CircRNA Information

General Information
circRNA Basic Information
CircID chr12:6450402|6450642
Strand -
CircType exon
Host Gene ENSG00000215039.5;
Algorism CIRI2;
Sequence CCCAACCAGTACTCCCCACTCCTACCCCTAGATAAGGTCAGCCTGTTTCTGCCTTCCCATCCCATCCAGCACCTCTCAGGCCTTCAGATGTGCCCTATGGGGTCCCCTGCTGCTACTCATTCTGTCTCTGTTTTTCCAGAGATGCTGGAGGCCAGGACAGCTGGGCACATGCAGACTCTGGCTGACTTCAGGCAGCTGCCTGCCCGGACTCTCTCTACCCACTGGCCACGTGAGTTTTCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:6450402|6450642 hsa-miR-15a-5p 0 0 1
chr12:6450402|6450642 hsa-miR-15a-3p 0 0 1
chr12:6450402|6450642 hsa-miR-22-5p 0 0 1
chr12:6450402|6450642 hsa-miR-22-3p 0 0 1
chr12:6450402|6450642 hsa-miR-214-5p 0 0 1
chr12:6450402|6450642 hsa-miR-214-3p 0 0 1
chr12:6450402|6450642 hsa-miR-15b-5p 0 0 1
chr12:6450402|6450642 hsa-miR-15b-3p 0 0 1
chr12:6450402|6450642 hsa-miR-195-5p 0 0 1
chr12:6450402|6450642 hsa-miR-195-3p 0 0 1
chr12:6450402|6450642 hsa-miR-326 0 0 1
chr12:6450402|6450642 hsa-miR-424-5p 0 0 1
chr12:6450402|6450642 hsa-miR-424-3p 0 0 1
chr12:6450402|6450642 hsa-miR-497-5p 0 0 1
chr12:6450402|6450642 hsa-miR-497-3p 0 0 1
chr12:6450402|6450642 hsa-miR-503-5p 0 0 1
chr12:6450402|6450642 hsa-miR-503-3p 0 0 1
chr12:6450402|6450642 hsa-miR-646 0 0 1
chr12:6450402|6450642 hsa-miR-766-5p 0 0 1
chr12:6450402|6450642 hsa-miR-766-3p 0 0 1
chr12:6450402|6450642 hsa-miR-939-5p 0 0 1
chr12:6450402|6450642 hsa-miR-939-3p 0 0 1
chr12:6450402|6450642 hsa-miR-1204 0 0 1
chr12:6450402|6450642 hsa-miR-1287-5p 0 0 1
chr12:6450402|6450642 hsa-miR-1287-3p 0 0 1
chr12:6450402|6450642 hsa-miR-1299 0 0 1
chr12:6450402|6450642 hsa-miR-1278 0 0 1
chr12:6450402|6450642 hsa-miR-491-5p 0 0 1
chr12:6450402|6450642 hsa-miR-875-3p 0 0 1
chr12:6450402|6450642 hsa-miR-455-5p 0 0 1
chr12:6450402|6450642 hsa-miR-338-3p 0 0 1
chr12:6450402|6450642 hsa-miR-330-5p 0 0 1
chr12:6450402|6450642 hsa-miR-16 0 0 1
chr12:6450402|6450642 hsa-miR-1201 0 0 1
chr12:6450402|6450642 hsa-miR-608 1 0 0
chr12:6450402|6450642 hsa-miR-612 0 1 0
chr12:6450402|6450642 hsa-miR-637 1 0 0
chr12:6450402|6450642 hsa-miR-638 1 0 0
chr12:6450402|6450642 hsa-miR-762 1 0 0
chr12:6450402|6450642 hsa-miR-298 0 1 0
chr12:6450402|6450642 hsa-miR-1268a 1 0 0
chr12:6450402|6450642 hsa-miR-2861 1 0 0
chr12:6450402|6450642 hsa-miR-3132 1 1 0
chr12:6450402|6450642 hsa-miR-3138 1 1 0
chr12:6450402|6450642 hsa-miR-3196 1 0 0
chr12:6450402|6450642 hsa-miR-3665 1 0 0
chr12:6450402|6450642 hsa-miR-3714 0 1 0
chr12:6450402|6450642 hsa-miR-3907 1 0 0
chr12:6450402|6450642 hsa-miR-3936 1 0 0
chr12:6450402|6450642 hsa-miR-3945 1 0 0
chr12:6450402|6450642 hsa-miR-1268b 1 0 0
chr12:6450402|6450642 hsa-miR-4458 1 0 0
chr12:6450402|6450642 hsa-miR-2392 1 0 0
chr12:6450402|6450642 hsa-miR-4507 1 0 0
chr12:6450402|6450642 hsa-miR-4510 1 0 0
chr12:6450402|6450642 hsa-miR-4651 1 0 0
chr12:6450402|6450642 hsa-miR-4654 1 0 0
chr12:6450402|6450642 hsa-miR-4656 1 0 0
chr12:6450402|6450642 hsa-miR-4688 1 0 0
chr12:6450402|6450642 hsa-miR-4692 0 1 0
chr12:6450402|6450642 hsa-miR-4741 1 0 0
chr12:6450402|6450642 hsa-miR-5194 1 1 0
chr12:6450402|6450642 hsa-miR-5572 1 0 0
chr12:6450402|6450642 hsa-miR-6125 1 0 0
chr12:6450402|6450642 hsa-miR-6126 0 1 0
chr12:6450402|6450642 hsa-miR-6127 1 0 0
chr12:6450402|6450642 hsa-miR-6129 1 0 0
chr12:6450402|6450642 hsa-miR-6130 1 0 0
chr12:6450402|6450642 hsa-miR-6745 1 0 0
chr12:6450402|6450642 hsa-miR-8077 1 0 0
chr12:6450402|6450642 hsa-miR-9718 1 0 0
chr12:6450402|6450642 hsa-miR-12119 1 0 0
chr12:6450402|6450642 hsa-miR-4435 0 1 0
chr12:6450402|6450642 hsa-miR-4433b-3p 1 1 0
chr12:6450402|6450642 hsa-miR-4731-5p 1 0 0
chr12:6450402|6450642 hsa-miR-504-3p 1 0 0
chr12:6450402|6450642 hsa-miR-3157-5p 0 1 0
chr12:6450402|6450642 hsa-miR-6747-5p 1 0 0
chr12:6450402|6450642 hsa-miR-4433a-3p 1 0 0
chr12:6450402|6450642 hsa-miR-6861-5p 1 0 0
chr12:6450402|6450642 hsa-miR-7106-5p 1 0 0
chr12:6450402|6450642 hsa-miR-6799-5p 1 0 0
chr12:6450402|6450642 hsa-miR-6510-5p 0 1 0
chr12:6450402|6450642 hsa-miR-6728-5p 1 1 0
chr12:6450402|6450642 hsa-miR-6089 1 0 0
chr12:6450402|6450642 hsa-miR-6757-5p 1 1 0
chr12:6450402|6450642 hsa-miR-4695-5p 1 0 0
chr12:6450402|6450642 hsa-miR-1301-3p 0 1 0
chr12:6450402|6450642 hsa-miR-6890-5p 1 0 0
chr12:6450402|6450642 hsa-miR-6741-5p 1 0 0
chr12:6450402|6450642 hsa-miR-6727-5p 1 0 0
chr12:6450402|6450642 hsa-miR-3622b-5p 1 0 0
chr12:6450402|6450642 hsa-miR-6721-5p 0 1 0
chr12:6450402|6450642 hsa-miR-197-5p 1 1 0
chr12:6450402|6450642 hsa-miR-6776-5p 1 0 0
chr12:6450402|6450642 hsa-miR-7108-5p 1 0 0
chr12:6450402|6450642 hsa-miR-6716-5p 1 0 0
chr12:6450402|6450642 hsa-miR-6871-5p 1 0 0
chr12:6450402|6450642 hsa-miR-6748-5p 1 0 0
chr12:6450402|6450642 hsa-miR-6772-5p 1 0 0
chr12:6450402|6450642 hsa-miR-6732-5p 1 0 0
chr12:6450402|6450642 hsa-miR-6881-5p 1 0 0
chr12:6450402|6450642 hsa-miR-6782-5p 1 0 0
chr12:6450402|6450642 hsa-miR-615-5p 1 0 0
chr12:6450402|6450642 hsa-miR-6835-5p 1 0 0
chr12:6450402|6450642 hsa-miR-5088-5p 1 0 0
chr12:6450402|6450642 hsa-miR-7109-5p 1 0 0
chr12:6450402|6450642 hsa-miR-1226-5p 1 1 0
chr12:6450402|6450642 hsa-miR-204-3p 1 1 0
chr12:6450402|6450642 hsa-miR-1229-5p 1 1 0
chr12:6450402|6450642 hsa-miR-296-3p 1 0 0
chr12:6450402|6450642 hsa-miR-92b-5p 1 0 0
chr12:6450402|6450642 hsa-miR-6749-5p 1 0 0
chr12:6450402|6450642 hsa-miR-7854-3p 1 0 0
chr12:6450402|6450642 hsa-miR-6878-3p 0 1 0
chr12:6450402|6450642 hsa-miR-3648 1 0 0
chr12:6450402|6450642 hsa-miR-4446-3p 1 0 0
chr12:6450402|6450642 hsa-miR-149-3p 1 0 0
chr12:6450402|6450642 hsa-miR-6824-5p 1 0 0
chr12:6450402|6450642 hsa-miR-6789-5p 1 0 0
chr12:6450402|6450642 hsa-miR-7112-5p 0 1 0
chr12:6450402|6450642 hsa-miR-6869-5p 0 1 0
chr12:6450402|6450642 hsa-miR-1250-5p 1 0 0
chr12:6450402|6450642 hsa-miR-6832-5p 0 1 0
chr12:6450402|6450642 hsa-miR-6761-5p 0 1 0
chr12:6450402|6450642 hsa-miR-3144-5p 0 1 0
chr12:6450402|6450642 hsa-miR-1207-5p 1 0 0
chr12:6450402|6450642 hsa-miR-1233-5p 1 0 0
chr12:6450402|6450642 hsa-miR-4763-3p 1 0 0
chr12:6450402|6450642 hsa-miR-6769b-5p 1 0 0
chr12:6450402|6450642 hsa-miR-6778-5p 1 0 0
chr12:6450402|6450642 hsa-miR-6812-5p 1 1 0
chr12:6450402|6450642 hsa-miR-6816-5p 1 0 0
chr12:6450402|6450642 hsa-miR-6726-5p 1 0 0
chr12:6450402|6450642 hsa-miR-6737-5p 1 0 0
chr12:6450402|6450642 hsa-miR-6743-5p 1 0 0
chr12:6450402|6450642 hsa-miR-6756-5p 1 1 0
chr12:6450402|6450642 hsa-miR-6803-5p 1 0 0
chr12:6450402|6450642 hsa-miR-6813-5p 1 0 0
chr12:6450402|6450642 hsa-miR-6819-5p 1 0 0
chr12:6450402|6450642 hsa-miR-10401-5p 1 0 0
chr12:6450402|6450642 hsa-miR-6722-3p 1 1 0
chr12:6450402|6450642 hsa-miR-6751-5p 1 0 0
chr12:6450402|6450642 hsa-miR-6763-5p 1 1 0
chr12:6450402|6450642 hsa-miR-6779-5p 1 1 0
chr12:6450402|6450642 hsa-miR-6780a-5p 1 1 0
chr12:6450402|6450642 hsa-miR-6797-5p 1 0 0
chr12:6450402|6450642 hsa-miR-6879-5p 1 0 0
chr12:6450402|6450642 hsa-miR-7111-5p 1 0 0
chr12:6450402|6450642 hsa-miR-3620-5p 1 0 0
chr12:6450402|6450642 hsa-miR-4728-5p 1 1 0
chr12:6450402|6450642 hsa-miR-5196-5p 1 1 0
chr12:6450402|6450642 hsa-miR-6780b-5p 1 0 0
chr12:6450402|6450642 hsa-miR-6836-5p 1 0 0
chr12:6450402|6450642 hsa-miR-1909-3p 1 0 0
chr12:6450402|6450642 hsa-miR-4632-5p 1 0 0
chr12:6450402|6450642 hsa-miR-4725-3p 1 0 0
chr12:6450402|6450642 hsa-miR-4726-5p 1 0 0
chr12:6450402|6450642 hsa-miR-6738-5p 1 0 0
chr12:6450402|6450642 hsa-miR-6795-5p 1 0 0
chr12:6450402|6450642 hsa-miR-6846-5p 1 0 0
chr12:6450402|6450642 hsa-miR-6848-5p 1 0 0
chr12:6450402|6450642 hsa-miR-3187-5p 0 1 0
chr12:6450402|6450642 hsa-miR-4436b-3p 0 1 0
chr12:6450402|6450642 hsa-miR-4758-5p 1 1 0
chr12:6450402|6450642 hsa-miR-4769-5p 1 0 0
chr12:6450402|6450642 hsa-miR-1910-3p 1 1 0
chr12:6450402|6450642 hsa-miR-6511a-5p 1 1 0
chr12:6450402|6450642 hsa-miR-3940-5p 1 0 0
chr12:6450402|6450642 hsa-miR-6731-5p 1 0 0
chr12:6450402|6450642 hsa-miR-6758-5p 0 1 0
chr12:6450402|6450642 hsa-miR-7843-5p 0 1 0
chr12:6450402|6450642 hsa-miR-1914-3p 1 0 0
chr12:6450402|6450642 hsa-miR-3173-3p 1 0 0
chr12:6450402|6450642 hsa-miR-4646-5p 1 0 0
chr12:6450402|6450642 hsa-miR-4747-5p 1 1 0
chr12:6450402|6450642 hsa-miR-6766-5p 1 1 0
chr12:6450402|6450642 hsa-miR-6785-5p 1 0 0
chr12:6450402|6450642 hsa-miR-6838-5p 1 1 0
chr12:6450402|6450642 hsa-miR-6843-3p 0 1 0
chr12:6450402|6450642 hsa-miR-3059-3p 1 0 0
chr12:6450402|6450642 hsa-miR-3922-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr12:6450402|6450642
ORF Type ORF1
Protein Length 66
Nucleotide Length 198
Protein Sequence MFLPSHPIQHLSGLQMCPMGSPAATHSVSVFPEMLEARTAGHMQTLADFRQLPARTLSTHWPREFS
Nucleotide Sequence CTGTTTCTGCCTTCCCATCCCATCCAGCACCTCTCAGGCCTTCAGATGTGCCCTATGGGGTCCCCTGCTGCTACTCATTCTGTCTCTGTTTTTCCAGAGATGCTGGAGGCCAGGACAGCTGGGCACATGCAGACTCTGGCTGACTTCAGGCAGCTGCCTGCCCGGACTCTCTCTACCCACTGGCCACGTGAGTTTTCT
CircID chr12:6450402|6450642
ORF Type ORF2
Protein Length 45
Nucleotide Length 135
Protein Sequence MLLLILSLFFQRCWRPGQLGTCRLWLTSGSCLPGLSLPTGHVSFL
Nucleotide Sequence CTGCTGCTACTCATTCTGTCTCTGTTTTTCCAGAGATGCTGGAGGCCAGGACAGCTGGGCACATGCAGACTCTGGCTGACTTCAGGCAGCTGCCTGCCCGGACTCTCTCTACCCACTGGCCACGTGAGTTTTCTC
CircID chr12:6450402|6450642
ORF Type ORF3
Protein Length 39
Nucleotide Length 120
Protein Sequence MPEVSQSLHVPSCPGLQHLWKNRDRMSSSRGPHRAHLKA
Nucleotide Sequence CTGCCTGAAGTCAGCCAGAGTCTGCATGTGCCCAGCTGTCCTGGCCTCCAGCATCTCTGGAAAAACAGAGACAGAATGAGTAGCAGCAGGGGACCCCATAGGGCACATCTGAAGGCCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab