CircRNA Information

General Information
circRNA Basic Information
CircID chr12:6333811|6334173
Strand -
CircType exon
Host Gene ENSG00000067182.6;
Algorism CIRI2;
Sequence TCCCTGCAGTCCGTATCCTGCCCCGGGCCTGGACAGTCATTGTACAAGTAGGTTCCTGTGAATGGGGCCGCAGAGTTAGGCTGCGGGTGAGAACACAAGGAAGGAGCCCCATGCTAGGGACAACAGCCAGGGCCGATTCCCTGAAGTCTCTAGGAGAGGAGGGAGGGAGAAAATCCCAGCCCAGGAGAGACAGCAAAGTTAGGGAAGAACAACTGGAAGAAGCAGAGAAAGAAGCAGCACCCCAGACCTGAGGGCATTCACCGTTTCCACTTGCCCCTACCTTTGTGGCACTTGGTACAGCAAATCGAATTATTTTGAGGGTGGATATATTTTCCTTGGGGACACACACTATCTCTCTTCTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:6333811|6334173 hsa-miR-27a-5p 0 0 1
chr12:6333811|6334173 hsa-miR-27a-3p 0 0 1
chr12:6333811|6334173 hsa-miR-198 0 0 1
chr12:6333811|6334173 hsa-miR-27b-5p 0 0 1
chr12:6333811|6334173 hsa-miR-27b-3p 0 0 1
chr12:6333811|6334173 hsa-miR-553 0 1 1
chr12:6333811|6334173 hsa-miR-581 0 1 1
chr12:6333811|6334173 hsa-miR-593-5p 0 0 1
chr12:6333811|6334173 hsa-miR-593-3p 0 0 1
chr12:6333811|6334173 hsa-miR-608 1 0 1
chr12:6333811|6334173 hsa-miR-618 0 0 1
chr12:6333811|6334173 hsa-miR-626 0 0 1
chr12:6333811|6334173 hsa-miR-637 1 0 1
chr12:6333811|6334173 hsa-miR-648 0 0 1
chr12:6333811|6334173 hsa-miR-873-5p 0 0 1
chr12:6333811|6334173 hsa-miR-873-3p 0 0 1
chr12:6333811|6334173 hsa-miR-943 0 0 1
chr12:6333811|6334173 hsa-miR-1227-5p 0 0 1
chr12:6333811|6334173 hsa-miR-1227-3p 0 0 1
chr12:6333811|6334173 hsa-miR-1229-5p 0 0 1
chr12:6333811|6334173 hsa-miR-1229-3p 0 0 1
chr12:6333811|6334173 hsa-miR-1205 0 0 1
chr12:6333811|6334173 hsa-miR-1290 0 0 1
chr12:6333811|6334173 hsa-miR-1291 0 1 1
chr12:6333811|6334173 hsa-miR-1253 0 0 1
chr12:6333811|6334173 hsa-miR-1257 0 0 1
chr12:6333811|6334173 hsa-miR-548m 0 0 1
chr12:6333811|6334173 hsa-miR-1288-5p 0 0 1
chr12:6333811|6334173 hsa-miR-1288-3p 0 0 1
chr12:6333811|6334173 hsa-miR-145-5p 0 0 1
chr12:6333811|6334173 hsa-miR-486-3p 0 0 1
chr12:6333811|6334173 hsa-miR-502-5p 0 0 1
chr12:6333811|6334173 hsa-miR-513a-5p 0 0 1
chr12:6333811|6334173 hsa-miR-342-5p 0 0 1
chr12:6333811|6334173 hsa-miR-509-3-5p 0 0 1
chr12:6333811|6334173 hsa-miR-509-5p 0 0 1
chr12:6333811|6334173 hsa-miR-220c 0 0 1
chr12:6333811|6334173 hsa-miR-365 0 0 1
chr12:6333811|6334173 hsa-miR-326 1 0 0
chr12:6333811|6334173 hsa-miR-612 1 0 0
chr12:6333811|6334173 hsa-miR-765 0 1 0
chr12:6333811|6334173 hsa-miR-1248 0 1 0
chr12:6333811|6334173 hsa-miR-1538 1 0 0
chr12:6333811|6334173 hsa-miR-378g 0 1 0
chr12:6333811|6334173 hsa-miR-1587 0 1 0
chr12:6333811|6334173 hsa-miR-4688 0 1 0
chr12:6333811|6334173 hsa-miR-4710 1 0 0
chr12:6333811|6334173 hsa-miR-4718 0 1 0
chr12:6333811|6334173 hsa-miR-4741 1 0 0
chr12:6333811|6334173 hsa-miR-4788 0 1 0
chr12:6333811|6334173 hsa-miR-5090 1 1 0
chr12:6333811|6334173 hsa-miR-5193 0 1 0
chr12:6333811|6334173 hsa-miR-5572 1 0 0
chr12:6333811|6334173 hsa-miR-7974 1 0 0
chr12:6333811|6334173 hsa-miR-8078 1 1 0
chr12:6333811|6334173 hsa-miR-11399 1 1 0
chr12:6333811|6334173 hsa-miR-12121 0 1 0
chr12:6333811|6334173 hsa-miR-211-3p 1 0 0
chr12:6333811|6334173 hsa-miR-4747-3p 0 1 0
chr12:6333811|6334173 hsa-miR-18a-3p 1 0 0
chr12:6333811|6334173 hsa-miR-6867-5p 0 1 0
chr12:6333811|6334173 hsa-miR-3064-5p 0 1 0
chr12:6333811|6334173 hsa-miR-874-5p 0 1 0
chr12:6333811|6334173 hsa-miR-6875-3p 1 0 0
chr12:6333811|6334173 hsa-miR-6762-3p 1 0 0
chr12:6333811|6334173 hsa-miR-6727-5p 1 0 0
chr12:6333811|6334173 hsa-miR-6721-5p 0 1 0
chr12:6333811|6334173 hsa-miR-6873-3p 0 1 0
chr12:6333811|6334173 hsa-miR-7110-3p 0 1 0
chr12:6333811|6334173 hsa-miR-6768-5p 1 0 0
chr12:6333811|6334173 hsa-miR-185-3p 1 0 0
chr12:6333811|6334173 hsa-miR-1909-5p 1 0 0
chr12:6333811|6334173 hsa-miR-3944-3p 1 0 0
chr12:6333811|6334173 hsa-miR-3667-3p 0 1 0
chr12:6333811|6334173 hsa-miR-889-5p 0 1 0
chr12:6333811|6334173 hsa-miR-7111-3p 1 0 0
chr12:6333811|6334173 hsa-miR-6789-5p 1 0 0
chr12:6333811|6334173 hsa-miR-6742-3p 1 0 0
chr12:6333811|6334173 hsa-miR-1236-3p 1 0 0
chr12:6333811|6334173 hsa-miR-6867-3p 0 1 0
chr12:6333811|6334173 hsa-miR-6814-5p 0 1 0
chr12:6333811|6334173 hsa-miR-3614-3p 1 0 0
chr12:6333811|6334173 hsa-miR-6734-3p 1 1 0
chr12:6333811|6334173 hsa-miR-3675-5p 0 1 0
chr12:6333811|6334173 hsa-miR-651-3p 0 1 0
chr12:6333811|6334173 hsa-miR-4763-3p 1 0 0
chr12:6333811|6334173 hsa-miR-6775-5p 0 1 0
chr12:6333811|6334173 hsa-miR-6743-5p 1 1 0
chr12:6333811|6334173 hsa-miR-7107-5p 1 0 0
chr12:6333811|6334173 hsa-miR-4685-3p 1 0 0
chr12:6333811|6334173 hsa-miR-3620-5p 0 1 0
chr12:6333811|6334173 hsa-miR-328-5p 1 0 0
chr12:6333811|6334173 hsa-miR-4649-5p 1 0 0
chr12:6333811|6334173 hsa-miR-4745-3p 0 1 0
chr12:6333811|6334173 hsa-miR-939-5p 1 0 0
chr12:6333811|6334173 hsa-miR-6791-5p 1 0 0
chr12:6333811|6334173 hsa-miR-6822-5p 1 0 0
chr12:6333811|6334173 hsa-miR-6784-3p 1 1 0
chr12:6333811|6334173 hsa-miR-6862-3p 1 1 0
chr12:6333811|6334173 hsa-miR-6775-3p 0 1 0
chr12:6333811|6334173 hsa-miR-6859-5p 1 0 0
chr12:6333811|6334173 hsa-miR-6783-3p 1 1 0
chr12:6333811|6334173 hsa-miR-6833-3p 0 1 0
chr12:6333811|6334173 hsa-miR-7156-5p 0 1 0
chr12:6333811|6334173 hsa-miR-5699-3p 0 1 0
chr12:6333811|6334173 hsa-miR-10523-5p 0 1 0
chr12:6333811|6334173 hsa-miR-433-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr12:6333811|6334173
ORF Type ORF1
Protein Length 38
Nucleotide Length 114
Protein Sequence MRAFTVSTCPYLCGTWYSKSNYFEGGYIFLGDTHYLSS
Nucleotide Sequence CTGAGGGCATTCACCGTTTCCACTTGCCCCTACCTTTGTGGCACTTGGTACAGCAAATCGAATTATTTTGAGGGTGGATATATTTTCCTTGGGGACACACACTATCTCTCTTCT

CircID chr12:6333811|6334173
ORF Type ORF2
Protein Length 77
Nucleotide Length 234
Protein Sequence MPRAWTVIVQVGSCEWGRRVRLRVRTQGRSPMLGTTARADSLKSLGEEGGRKSQPRRDSKVREEQLEEAEKEAAPQT
Nucleotide Sequence CTGCCCCGGGCCTGGACAGTCATTGTACAAGTAGGTTCCTGTGAATGGGGCCGCAGAGTTAGGCTGCGGGTGAGAACACAAGGAAGGAGCCCCATGCTAGGGACAACAGCCAGGGCCGATTCCCTGAAGTCTCTAGGAGAGGAGGGAGGGAGAAAATCCCAGCCCAGGAGAGACAGCAAAGTTAGGGAAGAACAACTGGAAGAAGCAGAGAAAGAAGCAGCACCCCAGACCTGA

CircID chr12:6333811|6334173
ORF Type ORF3
Protein Length 35
Nucleotide Length 108
Protein Sequence MPSGLGCCFFLCFFQLFFPNFAVSPGLGFSPSLLS
Nucleotide Sequence ATGCCCTCAGGTCTGGGGTGCTGCTTCTTTCTCTGCTTCTTCCAGTTGTTCTTCCCTAACTTTGCTGTCTCTCCTGGGCTGGGATTTTCTCCCTCCCTCCTCTCCTAG

CircID chr12:6333811|6334173
ORF Type ORF4
Protein Length 32
Nucleotide Length 96
Protein Sequence MCSHPQPNSAAPFTGTYLYNDCPGPGQDTDCR
Nucleotide Sequence TTGTGTTCTCACCCGCAGCCTAACTCTGCGGCCCCATTCACAGGAACCTACTTGTACAATGACTGTCCAGGCCCGGGGCAGGATACGGACTGCAGG

CircID chr12:6333811|6334173
ORF Type ORF5
Protein Length 65
Nucleotide Length 195
Protein Sequence MLSLLGWDFLPPSSPRDFRESALAVVPSMGLLPCVLTRSLTLRPHSQEPTCTMTVQARGRIRTAG
Nucleotide Sequence TTGCTGTCTCTCCTGGGCTGGGATTTTCTCCCTCCCTCCTCTCCTAGAGACTTCAGGGAATCGGCCCTGGCTGTTGTCCCTAGCATGGGGCTCCTTCCTTGTGTTCTCACCCGCAGCCTAACTCTGCGGCCCCATTCACAGGAACCTACTTGTACAATGACTGTCCAGGCCCGGGGCAGGATACGGACTGCAGGG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites