CircNet

General Information

circRNA Basic Information

CircID	chr12:62524515\|62532670
Strand	+
CircType	exon
Host Gene	ENSG00000061987.14;
Algorism	find_circ;CIRI2;DCC;
Sequence	GTAACTGAATGTGAGATATTTCTGTCACTTCTGGTGAAATTTCTGGATGCAGATAAACCACAGTGGCTACGAGCTGTTGCGGTGGAATCAATACACAGATTCTGTGTGCAGCCTCAACTATTAAGGTCATTTTGTCAGTCCTATGATATGAAACAGCATTCTACCAAGGTTTTTCGTGATATTGTAAATGCACTGGGATCTTTTATACAGTCCTTGTTTCTTGTCCCCCCTACTGGAAATCCTGCAACAAGCAACCAAGCTGCTTAGAAATGTTGGACAAAGTTGAGCCTCCAACTATACCTGAAGGTTACGCCATGTCTGTGGCATTCCATTGTTTGCTAGACCTTGTTCGTGGAATCACAAGTATGATTGAAGGAGAGCTAGGAGAGCTTGAAACAGAATGTCAAACCACCACTGAAGAAGGTTCTTCACCAACACAGTCGACAGAACAGCAGGATTTACAGTCAACATCAGACCAAATGGATAAGGAAATTG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr12:62524515\|62532670
ORF Type	ORF1
Protein Length	75
Nucleotide Length	225
Protein Sequence	MLDKVEPPTIPEGYAMSVAFHCLLDLVRGITSMIEGELGELETECQTTTEEGSSPTQSTEQQDLQSTSDQMDKEI
Nucleotide Sequence	ATGTTGGACAAAGTTGAGCCTCCAACTATACCTGAAGGTTACGCCATGTCTGTGGCATTCCATTGTTTGCTAGACCTTGTTCGTGGAATCACAAGTATGATTGAAGGAGAGCTAGGAGAGCTTGAAACAGAATGTCAAACCACCACTGAAGAAGGTTCTTCACCAACACAGTCGACAGAACAGCAGGATTTACAGTCAACATCAGACCAAATGGATAAGGAAATT

CircID	chr12:62524515\|62532670
ORF Type	ORF2
Protein Length	43
Nucleotide Length	129
Protein Sequence	MTLIVEAAHRICVLIPPQQLVATVVYLHPEISPEVTEISHIQL
Nucleotide Sequence	ATGACCTTAATAGTTGAGGCTGCACACAGAATCTGTGTATTGATTCCACCGCAACAGCTCGTAGCCACTGTGGTTTATCTGCATCCAGAAATTTCACCAGAAGTGACAGAAATATCTCACATTCAGTTA

CircID	chr12:62524515\|62532670
ORF Type	ORF3
Protein Length	40
Nucleotide Length	120
Protein Sequence	MKQHSTKVFRDIVNALGSFIQSLFLVPPTGNPATSNQAA*
Nucleotide Sequence	ATGAAACAGCATTCTACCAAGGTTTTTCGTGATATTGTAAATGCACTGGGATCTTTTATACAGTCCTTGTTTCTTGTCCCCCCTACTGGAAATCCTGCAACAAGCAACCAAGCTGCTTAG

CircID	chr12:62524515\|62532670
ORF Type	ORF4
Protein Length	38
Nucleotide Length	114
Protein Sequence	MLTVNPAVLSTVLVKNLLQWWFDILFQALLALLQSYL*
Nucleotide Sequence	ATGTTGACTGTAAATCCTGCTGTTCTGTCGACTGTGTTGGTGAAGAACCTTCTTCAGTGGTGGTTTGACATTCTGTTTCAAGCTCTCCTAGCTCTCCTTCAATCATACTTGTGA

CircID	chr12:62524515\|62532670
ORF Type	ORF5
Protein Length	33
Nucleotide Length	99
Protein Sequence	MHWDLLYSPCFLSPLLEILQQATKLLRNVGQS*
Nucleotide Sequence	ATGCACTGGGATCTTTTATACAGTCCTTGTTTCTTGTCCCCCCTACTGGAAATCCTGCAACAAGCAACCAAGCTGCTTAGAAATGTTGGACAAAGTTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr12:62524515\|62532670	U2AF2	17	6	4
chr12:62524515\|62532670	ELAVL1	4	7	0
chr12:62524515\|62532670	ELAVL3	0	1	0
chr12:62524515\|62532670	CELF2	0	2	0
chr12:62524515\|62532670	TNRC6A	0	0	1
chr12:62524515\|62532670	FMR1	0	0	3
chr12:62524515\|62532670	FUS	3	0	0
chr12:62524515\|62532670	GNL3	1	0	0
chr12:62524515\|62532670	SRSF1	0	0	1
chr12:62524515\|62532670	NOP58	0	2	3
chr12:62524515\|62532670	U2AF1	2	0	0
chr12:62524515\|62532670	NOP56	1	1	1
chr12:62524515\|62532670	SRSF9	0	0	3
chr12:62524515\|62532670	DDX54	3	1	14
chr12:62524515\|62532670	RBM10	4	1	0
chr12:62524515\|62532670	PTBP1	2	0	1
chr12:62524515\|62532670	HNRNPC	3	6	0
chr12:62524515\|62532670	TRA2A	0	0	3
chr12:62524515\|62532670	HNRNPA1	1	0	0
chr12:62524515\|62532670	DDX3X	1	0	1
chr12:62524515\|62532670	KHSRP	2	0	0
chr12:62524515\|62532670	ACIN1	1	0	1
chr12:62524515\|62532670	LIN28B	0	0	7
chr12:62524515\|62532670	RANGAP1	0	0	1
chr12:62524515\|62532670	FXR1	0	0	1
chr12:62524515\|62532670	FXR2	0	0	1
chr12:62524515\|62532670	IGF2BP1	0	0	4
chr12:62524515\|62532670	BUD13	0	0	3
chr12:62524515\|62532670	IGF2BP2	1	2	5
chr12:62524515\|62532670	TARDBP	0	2	0
chr12:62524515\|62532670	TAF15	1	0	0
chr12:62524515\|62532670	GTF2F1	0	0	1
chr12:62524515\|62532670	RBFOX2	0	0	1
chr12:62524515\|62532670	RBM47	0	0	1
chr12:62524515\|62532670	EIF4G2	0	0	2
chr12:62524515\|62532670	CSTF2T	0	2	2
chr12:62524515\|62532670	CSTF2	3	2	0
chr12:62524515\|62532670	RBM22	0	2	0
chr12:62524515\|62532670	TIAL1	0	1	0
chr12:62524515\|62532670	AGO2	0	0	1
chr12:62524515\|62532670	EIF4A3	2	2	6
chr12:62524515\|62532670	FBL	0	1	2

CircRNA Information