CircNet

General Information

circRNA Basic Information

CircID	chr12:58913982\|58914336
Strand	-
CircType	exon
Host Gene	ENSG00000139263.11;
Algorism	find_circ;CIRI2;CIRC
Sequence	GGACTTAAGTCACAACAGATTATCTTTCATCAAGGCAAGTTCCATGAGCCACCTTCAAAGCCTTCGAGAAGTGAAACTGAACAACAATGAATTGGAGACCATTCCAAATCTGGGACCAGTCTCGGCAAATATTACACTTCTCTCCTT

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr12:58913982\|58914336	hsa-miR-96-5p	0	0	1
chr12:58913982\|58914336	hsa-miR-96-3p	0	0	1
chr12:58913982\|58914336	hsa-miR-182-5p	0	0	1
chr12:58913982\|58914336	hsa-miR-182-3p	0	0	1
chr12:58913982\|58914336	hsa-miR-224-5p	0	0	1
chr12:58913982\|58914336	hsa-miR-224-3p	0	0	1
chr12:58913982\|58914336	hsa-miR-380-5p	0	0	1
chr12:58913982\|58914336	hsa-miR-380-3p	0	0	1
chr12:58913982\|58914336	hsa-miR-561-5p	0	0	1
chr12:58913982\|58914336	hsa-miR-561-3p	0	0	1
chr12:58913982\|58914336	hsa-miR-595	0	0	1
chr12:58913982\|58914336	hsa-miR-620	0	0	1
chr12:58913982\|58914336	hsa-miR-627-5p	0	0	1
chr12:58913982\|58914336	hsa-miR-627-3p	0	0	1
chr12:58913982\|58914336	hsa-miR-1323	0	0	1
chr12:58913982\|58914336	hsa-miR-1271-5p	0	0	1
chr12:58913982\|58914336	hsa-miR-1271-3p	0	0	1
chr12:58913982\|58914336	hsa-miR-890	0	0	1
chr12:58913982\|58914336	hsa-miR-921	0	0	1
chr12:58913982\|58914336	hsa-miR-924	0	0	1
chr12:58913982\|58914336	hsa-miR-942-5p	0	0	1
chr12:58913982\|58914336	hsa-miR-942-3p	0	0	1
chr12:58913982\|58914336	hsa-miR-1293	1	1	1
chr12:58913982\|58914336	hsa-miR-1256	0	0	1
chr12:58913982\|58914336	hsa-miR-1257	0	0	1
chr12:58913982\|58914336	hsa-miR-1262	0	0	1
chr12:58913982\|58914336	hsa-miR-548o-3p	0	0	1
chr12:58913982\|58914336	hsa-miR-1270	0	0	1
chr12:58913982\|58914336	hsa-miR-1307-5p	0	0	1
chr12:58913982\|58914336	hsa-miR-1307-3p	0	0	1
chr12:58913982\|58914336	hsa-miR-548o	0	0	1
chr12:58913982\|58914336	hsa-miR-129-5p	0	0	1
chr12:58913982\|58914336	hsa-miR-330-3p	0	0	1
chr12:58913982\|58914336	hsa-miR-219-2-3p	0	0	1
chr12:58913982\|58914336	hsa-miR-203	0	0	1
chr12:58913982\|58914336	hsa-miR-451	0	0	1
chr12:58913982\|58914336	hsa-miR-608	1	0	0
chr12:58913982\|58914336	hsa-miR-3174	0	1	0
chr12:58913982\|58914336	hsa-miR-4483	0	1	0
chr12:58913982\|58914336	hsa-miR-4496	0	1	0
chr12:58913982\|58914336	hsa-miR-4748	0	1	0
chr12:58913982\|58914336	hsa-miR-6073	0	1	0
chr12:58913982\|58914336	hsa-miR-6081	1	0	0
chr12:58913982\|58914336	hsa-miR-8089	1	0	0
chr12:58913982\|58914336	hsa-miR-1227-5p	1	0	0
chr12:58913982\|58914336	hsa-miR-1292-5p	1	0	0
chr12:58913982\|58914336	hsa-miR-6810-5p	1	0	0
chr12:58913982\|58914336	hsa-miR-4776-5p	1	0	0
chr12:58913982\|58914336	hsa-miR-4724-5p	0	1	0
chr12:58913982\|58914336	hsa-miR-4727-3p	1	0	0
chr12:58913982\|58914336	hsa-miR-3614-3p	0	1	0
chr12:58913982\|58914336	hsa-miR-4762-5p	0	1	0
chr12:58913982\|58914336	hsa-miR-6756-5p	1	0	0
chr12:58913982\|58914336	hsa-miR-10399-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr12:58913982\|58914336
ORF Type	ORF1
Protein Length	34
Nucleotide Length	102
Protein Sequence	MSHLQSLREVKLNNNELETIPNLGPVSANITLLS
Nucleotide Sequence	ATGAGCCACCTTCAAAGCCTTCGAGAAGTGAAACTGAACAACAATGAATTGGAGACCATTCCAAATCTGGGACCAGTCTCGGCAAATATTACACTTCTCTCC

CircID	chr12:58913982\|58914336
ORF Type	ORF1
Protein Length	33
Nucleotide Length	102
Protein Sequence	MPRLVPDLEWSPIHCCSVSYKCQKKKEKEKLIR
Nucleotide Sequence	TTGCCGAGACTGGTCCCAGATTTGGAATGGTCTCCAATTCATTGTTGTTCAGTTTCCTACAAATGCCAAAAAAAAAAAGAAAAAGAAAAGCTGATTAGGTAA

CircID	chr12:58913982\|58914336
ORF Type	ORF2
Protein Length	31
Nucleotide Length	96
Protein Sequence	MSKIRYPLYYLTVRNTWIIVSYSKLLTWVVS
Nucleotide Sequence	TTGAGTAAAATACGTTACCCCTTATACTATTTAACCGTAAGGAATACTTGGATTATAGTGAGTTATTCAAAACTTTTAACTTGGGTGGTATCTTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr12:58913982\|58914336	ELAVL1	4	1	0
chr12:58913982\|58914336	HNRNPA1	2	4	0
chr12:58913982\|58914336	BUD13	0	0	2
chr12:58913982\|58914336	NOP58	3	3	1
chr12:58913982\|58914336	MSI1	2	1	0
chr12:58913982\|58914336	U2AF2	4	2	1
chr12:58913982\|58914336	NOP56	3	3	0
chr12:58913982\|58914336	DDX54	0	0	1
chr12:58913982\|58914336	HNRNPUL1	0	1	0
chr12:58913982\|58914336	FUS	0	2	0
chr12:58913982\|58914336	PRPF8	0	1	0
chr12:58913982\|58914336	RBM10	0	1	0
chr12:58913982\|58914336	HNRNPL	0	1	0
chr12:58913982\|58914336	FTO	1	0	0
chr12:58913982\|58914336	DKC1	0	1	0
chr12:58913982\|58914336	MOV10	0	1	0
chr12:58913982\|58914336	PTBP1	0	1	0
chr12:58913982\|58914336	IGF2BP2	1	2	0
chr12:58913982\|58914336	EIF4A3	0	2	1
chr12:58913982\|58914336	FBL	2	0	1

CircRNA Information