CircRNA Information

General Information
circRNA Basic Information
CircID chr12:6536684|6536973
Strand +
CircType exon
Host Gene ENSG00000111640.13;
Algorism CIRI2;
Sequence TCCACGACGTACTCAGCGCCAGCATCGCCCCACTTGATTTTGGAGGGATCTCGCCTATGGGGGTGGGGGGGAGATGGGGACAGGACCATATTGAGGGACACAAGGTTACCATATACCCAAGGGAGCCACACCATCCTAGTTGCCTCCCCAAAGCACATTTCTTCCATTCTGTCTTCCACTCACTCCTGGAAGATGGTGATGGGATTTCCATTGATGACAAGCTTCCCGTTCTCAGCCTTGACGGTGCCATGGAATTTGCCATGGGTGGAATCATATTGGAACATGTAAAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:6536684|6536973 hsa-miR-183-5p 0 0 1
chr12:6536684|6536973 hsa-miR-183-3p 0 0 1
chr12:6536684|6536973 hsa-miR-146a-5p 0 0 1
chr12:6536684|6536973 hsa-miR-146a-3p 0 0 1
chr12:6536684|6536973 hsa-miR-581 0 1 1
chr12:6536684|6536973 hsa-miR-589-5p 0 0 1
chr12:6536684|6536973 hsa-miR-589-3p 0 0 1
chr12:6536684|6536973 hsa-miR-592 0 0 1
chr12:6536684|6536973 hsa-miR-599 0 0 1
chr12:6536684|6536973 hsa-miR-605-5p 0 0 1
chr12:6536684|6536973 hsa-miR-605-3p 0 0 1
chr12:6536684|6536973 hsa-miR-623 0 0 1
chr12:6536684|6536973 hsa-miR-636 0 0 1
chr12:6536684|6536973 hsa-miR-650 0 0 1
chr12:6536684|6536973 hsa-miR-665 0 0 1
chr12:6536684|6536973 hsa-miR-939-5p 0 0 1
chr12:6536684|6536973 hsa-miR-939-3p 0 0 1
chr12:6536684|6536973 hsa-miR-1265 0 0 1
chr12:6536684|6536973 hsa-miR-1225-5p 0 0 1
chr12:6536684|6536973 hsa-miR-146b-5p 0 0 1
chr12:6536684|6536973 hsa-miR-7 0 0 1
chr12:6536684|6536973 hsa-miR-644 0 0 1
chr12:6536684|6536973 hsa-miR-218 0 0 1
chr12:6536684|6536973 hsa-miR-638 1 0 0
chr12:6536684|6536973 hsa-miR-644a 0 1 0
chr12:6536684|6536973 hsa-miR-3174 0 1 0
chr12:6536684|6536973 hsa-miR-4312 1 0 0
chr12:6536684|6536973 hsa-miR-3612 0 1 0
chr12:6536684|6536973 hsa-miR-3657 0 1 0
chr12:6536684|6536973 hsa-miR-3916 1 0 0
chr12:6536684|6536973 hsa-miR-3135b 1 0 0
chr12:6536684|6536973 hsa-miR-4486 1 0 0
chr12:6536684|6536973 hsa-miR-4656 1 1 0
chr12:6536684|6536973 hsa-miR-4739 1 0 0
chr12:6536684|6536973 hsa-miR-5787 1 0 0
chr12:6536684|6536973 hsa-miR-6745 0 1 0
chr12:6536684|6536973 hsa-miR-8063 0 1 0
chr12:6536684|6536973 hsa-miR-12115 1 0 0
chr12:6536684|6536973 hsa-miR-141-5p 0 1 0
chr12:6536684|6536973 hsa-miR-4433b-3p 0 1 0
chr12:6536684|6536973 hsa-miR-4433a-3p 1 1 0
chr12:6536684|6536973 hsa-miR-125a-3p 1 0 0
chr12:6536684|6536973 hsa-miR-6833-5p 1 1 0
chr12:6536684|6536973 hsa-miR-7847-3p 1 0 0
chr12:6536684|6536973 hsa-miR-6746-5p 1 0 0
chr12:6536684|6536973 hsa-miR-4728-3p 1 0 0
chr12:6536684|6536973 hsa-miR-3151-5p 0 1 0
chr12:6536684|6536973 hsa-miR-6748-5p 0 1 0
chr12:6536684|6536973 hsa-miR-6793-5p 1 0 0
chr12:6536684|6536973 hsa-miR-3190-3p 0 1 0
chr12:6536684|6536973 hsa-miR-6782-5p 1 1 0
chr12:6536684|6536973 hsa-miR-6774-3p 1 0 0
chr12:6536684|6536973 hsa-miR-532-3p 0 1 0
chr12:6536684|6536973 hsa-miR-6884-3p 0 1 0
chr12:6536684|6536973 hsa-miR-5010-3p 1 0 0
chr12:6536684|6536973 hsa-miR-3127-5p 1 1 0
chr12:6536684|6536973 hsa-miR-887-3p 1 0 0
chr12:6536684|6536973 hsa-miR-6717-5p 0 1 0
chr12:6536684|6536973 hsa-miR-6800-5p 1 0 0
chr12:6536684|6536973 hsa-miR-3189-3p 0 1 0
chr12:6536684|6536973 hsa-miR-4646-3p 1 1 0
chr12:6536684|6536973 hsa-miR-7106-3p 1 0 0
chr12:6536684|6536973 hsa-miR-6813-3p 1 0 0
chr12:6536684|6536973 hsa-miR-519d-5p 0 1 0
chr12:6536684|6536973 hsa-miR-6814-5p 1 0 0
chr12:6536684|6536973 hsa-miR-6782-3p 1 0 0
chr12:6536684|6536973 hsa-miR-551b-5p 0 1 0
chr12:6536684|6536973 hsa-miR-6883-3p 0 1 0
chr12:6536684|6536973 hsa-miR-6748-3p 0 1 0
chr12:6536684|6536973 hsa-miR-4433b-5p 1 0 0
chr12:6536684|6536973 hsa-miR-6732-3p 1 0 0
chr12:6536684|6536973 hsa-miR-7844-5p 1 1 0
chr12:6536684|6536973 hsa-miR-652-3p 0 1 0
chr12:6536684|6536973 hsa-miR-6812-5p 1 1 0
chr12:6536684|6536973 hsa-miR-1343-5p 1 0 0
chr12:6536684|6536973 hsa-miR-6752-5p 1 0 0
chr12:6536684|6536973 hsa-miR-6763-5p 0 1 0
chr12:6536684|6536973 hsa-miR-328-5p 1 0 0
chr12:6536684|6536973 hsa-miR-4649-5p 1 0 0
chr12:6536684|6536973 hsa-miR-6729-5p 1 0 0
chr12:6536684|6536973 hsa-miR-6777-5p 0 1 0
chr12:6536684|6536973 hsa-miR-6889-5p 1 0 0
chr12:6536684|6536973 hsa-miR-1238-5p 0 1 0
chr12:6536684|6536973 hsa-miR-4758-5p 0 1 0
chr12:6536684|6536973 hsa-miR-1266-5p 1 0 0
chr12:6536684|6536973 hsa-miR-10398-5p 1 1 0
chr12:6536684|6536973 hsa-miR-6891-3p 0 1 0
chr12:6536684|6536973 hsa-miR-6884-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr12:6536684|6536973
ORF Type ORF1
Protein Length 84
Nucleotide Length 255
Protein Sequence MILEGSRLWGWGGDGDRTILRDTRLPYTQGSHTILVASPKHISSILSSTHSWKMVMGFPLMTSFPFSALTVPWNLPWVESYWNM
Nucleotide Sequence TTGATTTTGGAGGGATCTCGCCTATGGGGGTGGGGGGGAGATGGGGACAGGACCATATTGAGGGACACAAGGTTACCATATACCCAAGGGAGCCACACCATCCTAGTTGCCTCCCCAAAGCACATTTCTTCCATTCTGTCTTCCACTCACTCCTGGAAGATGGTGATGGGATTTCCATTGATGACAAGCTTCCCGTTCTCAGCCTTGACGGTGCCATGGAATTTGCCATGGGTGGAATCATATTGGAACATGTAA
CircID chr12:6536684|6536973
ORF Type ORF2
Protein Length 78
Nucleotide Length 234
Protein Sequence MGVGGRWGQDHIEGHKVTIYPREPHHPSCLPKAHFFHSVFHSLLEDGDGISIDDKLPVLSLDGAMEFAMGGIILEHVN
Nucleotide Sequence ATGGGGGTGGGGGGGAGATGGGGACAGGACCATATTGAGGGACACAAGGTTACCATATACCCAAGGGAGCCACACCATCCTAGTTGCCTCCCCAAAGCACATTTCTTCCATTCTGTCTTCCACTCACTCCTGGAAGATGGTGATGGGATTTCCATTGATGACAAGCTTCCCGTTCTCAGCCTTGACGGTGCCATGGAATTTGCCATGGGTGGAATCATATTGGAACATGTAAAC
CircID chr12:6536684|6536973
ORF Type ORF3
Protein Length 34
Nucleotide Length 105
Protein Sequence MFQYDSTHGKFHGTVKAENGKLVINGNPITIFQE
Nucleotide Sequence ATGTTCCAATATGATTCCACCCATGGCAAATTCCATGGCACCGTCAAGGCTGAGAACGGGAAGCTTGTCATCAATGGAAATCCCATCACCATCTTCCAGGAGTGA
CircID chr12:6536684|6536973
ORF Type ORF4
Protein Length 55
Nucleotide Length 165
Protein Sequence MEEMCFGEATRMVWLPWVYGNLVSLNMVLSPSPPHPHRRDPSKIKWGDAGAEYVV
Nucleotide Sequence ATGGAAGAAATGTGCTTTGGGGAGGCAACTAGGATGGTGTGGCTCCCTTGGGTATATGGTAACCTTGTGTCCCTCAATATGGTCCTGTCCCCATCTCCCCCCCACCCCCATAGGCGAGATCCCTCCAAAATCAAGTGGGGCGATGCTGGCGCTGAGTACGTCGTG
CircID chr12:6536684|6536973
ORF Type ORF5
Protein Length 91
Nucleotide Length 273
Protein Sequence MIPPMANSMAPSRLRTGSLSSMEIPSPSSRSEWKTEWKKCALGRQLGWCGSLGYMVTLCPSIWSCPHLPPTPIGEIPPKSSGAMLALSTSW
Nucleotide Sequence ATGATTCCACCCATGGCAAATTCCATGGCACCGTCAAGGCTGAGAACGGGAAGCTTGTCATCAATGGAAATCCCATCACCATCTTCCAGGAGTGAGTGGAAGACAGAATGGAAGAAATGTGCTTTGGGGAGGCAACTAGGATGGTGTGGCTCCCTTGGGTATATGGTAACCTTGTGTCCCTCAATATGGTCCTGTCCCCATCTCCCCCCCACCCCCATAGGCGAGATCCCTCCAAAATCAAGTGGGGCGATGCTGGCGCTGAGTACGTCGTGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab