3p 1 1 1
chr12:57751297|57751578 hsa-miR-342-5p 1 0 1
chr12:57751297|57751578 hsa-miR-125a-5p 0 0 1
chr12:57751297|57751578 hsa-miR-125b 0 0 1
chr12:57751297|57751578 hsa-miR-1300 0 0 1
chr12:57751297|57751578 hsa-miR-1268 0 0 1
chr12:57751297|57751578 hsa-miR-637 1 1 0
chr12:57751297|57751578 hsa-miR-658 1 0 0
chr12:57751297|57751578 hsa-miR-762 1 0 0
chr12:57751297|57751578 hsa-miR-1183 1 0 0
chr12:57751297|57751578 hsa-miR-1293 1 0 0
chr12:57751297|57751578 hsa-miR-1268a 1 1 0
chr12:57751297|57751578 hsa-miR-1270 1 0 0
chr12:57751297|57751578 hsa-miR-2110 1 0 0
chr12:57751297|57751578 hsa-miR-2861 1 0 0
chr12:57751297|57751578 hsa-miR-3137 1 0 0
chr12:57751297|57751578 hsa-miR-3147 1 1 0
chr12:57751297|57751578 hsa-miR-3154 1 0 0
chr12:57751297|57751578 hsa-miR-3178 1 0 0
chr12:57751297|57751578 hsa-miR-3188 1 1 0
chr12:57751297|57751578 hsa-miR-4297 0 1 0
chr12:57751297|57751578 hsa-miR-4257 1 0 0
chr12:57751297|57751578 hsa-miR-4259 1 0 0
chr12:57751297|57751578 hsa-miR-4253 1 0 0
chr12:57751297|57751578 hsa-miR-3650 1 0 0
chr12:57751297|57751578 hsa-miR-3652 1 0 0
chr12:57751297|57751578 hsa-miR-3915 0 1 0
chr12:57751297|57751578 hsa-miR-3929 0 1 0
chr12:57751297|57751578 hsa-miR-1268b 1 1 0
chr12:57751297|57751578 hsa-miR-4440 1 0 0
chr12:57751297|57751578 hsa-miR-4443 1 0 0
chr12:57751297|57751578 hsa-miR-4450 1 1 0
chr12:57751297|57751578 hsa-miR-4466 1 0 0
chr12:57751297|57751578 hsa-miR-4492 1 0 0
chr12:57751297|57751578 hsa-miR-4496 1 0 0
chr12:57751297|57751578 hsa-miR-4505 1 0 0
chr12:57751297|57751578 hsa-miR-4507 1 0 0
chr12:57751297|57751578 hsa-miR-4516 1 0 0
chr12:57751297|57751578 hsa-miR-4525 1 0 0
chr12:57751297|57751578 hsa-miR-4534 1 0 0
chr12:57751297|57751578 hsa-miR-3960 1 0 0
chr12:57751297|57751578 hsa-miR-4651 1 0 0
chr12:57751297|57751578 hsa-miR-4658 1 0 0
chr12:57751297|57751578 hsa-miR-4669 1 0 0
chr12:57751297|57751578 hsa-miR-4689 1 1 0
chr12:57751297|57751578 hsa-miR-4706 1 0 0
chr12:57751297|57751578 hsa-miR-4710 1 0 0
chr12:57751297|57751578 hsa-miR-4784 1 0 0
chr12:57751297|57751578 hsa-miR-5093 1 0 0
chr12:57751297|57751578 hsa-miR-5194 1 0 0
chr12:57751297|57751578 hsa-miR-5572 1 0 0
chr12:57751297|57751578 hsa-miR-5698 1 0 0
chr12:57751297|57751578 hsa-miR-5739 1 0 0
chr12:57751297|57751578 hsa-miR-6086 1 0 0
chr12:57751297|57751578 hsa-miR-6090 1 0 0
chr12:57751297|57751578 hsa-miR-6133 1 0 0
chr12:57751297|57751578 hsa-miR-7974 1 0 0
chr12:57751297|57751578 hsa-miR-8052 1 0 0
chr12:57751297|57751578 hsa-miR-8075 0 1 0
chr12:57751297|57751578 hsa-miR-8089 1 0 0
chr12:57751297|57751578 hsa-miR-12114 1 0 0
chr12:57751297|57751578 hsa-miR-12119 1 1 0
chr12:57751297|57751578 hsa-miR-4433b-3p 1 0 0
chr12:57751297|57751578 hsa-miR-92a-2-5p 1 1 0
chr12:57751297|57751578 hsa-miR-6734-5p 1 0 0
chr12:57751297|57751578 hsa-miR-323a-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6747-5p 1 1 0
chr12:57751297|57751578 hsa-miR-4433a-3p 1 0 0
chr12:57751297|57751578 hsa-miR-6765-5p 1 1 0
chr12:57751297|57751578 hsa-miR-210-3p 1 0 0
chr12:57751297|57751578 hsa-miR-3150a-3p 1 0 0
chr12:57751297|57751578 hsa-miR-7106-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6825-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6857-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6799-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6728-5p 1 0 0
chr12:57751297|57751578 hsa-miR-8071 1 0 0
chr12:57751297|57751578 hsa-miR-6804-5p 1 0 0
chr12:57751297|57751578 hsa-miR-7114-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6515-5p 1 1 0
chr12:57751297|57751578 hsa-miR-6089 1 0 0
chr12:57751297|57751578 hsa-miR-3192-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6757-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6873-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6880-5p 1 0 0
chr12:57751297|57751578 hsa-miR-7847-3p 1 0 0
chr12:57751297|57751578 hsa-miR-6746-5p 1 1 0
chr12:57751297|57751578 hsa-miR-6730-5p 1 0 0
chr12:57751297|57751578 hsa-miR-3622b-5p 1 0 0
chr12:57751297|57751578 hsa-miR-3187-3p 1 0 0
chr12:57751297|57751578 hsa-miR-197-5p 1 0 0
chr12:57751297|57751578 hsa-miR-8069 1 0 0
chr12:57751297|57751578 hsa-miR-6742-5p 1 1 0
chr12:57751297|57751578 hsa-miR-6871-5p 1 0 0
chr12:57751297|57751578 hsa-miR-3151-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6748-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6772-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6796-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6732-5p 1 0 0
chr12:57751297|57751578 hsa-miR-3190-3p 1 0 0
chr12:57751297|57751578 hsa-miR-2467-5p 1 0 0
chr12:57751297|57751578 hsa-miR-23a-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6798-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6881-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6782-5p 1 0 0
chr12:57751297|57751578 hsa-miR-3156-5p 1 0 0
chr12:57751297|57751578 hsa-miR-3150b-3p 1 0 0
chr12:57751297|57751578 hsa-miR-6810-5p 1 0 0
chr12:57751297|57751578 hsa-miR-30b-3p 1 0 0
chr12:57751297|57751578 hsa-miR-5008-5p 1 0 0
chr12:57751297|57751578 hsa-miR-4733-5p 0 1 0
chr12:57751297|57751578 hsa-miR-6786-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6835-5p 1 0 0
chr12:57751297|57751578 hsa-miR-7109-5p 1 0 0
chr12:57751297|57751578 hsa-miR-1226-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6853-5p 1 0 0
chr12:57751297|57751578 hsa-miR-3944-3p 1 0 0
chr12:57751297|57751578 hsa-miR-1229-5p 1 0 0
chr12:57751297|57751578 hsa-miR-4640-5p 1 0 0
chr12:57751297|57751578 hsa-miR-1228-5p 1 0 0
chr12:57751297|57751578 hsa-let-7b-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6823-5p 1 0 0
chr12:57751297|57751578 hsa-miR-4713-3p 1 0 0
chr12:57751297|57751578 hsa-miR-6717-5p 1 0 0
chr12:57751297|57751578 hsa-miR-3162-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6802-5p 1 1 0
chr12:57751297|57751578 hsa-miR-5010-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6864-5p 0 1 0
chr12:57751297|57751578 hsa-miR-423-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6889-3p 0 1 0
chr12:57751297|57751578 hsa-miR-598-5p 1 0 0
chr12:57751297|57751578 hsa-miR-3144-5p 0 1 0
chr12:57751297|57751578 hsa-miR-3617-3p 0 1 0
chr12:57751297|57751578 hsa-miR-10400-5p 1 0 0
chr12:57751297|57751578 hsa-miR-1233-5p 1 0 0
chr12:57751297|57751578 hsa-miR-1273h-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6769b-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6778-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6787-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6812-5p 1 1 0
chr12:57751297|57751578 hsa-miR-6865-5p 1 1 0
chr12:57751297|57751578 hsa-miR-1343-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6737-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6752-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6756-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6769a-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6803-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6819-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6842-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6851-5p 1 0 0
chr12:57751297|57751578 hsa-miR-7110-5p 1 0 0
chr12:57751297|57751578 hsa-miR-10401-5p 1 0 0
chr12:57751297|57751578 hsa-miR-11181-3p 1 0 0
chr12:57751297|57751578 hsa-miR-1249-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6751-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6763-5p 1 1 0
chr12:57751297|57751578 hsa-miR-6779-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6797-5p 1 0 0
chr12:57751297|57751578 hsa-miR-7111-5p 1 0 0
chr12:57751297|57751578 hsa-miR-3620-5p 1 0 0
chr12:57751297|57751578 hsa-miR-5196-5p 1 1 0
chr12:57751297|57751578 hsa-miR-6780b-5p 1 0 0
chr12:57751297|57751578 hsa-miR-10526-3p 1 1 0
chr12:57751297|57751578 hsa-miR-328-5p 1 0 0
chr12:57751297|57751578 hsa-miR-4649-5p 1 0 0
chr12:57751297|57751578 hsa-miR-4725-3p 1 0 0
chr12:57751297|57751578 hsa-miR-4745-5p 1 0 0
chr12:57751297|57751578 hsa-miR-4749-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6729-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6777-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6794-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6795-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6846-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6848-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6858-5p 1 1 0
chr12:57751297|57751578 hsa-miR-6883-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6887-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6889-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6845-5p 1 0 0
chr12:57751297|57751578 hsa-miR-4758-5p 1 0 0
chr12:57751297|57751578 hsa-miR-4769-5p 1 0 0
chr12:57751297|57751578 hsa-miR-3940-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6736-5p 1 0 0
chr12:57751297|57751578 hsa-miR-3679-5p 1 0 0
chr12:57751297|57751578 hsa-miR-4646-5p 1 0 0
chr12:57751297|57751578 hsa-miR-4472 1 0 0
chr12:57751297|57751578 hsa-miR-4716-3p 1 0 0
chr12:57751297|57751578 hsa-miR-6766-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6785-5p 1 0 0
chr12:57751297|57751578 hsa-miR-4667-5p 1 1 0
chr12:57751297|57751578 hsa-miR-3184-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6790-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6791-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6762-5p 1 0 0
chr12:57751297|57751578 hsa-miR-323b-5p 1 0 0
chr12:57751297|57751578 hsa-miR-6824-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr12:57751297|57751578
ORF Type ORF1
Protein Length 81
Nucleotide Length 246
Protein Sequence LISRSVRDVAQTSISLTRVNAHFSIPFNPTWPLIISSGSPLLYRSSHPTYRLSFPFTPHAQPSTTFSPDNIGMLKSLQSPQ
Nucleotide Sequence TTGATCTCCCGGTCAGTTCGGGATGTGGCACAGACGTCCATCAGCCTGACCAGAGTAAATGCTCACTTTTCAATCCCCTTTAACCCAACATGGCCTCTCATTATTTCCTCAGGGTCCCCACTTCTCTACAGATCATCACACCCCACCTATAGGCTGTCTTTTCCCTTTACTCCCCACGCCCAACCCTCCACCACCTTCTCACCGGACAACATTGGGATGCTCAAAAGCCTCCAGTCGCCTCAGTAA
CircID chr12:57751297|57751578
ORF Type ORF2
Protein Length 74
Nucleotide Length 222
Protein Sequence MLTFQSPLTQHGLSLFPQGPHFSTDHHTPPIGCLFPLLPTPNPPPPSHRTTLGCSKASSRLSKATSRTVLMGRP
Nucleotide Sequence ATGCTCACTTTTCAATCCCCTTTAACCCAACATGGCCTCTCATTATTTCCTCAGGGTCCCCACTTCTCTACAGATCATCACACCCCACCTATAGGCTGTCTTTTCCCTTTACTCCCCACGCCCAACCCTCCACCACCTTCTCACCGGACAACATTGGGATGCTCAAAAGCCTCCAGTCGCCTCAGTAAAGCCACCTCACGAACTGTGCTGATGGGAAGGCCT
CircID chr12:57751297|57751578
ORF Type ORF3
Protein Length 25
Nucleotide Length 78
Protein Sequence MSIPMLSGEKVVEGWAWGVKGKDSL
Nucleotide Sequence TTGAGCATCCCAATGTTGTCCGGTGAGAAGGTGGTGGAGGGTTGGGCGTGGGGAGTAAAGGGAAAAGACAGCCTATAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab