CircRNA Information

General Information
circRNA Basic Information
CircID chr12:57823626|57823966
Strand +
CircType exon
Host Gene ENSG00000175215.8;
Algorism CIRI2;
Sequence CTGAGAAAGACCCTCATCCTGGACAACTCGCCTGCTTCTTACATATTCCACCCCGAGAATGCAGTGAGTGCTCCTGATGCGTCTCCACGGTAGGGATTGGGAGAGGAAGCAGACTGGAACTGTGGGCTCCACCAGAGAAGTACACCCCTCCAGGAAGACCCAGCCACCCTCTAGGGCTCTGGGGCGAGGGAGGGGGAAGCAGCAGTCGGGAGATTGACACCACATCTTCCCCCCACCAGGTGCCTGTGCAGTCCTGGTTTGATGACATGGCAGACACTGAGTTGCTGAACCTGATCCCAATCTTTGAGGAGCTGAGCGGAGCAGAGGACGTCTACACCAGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:57823626|57823966 hsa-miR-198 0 0 1
chr12:57823626|57823966 hsa-miR-217-5p 0 0 1
chr12:57823626|57823966 hsa-miR-217-3p 0 0 1
chr12:57823626|57823966 hsa-miR-150-5p 0 0 1
chr12:57823626|57823966 hsa-miR-150-3p 0 0 1
chr12:57823626|57823966 hsa-miR-380-5p 0 0 1
chr12:57823626|57823966 hsa-miR-380-3p 0 0 1
chr12:57823626|57823966 hsa-miR-326 0 0 1
chr12:57823626|57823966 hsa-miR-346 0 0 1
chr12:57823626|57823966 hsa-miR-545-5p 0 0 1
chr12:57823626|57823966 hsa-miR-545-3p 0 0 1
chr12:57823626|57823966 hsa-miR-572 0 1 1
chr12:57823626|57823966 hsa-miR-608 0 1 1
chr12:57823626|57823966 hsa-miR-622 0 0 1
chr12:57823626|57823966 hsa-miR-625-5p 0 0 1
chr12:57823626|57823966 hsa-miR-625-3p 0 0 1
chr12:57823626|57823966 hsa-miR-632 0 0 1
chr12:57823626|57823966 hsa-miR-638 1 0 1
chr12:57823626|57823966 hsa-miR-541-5p 0 0 1
chr12:57823626|57823966 hsa-miR-541-3p 0 0 1
chr12:57823626|57823966 hsa-miR-665 0 0 1
chr12:57823626|57823966 hsa-miR-942-5p 0 0 1
chr12:57823626|57823966 hsa-miR-942-3p 0 0 1
chr12:57823626|57823966 hsa-miR-1182 1 1 1
chr12:57823626|57823966 hsa-miR-1255a 0 0 1
chr12:57823626|57823966 hsa-miR-1288-5p 0 0 1
chr12:57823626|57823966 hsa-miR-1288-3p 0 0 1
chr12:57823626|57823966 hsa-miR-139-3p 0 0 1
chr12:57823626|57823966 hsa-miR-145-5p 0 0 1
chr12:57823626|57823966 hsa-miR-532-3p 0 0 1
chr12:57823626|57823966 hsa-miR-193a-5p 0 1 1
chr12:57823626|57823966 hsa-miR-654-5p 0 0 1
chr12:57823626|57823966 hsa-miR-767-3p 0 0 1
chr12:57823626|57823966 hsa-miR-576-3p 0 0 1
chr12:57823626|57823966 hsa-miR-769-3p 0 0 1
chr12:57823626|57823966 hsa-miR-330-5p 0 0 1
chr12:57823626|57823966 hsa-miR-450b-3p 0 0 1
chr12:57823626|57823966 hsa-miR-516a-3p 0 1 1
chr12:57823626|57823966 hsa-miR-1233 0 0 1
chr12:57823626|57823966 hsa-miR-1255b 0 0 1
chr12:57823626|57823966 hsa-miR-138 0 0 1
chr12:57823626|57823966 hsa-miR-663a 1 0 0
chr12:57823626|57823966 hsa-miR-3169 0 1 0
chr12:57823626|57823966 hsa-miR-4271 0 1 0
chr12:57823626|57823966 hsa-miR-3615 1 0 0
chr12:57823626|57823966 hsa-miR-4651 1 1 0
chr12:57823626|57823966 hsa-miR-4730 1 0 0
chr12:57823626|57823966 hsa-miR-5572 1 0 0
chr12:57823626|57823966 hsa-miR-7978 0 1 0
chr12:57823626|57823966 hsa-miR-92a-1-5p 1 1 0
chr12:57823626|57823966 hsa-miR-215-3p 0 1 0
chr12:57823626|57823966 hsa-miR-6861-5p 1 0 0
chr12:57823626|57823966 hsa-miR-6825-5p 1 1 0
chr12:57823626|57823966 hsa-miR-6892-3p 0 1 0
chr12:57823626|57823966 hsa-miR-6881-3p 0 1 0
chr12:57823626|57823966 hsa-miR-6833-5p 0 1 0
chr12:57823626|57823966 hsa-miR-4786-5p 1 0 0
chr12:57823626|57823966 hsa-miR-6880-5p 0 1 0
chr12:57823626|57823966 hsa-miR-6762-3p 0 1 0
chr12:57823626|57823966 hsa-miR-6727-5p 1 0 0
chr12:57823626|57823966 hsa-miR-3187-3p 1 0 0
chr12:57823626|57823966 hsa-miR-5589-5p 0 1 0
chr12:57823626|57823966 hsa-miR-1292-5p 1 0 0
chr12:57823626|57823966 hsa-miR-6782-5p 1 1 0
chr12:57823626|57823966 hsa-miR-6715b-3p 0 1 0
chr12:57823626|57823966 hsa-miR-6728-3p 1 1 0
chr12:57823626|57823966 hsa-miR-6810-5p 1 0 0
chr12:57823626|57823966 hsa-miR-7109-5p 1 1 0
chr12:57823626|57823966 hsa-miR-4640-5p 1 0 0
chr12:57823626|57823966 hsa-miR-6803-3p 0 1 0
chr12:57823626|57823966 hsa-miR-3667-3p 0 1 0
chr12:57823626|57823966 hsa-miR-4690-5p 1 1 0
chr12:57823626|57823966 hsa-miR-7111-3p 0 1 0
chr12:57823626|57823966 hsa-miR-6780a-3p 0 1 0
chr12:57823626|57823966 hsa-miR-1304-3p 0 1 0
chr12:57823626|57823966 hsa-miR-6736-3p 0 1 0
chr12:57823626|57823966 hsa-miR-584-3p 0 1 0
chr12:57823626|57823966 hsa-miR-6828-3p 0 1 0
chr12:57823626|57823966 hsa-miR-6887-3p 0 1 0
chr12:57823626|57823966 hsa-miR-6715a-3p 0 1 0
chr12:57823626|57823966 hsa-miR-3670 1 0 0
chr12:57823626|57823966 hsa-miR-6733-3p 0 1 0
chr12:57823626|57823966 hsa-miR-7844-5p 1 1 0
chr12:57823626|57823966 hsa-miR-6885-3p 0 1 0
chr12:57823626|57823966 hsa-miR-6812-5p 1 1 0
chr12:57823626|57823966 hsa-miR-6870-5p 1 0 0
chr12:57823626|57823966 hsa-miR-6737-5p 1 0 0
chr12:57823626|57823966 hsa-miR-6756-5p 1 0 0
chr12:57823626|57823966 hsa-miR-6803-5p 1 0 0
chr12:57823626|57823966 hsa-miR-6819-5p 1 0 0
chr12:57823626|57823966 hsa-miR-6751-5p 1 1 0
chr12:57823626|57823966 hsa-miR-6852-3p 0 1 0
chr12:57823626|57823966 hsa-miR-6780b-5p 0 1 0
chr12:57823626|57823966 hsa-miR-10396b-5p 1 0 0
chr12:57823626|57823966 hsa-miR-4649-5p 1 0 0
chr12:57823626|57823966 hsa-miR-4685-5p 1 1 0
chr12:57823626|57823966 hsa-miR-4725-3p 0 1 0
chr12:57823626|57823966 hsa-miR-6795-5p 1 1 0
chr12:57823626|57823966 hsa-miR-6887-5p 1 1 0
chr12:57823626|57823966 hsa-miR-10396a-3p 1 0 0
chr12:57823626|57823966 hsa-miR-1271-3p 1 0 0
chr12:57823626|57823966 hsa-miR-4472 0 1 0
chr12:57823626|57823966 hsa-miR-6893-3p 0 1 0
chr12:57823626|57823966 hsa-miR-6810-3p 1 0 0
chr12:57823626|57823966 hsa-miR-3059-5p 0 1 0
chr12:57823626|57823966 hsa-miR-4768-5p 0 1 0
chr12:57823626|57823966 hsa-miR-323b-5p 0 1 0
chr12:57823626|57823966 hsa-miR-6817-5p 0 1 0
chr12:57823626|57823966 hsa-miR-6715b-5p 0 1 0
chr12:57823626|57823966 hsa-miR-6807-3p 0 1 0
chr12:57823626|57823966 hsa-miR-410-5p 0 1 0
chr12:57823626|57823966 hsa-miR-7162-5p 0 1 0
chr12:57823626|57823966 hsa-miR-1-3p 0 1 0
chr12:57823626|57823966 hsa-miR-516b-3p 0 1 0
chr12:57823626|57823966 hsa-miR-4659a-5p 0 1 0
chr12:57823626|57823966 hsa-miR-4659b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr12:57823626|57823966
ORF Type ORF1
Protein Length 30
Nucleotide Length 93
Protein Sequence LRKTLILDNSPASYIFHPENAVSAPDASPR
Nucleotide Sequence CTGAGAAAGACCCTCATCCTGGACAACTCGCCTGCTTCTTACATATTCCACCCCGAGAATGCAGTGAGTGCTCCTGATGCGTCTCCACGGTAG

CircID chr12:57823626|57823966
ORF Type ORF2
Protein Length 25
Nucleotide Length 78
Protein Sequence MGEEADWNCGLHQRSTPLQEDPATL
Nucleotide Sequence TTGGGAGAGGAAGCAGACTGGAACTGTGGGCTCCACCAGAGAAGTACACCCCTCCAGGAAGACCCAGCCACCCTCTAG

CircID chr12:57823626|57823966
ORF Type ORF3
Protein Length 47
Nucleotide Length 144
Protein Sequence MMRLHGRDWERKQTGTVGSTREVHPSRKTQPPSRALGRGRGKQQSGD
Nucleotide Sequence CTGATGCGTCTCCACGGTAGGGATTGGGAGAGGAAGCAGACTGGAACTGTGGGCTCCACCAGAGAAGTACACCCCTCCAGGAAGACCCAGCCACCCTCTAGGGCTCTGGGGCGAGGGAGGGGGAAGCAGCAGTCGGGAGATTGA

CircID chr12:57823626|57823966
ORF Type ORF4
Protein Length 76
Nucleotide Length 228
Protein Sequence MELWAPPEKYTPPGRPSHPLGLWGEGGGSSSREIDTTSSPHQVPVQSWFDDMADTELLNLIPIFEELSGAEDVYTS
Nucleotide Sequence CTGGAACTGTGGGCTCCACCAGAGAAGTACACCCCTCCAGGAAGACCCAGCCACCCTCTAGGGCTCTGGGGCGAGGGAGGGGGAAGCAGCAGTCGGGAGATTGACACCACATCTTCCCCCCACCAGGTGCCTGTGCAGTCCTGGTTTGATGACATGGCAGACACTGAGTTGCTGAACCTGATCCCAATCTTTGAGGAGCTGAGCGGAGCAGAGGACGTCTACACCAGC

CircID chr12:57823626|57823966
ORF Type ORF5
Protein Length 26
Nucleotide Length 81
Protein Sequence MHRHLVGGRCGVNLPTAASPSLAPEP
Nucleotide Sequence CTGCACAGGCACCTGGTGGGGGGAAGATGTGGTGTCAATCTCCCGACTGCTGCTTCCCCCTCCCTCGCCCCAGAGCCCTAG

CircID chr12:57823626|57823966
ORF Type ORF6
Protein Length 84
Nucleotide Length 255
Protein Sequence MSSNQDCTGTWWGEDVVSISRLLLPPPSPQSPRGWLGLPGGVYFSGGAHSSSLLPLPIPTVETHQEHSLHSRGGICKKQASCPG
Nucleotide Sequence ATGTCATCAAACCAGGACTGCACAGGCACCTGGTGGGGGGAAGATGTGGTGTCAATCTCCCGACTGCTGCTTCCCCCTCCCTCGCCCCAGAGCCCTAGAGGGTGGCTGGGTCTTCCTGGAGGGGTGTACTTCTCTGGTGGAGCCCACAGTTCCAGTCTGCTTCCTCTCCCAATCCCTACCGTGGAGACGCATCAGGAGCACTCACTGCATTCTCGGGGTGGAATATGTAAGAAGCAGGCGAGTTGTCCAGGATGA

CircID chr12:57823626|57823966
ORF Type ORF7
Protein Length 108
Nucleotide Length 324
Protein Sequence MLRSAPQRLGSGSATQCLPCHQTRTAQAPGGGKMWCQSPDCCFPLPRPRALEGGWVFLEGCTSLVEPTVPVCFLSQSLPWRRIRSTHCILGVEYVRSRRVVQDEGLSQ
Nucleotide Sequence CTGCTCCGCTCAGCTCCTCAAAGATTGGGATCAGGTTCAGCAACTCAGTGTCTGCCATGTCATCAAACCAGGACTGCACAGGCACCTGGTGGGGGGAAGATGTGGTGTCAATCTCCCGACTGCTGCTTCCCCCTCCCTCGCCCCAGAGCCCTAGAGGGTGGCTGGGTCTTCCTGGAGGGGTGTACTTCTCTGGTGGAGCCCACAGTTCCAGTCTGCTTCCTCTCCCAATCCCTACCGTGGAGACGCATCAGGAGCACTCACTGCATTCTCGGGGTGGAATATGTAAGAAGCAGGCGAGTTGTCCAGGATGAGGGTCTTTCTCAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites