CircRNA Information

General Information
circRNA Basic Information
CircID chr12:6529534|6529850
Strand -
CircType exon
Host Gene ENSG00000010292.11;
Algorism CIRI2;
Sequence CAAGGACAAGCAGACAGAGAGCCTGGTGGAAAAGCTGTGTCAGCGGTTCCGCACATCCCGGTATGCTGCCCTCCCTGAGGGTTCTTTGTGCTGAGCGGGGCCCTGCAGGGGAGAAAGGCCCATCCCTCACCCCTTCAATGCCCCCACTGTGGCATCCCTGGGACTGGGGAGGCTGATGGGGAAGGTTGAGCCTTTACTAGCTGGATCTCCCAGTTCCTCACAAAGCCCTTCCTATCTGCAGAACTGAGCGGCAGCAGCGAGACCTGGCCTACTGTGTGTCACAGCTGCCCCTCACAGAGCGAGGCCTCCGTAAGATG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:6529534|6529850 hsa-miR-107 0 0 1
chr12:6529534|6529850 hsa-miR-346 0 0 1
chr12:6529534|6529850 hsa-miR-484 0 1 1
chr12:6529534|6529850 hsa-miR-632 0 1 1
chr12:6529534|6529850 hsa-miR-639 0 1 1
chr12:6529534|6529850 hsa-miR-758-5p 0 0 1
chr12:6529534|6529850 hsa-miR-758-3p 0 0 1
chr12:6529534|6529850 hsa-miR-147b-5p 0 0 1
chr12:6529534|6529850 hsa-miR-147b-3p 0 0 1
chr12:6529534|6529850 hsa-miR-1205 0 1 1
chr12:6529534|6529850 hsa-miR-1294 0 0 1
chr12:6529534|6529850 hsa-miR-1256 0 0 1
chr12:6529534|6529850 hsa-miR-1266-5p 0 0 1
chr12:6529534|6529850 hsa-miR-1266-3p 0 0 1
chr12:6529534|6529850 hsa-miR-1321 0 0 1
chr12:6529534|6529850 hsa-miR-296-5p 0 0 1
chr12:6529534|6529850 hsa-miR-486-3p 0 1 1
chr12:6529534|6529850 hsa-miR-1184 0 0 1
chr12:6529534|6529850 hsa-miR-423-5p 0 1 1
chr12:6529534|6529850 hsa-miR-628-3p 0 0 1
chr12:6529534|6529850 hsa-miR-331-3p 0 0 1
chr12:6529534|6529850 hsa-miR-542-3p 0 0 1
chr12:6529534|6529850 hsa-miR-548b-3p 0 0 1
chr12:6529534|6529850 hsa-miR-128 0 0 1
chr12:6529534|6529850 hsa-miR-103 0 0 1
chr12:6529534|6529850 hsa-miR-544 0 0 1
chr12:6529534|6529850 hsa-miR-720 0 0 1
chr12:6529534|6529850 hsa-miR-596 1 0 0
chr12:6529534|6529850 hsa-miR-623 1 1 0
chr12:6529534|6529850 hsa-miR-637 1 0 0
chr12:6529534|6529850 hsa-miR-663a 1 0 0
chr12:6529534|6529850 hsa-miR-658 1 0 0
chr12:6529534|6529850 hsa-miR-760 1 0 0
chr12:6529534|6529850 hsa-miR-921 1 0 0
chr12:6529534|6529850 hsa-miR-4270 1 0 0
chr12:6529534|6529850 hsa-miR-1268b 1 0 0
chr12:6529534|6529850 hsa-miR-4447 0 1 0
chr12:6529534|6529850 hsa-miR-4449 1 0 0
chr12:6529534|6529850 hsa-miR-4462 1 0 0
chr12:6529534|6529850 hsa-miR-4476 0 1 0
chr12:6529534|6529850 hsa-miR-4479 1 0 0
chr12:6529534|6529850 hsa-miR-4518 0 1 0
chr12:6529534|6529850 hsa-miR-4651 1 0 0
chr12:6529534|6529850 hsa-miR-4656 1 0 0
chr12:6529534|6529850 hsa-miR-4683 1 1 0
chr12:6529534|6529850 hsa-miR-4688 0 1 0
chr12:6529534|6529850 hsa-miR-4706 1 0 0
chr12:6529534|6529850 hsa-miR-4739 1 1 0
chr12:6529534|6529850 hsa-miR-4741 1 0 0
chr12:6529534|6529850 hsa-miR-5194 0 1 0
chr12:6529534|6529850 hsa-miR-6069 1 0 0
chr12:6529534|6529850 hsa-miR-1843 0 1 0
chr12:6529534|6529850 hsa-miR-12128 1 1 0
chr12:6529534|6529850 hsa-miR-211-3p 1 0 0
chr12:6529534|6529850 hsa-miR-6749-3p 1 0 0
chr12:6529534|6529850 hsa-miR-6825-5p 1 0 0
chr12:6529534|6529850 hsa-miR-3192-5p 1 1 0
chr12:6529534|6529850 hsa-miR-6757-5p 1 1 0
chr12:6529534|6529850 hsa-miR-24-3p 0 1 0
chr12:6529534|6529850 hsa-miR-3928-3p 0 1 0
chr12:6529534|6529850 hsa-miR-200b-5p 0 1 0
chr12:6529534|6529850 hsa-miR-6798-5p 1 0 0
chr12:6529534|6529850 hsa-miR-6760-5p 1 0 0
chr12:6529534|6529850 hsa-miR-6782-5p 1 1 0
chr12:6529534|6529850 hsa-miR-6850-5p 1 1 0
chr12:6529534|6529850 hsa-miR-6786-5p 1 0 0
chr12:6529534|6529850 hsa-miR-1226-5p 1 1 0
chr12:6529534|6529850 hsa-miR-4763-5p 1 0 0
chr12:6529534|6529850 hsa-miR-1229-5p 1 0 0
chr12:6529534|6529850 hsa-miR-885-3p 1 0 0
chr12:6529534|6529850 hsa-miR-652-5p 0 1 0
chr12:6529534|6529850 hsa-miR-6771-5p 1 0 0
chr12:6529534|6529850 hsa-miR-6834-5p 0 1 0
chr12:6529534|6529850 hsa-miR-149-3p 1 0 0
chr12:6529534|6529850 hsa-miR-6824-5p 1 0 0
chr12:6529534|6529850 hsa-miR-3162-5p 1 0 0
chr12:6529534|6529850 hsa-miR-3158-5p 1 1 0
chr12:6529534|6529850 hsa-miR-6886-5p 1 0 0
chr12:6529534|6529850 hsa-miR-194-3p 0 1 0
chr12:6529534|6529850 hsa-miR-6825-3p 0 1 0
chr12:6529534|6529850 hsa-miR-7112-5p 1 0 0
chr12:6529534|6529850 hsa-miR-7160-3p 0 1 0
chr12:6529534|6529850 hsa-miR-1911-3p 0 1 0
chr12:6529534|6529850 hsa-miR-208a-5p 0 1 0
chr12:6529534|6529850 hsa-miR-106b-3p 1 0 0
chr12:6529534|6529850 hsa-miR-2355-5p 0 1 0
chr12:6529534|6529850 hsa-miR-503-3p 1 0 0
chr12:6529534|6529850 hsa-miR-7113-5p 0 1 0
chr12:6529534|6529850 hsa-miR-4746-5p 0 1 0
chr12:6529534|6529850 hsa-miR-6734-3p 0 1 0
chr12:6529534|6529850 hsa-miR-3179 0 1 0
chr12:6529534|6529850 hsa-miR-19b-1-5p 1 0 0
chr12:6529534|6529850 hsa-miR-4804-3p 0 1 0
chr12:6529534|6529850 hsa-miR-6812-5p 1 0 0
chr12:6529534|6529850 hsa-miR-6816-5p 1 0 0
chr12:6529534|6529850 hsa-miR-6775-5p 1 1 0
chr12:6529534|6529850 hsa-miR-1343-5p 1 0 0
chr12:6529534|6529850 hsa-miR-6743-5p 1 1 0
chr12:6529534|6529850 hsa-miR-6754-5p 1 1 0
chr12:6529534|6529850 hsa-miR-6756-5p 1 0 0
chr12:6529534|6529850 hsa-miR-6803-5p 1 0 0
chr12:6529534|6529850 hsa-miR-6722-3p 1 0 0
chr12:6529534|6529850 hsa-miR-6751-5p 1 0 0
chr12:6529534|6529850 hsa-miR-6779-5p 1 0 0
chr12:6529534|6529850 hsa-miR-6780a-5p 1 0 0
chr12:6529534|6529850 hsa-miR-6788-5p 0 1 0
chr12:6529534|6529850 hsa-miR-6808-5p 1 0 0
chr12:6529534|6529850 hsa-miR-7111-5p 1 0 0
chr12:6529534|6529850 hsa-miR-6780b-5p 1 0 0
chr12:6529534|6529850 hsa-miR-6836-5p 1 1 0
chr12:6529534|6529850 hsa-miR-10396b-5p 1 0 0
chr12:6529534|6529850 hsa-miR-1237-5p 1 0 0
chr12:6529534|6529850 hsa-miR-328-5p 1 1 0
chr12:6529534|6529850 hsa-miR-4632-5p 1 1 0
chr12:6529534|6529850 hsa-miR-4649-5p 1 0 0
chr12:6529534|6529850 hsa-miR-4725-3p 1 0 0
chr12:6529534|6529850 hsa-miR-6738-5p 1 0 0
chr12:6529534|6529850 hsa-miR-6777-5p 1 0 0
chr12:6529534|6529850 hsa-miR-6846-5p 1 0 0
chr12:6529534|6529850 hsa-miR-6848-5p 1 0 0
chr12:6529534|6529850 hsa-miR-6883-5p 1 1 0
chr12:6529534|6529850 hsa-miR-6889-5p 1 0 0
chr12:6529534|6529850 hsa-miR-6885-5p 1 0 0
chr12:6529534|6529850 hsa-miR-6731-5p 1 0 0
chr12:6529534|6529850 hsa-miR-6791-3p 1 1 0
chr12:6529534|6529850 hsa-miR-4472 0 1 0
chr12:6529534|6529850 hsa-miR-6785-5p 1 1 0
chr12:6529534|6529850 hsa-miR-6791-5p 1 0 0
chr12:6529534|6529850 hsa-miR-4756-5p 0 1 0
chr12:6529534|6529850 hsa-miR-10394-5p 0 1 0
chr12:6529534|6529850 hsa-miR-6764-5p 0 1 0
chr12:6529534|6529850 hsa-miR-200a-5p 0 1 0
chr12:6529534|6529850 hsa-miR-5588-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr12:6529534|6529850
ORF Type ORF1
Protein Length 32
Nucleotide Length 99
Protein Sequence MSGALQGRKAHPSPLQCPHCGIPGTGEADGEG
Nucleotide Sequence CTGAGCGGGGCCCTGCAGGGGAGAAAGGCCCATCCCTCACCCCTTCAATGCCCCCACTGTGGCATCCCTGGGACTGGGGAGGCTGATGGGGAAGGTTGA

CircID chr12:6529534|6529850
ORF Type ORF2
Protein Length 29
Nucleotide Length 90
Protein Sequence MGLGRLMGKVEPLLAGSPSSSQSPSYLQN
Nucleotide Sequence CTGGGACTGGGGAGGCTGATGGGGAAGGTTGAGCCTTTACTAGCTGGATCTCCCAGTTCCTCACAAAGCCCTTCCTATCTGCAGAACTGA

CircID chr12:6529534|6529850
ORF Type ORF3
Protein Length 37
Nucleotide Length 114
Protein Sequence MLPSLRVLCAERGPAGEKGPSLTPSMPPLWHPWDWGG
Nucleotide Sequence ATGCTGCCCTCCCTGAGGGTTCTTTGTGCTGAGCGGGGCCCTGCAGGGGAGAAAGGCCCATCCCTCACCCCTTCAATGCCCCCACTGTGGCATCCCTGGGACTGGGGAGGCTGA

CircID chr12:6529534|6529850
ORF Type ORF4
Protein Length 39
Nucleotide Length 117
Protein Sequence MDLPVPHKALPICRTERQQRDLAYCVSQLPLTERGLRKM
Nucleotide Sequence CTGGATCTCCCAGTTCCTCACAAAGCCCTTCCTATCTGCAGAACTGAGCGGCAGCAGCGAGACCTGGCCTACTGTGTGTCACAGCTGCCCCTCACAGAGCGAGGCCTCCGTAAGATG

CircID chr12:6529534|6529850
ORF Type ORF5
Protein Length 40
Nucleotide Length 123
Protein Sequence MLPLSSADRKGFVRNWEIQLVKAQPSPSASPVPGMPQWGH
Nucleotide Sequence CTGCTGCCGCTCAGTTCTGCAGATAGGAAGGGCTTTGTGAGGAACTGGGAGATCCAGCTAGTAAAGGCTCAACCTTCCCCATCAGCCTCCCCAGTCCCAGGGATGCCACAGTGGGGGCATTGA

CircID chr12:6529534|6529850
ORF Type ORF6
Protein Length 28
Nucleotide Length 87
Protein Sequence MGDPASKGSTFPISLPSPRDATVGALKG
Nucleotide Sequence CTGGGAGATCCAGCTAGTAAAGGCTCAACCTTCCCCATCAGCCTCCCCAGTCCCAGGGATGCCACAGTGGGGGCATTGAAGGGGTGA

CircID chr12:6529534|6529850
ORF Type ORF7
Protein Length 27
Nucleotide Length 84
Protein Sequence MGLSPLQGPAQHKEPSGRAAYRDVRNR
Nucleotide Sequence ATGGGCCTTTCTCCCCTGCAGGGCCCCGCTCAGCACAAAGAACCCTCAGGGAGGGCAGCATACCGGGATGTGCGGAACCGCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites