CircRNA Information

General Information
circRNA Basic Information
CircID chr12:6536690|6536985
Strand -
CircType exon
Host Gene ENSG00000111640.13;
Algorism CIRI2;
Sequence ATGTTCCAATATGATTCCACCCATGGCAAATTCCATGGCACCGTCAAGGCTGAGAACGGGAAGCTTGTCATCAATGGAAATCCCATCACCATCTTCCAGGAGTGAGTGGAAGACAGAATGGAAGAAATGTGCTTTGGGGAGGCAACTAGGATGGTGTGGCTCCCTTGGGTATATGGTAACCTTGTGTCCCTCAATATGGTCCTGTCCCCATCTCCCCCCCACCCCCATAGGCGAGATCCCTCCAAAATCAAGTGGGGCGATGCTGGCGCTGAGTACGTCGTGGAGTCCACTGGCGT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:6536690|6536985 hsa-miR-510-5p 0 0 1
chr12:6536690|6536985 hsa-miR-510-3p 0 0 1
chr12:6536690|6536985 hsa-miR-587 0 0 1
chr12:6536690|6536985 hsa-miR-608 1 1 1
chr12:6536690|6536985 hsa-miR-624-5p 0 0 1
chr12:6536690|6536985 hsa-miR-624-3p 0 0 1
chr12:6536690|6536985 hsa-miR-1293 0 0 1
chr12:6536690|6536985 hsa-miR-1279 0 0 1
chr12:6536690|6536985 hsa-miR-512-5p 1 1 1
chr12:6536690|6536985 hsa-miR-330-3p 0 0 1
chr12:6536690|6536985 hsa-miR-409-5p 0 0 1
chr12:6536690|6536985 hsa-miR-338-3p 0 1 1
chr12:6536690|6536985 hsa-miR-483-3p 0 0 1
chr12:6536690|6536985 hsa-miR-876-5p 0 0 1
chr12:6536690|6536985 hsa-miR-7 0 0 1
chr12:6536690|6536985 hsa-miR-1308 0 0 1
chr12:6536690|6536985 hsa-miR-768-5p 0 0 1
chr12:6536690|6536985 hsa-miR-638 1 0 0
chr12:6536690|6536985 hsa-miR-762 1 0 0
chr12:6536690|6536985 hsa-miR-1268a 1 0 0
chr12:6536690|6536985 hsa-miR-4298 1 0 0
chr12:6536690|6536985 hsa-miR-1268b 1 0 0
chr12:6536690|6536985 hsa-miR-4647 0 1 0
chr12:6536690|6536985 hsa-miR-4651 1 1 0
chr12:6536690|6536985 hsa-miR-5194 1 0 0
chr12:6536690|6536985 hsa-miR-5698 1 0 0
chr12:6536690|6536985 hsa-miR-6127 1 0 0
chr12:6536690|6536985 hsa-miR-6745 0 1 0
chr12:6536690|6536985 hsa-miR-8085 1 0 0
chr12:6536690|6536985 hsa-miR-8089 1 1 0
chr12:6536690|6536985 hsa-miR-6836-3p 0 1 0
chr12:6536690|6536985 hsa-miR-7106-5p 1 0 0
chr12:6536690|6536985 hsa-miR-6825-5p 1 0 0
chr12:6536690|6536985 hsa-miR-6894-5p 1 0 0
chr12:6536690|6536985 hsa-miR-6857-5p 1 0 0
chr12:6536690|6536985 hsa-miR-6799-5p 1 0 0
chr12:6536690|6536985 hsa-miR-6728-5p 1 0 0
chr12:6536690|6536985 hsa-miR-6757-5p 1 0 0
chr12:6536690|6536985 hsa-miR-6721-5p 1 1 0
chr12:6536690|6536985 hsa-miR-7845-5p 1 0 0
chr12:6536690|6536985 hsa-miR-6716-5p 1 0 0
chr12:6536690|6536985 hsa-miR-3151-5p 1 0 0
chr12:6536690|6536985 hsa-miR-6748-5p 1 0 0
chr12:6536690|6536985 hsa-miR-4697-3p 1 0 0
chr12:6536690|6536985 hsa-miR-6827-5p 0 1 0
chr12:6536690|6536985 hsa-miR-6782-5p 1 0 0
chr12:6536690|6536985 hsa-miR-6810-5p 1 1 0
chr12:6536690|6536985 hsa-miR-6786-5p 1 0 0
chr12:6536690|6536985 hsa-miR-1226-5p 1 0 0
chr12:6536690|6536985 hsa-miR-6834-5p 0 1 0
chr12:6536690|6536985 hsa-miR-4743-3p 0 1 0
chr12:6536690|6536985 hsa-miR-4787-5p 1 0 0
chr12:6536690|6536985 hsa-miR-1266-3p 0 1 0
chr12:6536690|6536985 hsa-miR-149-3p 1 0 0
chr12:6536690|6536985 hsa-miR-6785-3p 0 1 0
chr12:6536690|6536985 hsa-miR-6814-5p 0 1 0
chr12:6536690|6536985 hsa-miR-449b-3p 0 1 0
chr12:6536690|6536985 hsa-miR-2116-5p 0 1 0
chr12:6536690|6536985 hsa-miR-6888-3p 0 1 0
chr12:6536690|6536985 hsa-miR-3680-5p 0 1 0
chr12:6536690|6536985 hsa-miR-6769b-5p 1 0 0
chr12:6536690|6536985 hsa-miR-6812-5p 1 1 0
chr12:6536690|6536985 hsa-miR-6816-5p 1 0 0
chr12:6536690|6536985 hsa-miR-6870-5p 1 1 0
chr12:6536690|6536985 hsa-miR-6726-5p 1 0 0
chr12:6536690|6536985 hsa-miR-6743-5p 1 0 0
chr12:6536690|6536985 hsa-miR-6752-5p 1 1 0
chr12:6536690|6536985 hsa-miR-6756-5p 1 1 0
chr12:6536690|6536985 hsa-miR-6803-5p 1 1 0
chr12:6536690|6536985 hsa-miR-6819-5p 1 0 0
chr12:6536690|6536985 hsa-miR-6851-5p 1 0 0
chr12:6536690|6536985 hsa-miR-7110-5p 1 1 0
chr12:6536690|6536985 hsa-miR-1249-5p 1 0 0
chr12:6536690|6536985 hsa-miR-6722-3p 1 0 0
chr12:6536690|6536985 hsa-miR-6751-5p 1 1 0
chr12:6536690|6536985 hsa-miR-6797-5p 1 0 0
chr12:6536690|6536985 hsa-miR-6875-5p 0 1 0
chr12:6536690|6536985 hsa-miR-7111-5p 1 1 0
chr12:6536690|6536985 hsa-miR-5196-5p 1 0 0
chr12:6536690|6536985 hsa-miR-328-5p 1 0 0
chr12:6536690|6536985 hsa-miR-4749-5p 1 0 0
chr12:6536690|6536985 hsa-miR-6795-5p 1 1 0
chr12:6536690|6536985 hsa-miR-6846-5p 1 0 0
chr12:6536690|6536985 hsa-miR-6848-5p 1 0 0
chr12:6536690|6536985 hsa-miR-6887-5p 1 1 0
chr12:6536690|6536985 hsa-miR-4723-5p 0 1 0
chr12:6536690|6536985 hsa-miR-939-5p 1 0 0
chr12:6536690|6536985 hsa-miR-3085-5p 1 1 0
chr12:6536690|6536985 hsa-miR-6731-5p 1 0 0
chr12:6536690|6536985 hsa-miR-1914-3p 1 0 0
chr12:6536690|6536985 hsa-miR-6766-5p 1 1 0
chr12:6536690|6536985 hsa-miR-6762-5p 1 0 0
chr12:6536690|6536985 hsa-miR-769-3p 1 0 0
chr12:6536690|6536985 hsa-miR-10397-5p 0 1 0
chr12:6536690|6536985 hsa-miR-7162-5p 1 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr12:6536690|6536985
ORF Type ORF1
Protein Length 34
Nucleotide Length 105
Protein Sequence MFQYDSTHGKFHGTVKAENGKLVINGNPITIFQE
Nucleotide Sequence ATGTTCCAATATGATTCCACCCATGGCAAATTCCATGGCACCGTCAAGGCTGAGAACGGGAAGCTTGTCATCAATGGAAATCCCATCACCATCTTCCAGGAGTGA
CircID chr12:6536690|6536985
ORF Type ORF2
Protein Length 59
Nucleotide Length 177
Protein Sequence MEEMCFGEATRMVWLPWVYGNLVSLNMVLSPSPPHPHRRDPSKIKWGDAGAEYVVESTG
Nucleotide Sequence ATGGAAGAAATGTGCTTTGGGGAGGCAACTAGGATGGTGTGGCTCCCTTGGGTATATGGTAACCTTGTGTCCCTCAATATGGTCCTGTCCCCATCTCCCCCCCACCCCCATAGGCGAGATCCCTCCAAAATCAAGTGGGGCGATGCTGGCGCTGAGTACGTCGTGGAGTCCACTGGC
CircID chr12:6536690|6536985
ORF Type ORF3
Protein Length 95
Nucleotide Length 285
Protein Sequence MIPPMANSMAPSRLRTGSLSSMEIPSPSSRSEWKTEWKKCALGRQLGWCGSLGYMVTLCPSIWSCPHLPPTPIGEIPPKSSGAMLALSTSWSPLA
Nucleotide Sequence ATGATTCCACCCATGGCAAATTCCATGGCACCGTCAAGGCTGAGAACGGGAAGCTTGTCATCAATGGAAATCCCATCACCATCTTCCAGGAGTGAGTGGAAGACAGAATGGAAGAAATGTGCTTTGGGGAGGCAACTAGGATGGTGTGGCTCCCTTGGGTATATGGTAACCTTGTGTCCCTCAATATGGTCCTGTCCCCATCTCCCCCCCACCCCCATAGGCGAGATCCCTCCAAAATCAAGTGGGGCGATGCTGGCGCTGAGTACGTCGTGGAGTCCACTGGCG
CircID chr12:6536690|6536985
ORF Type ORF4
Protein Length 83
Nucleotide Length 249
Protein Sequence MILEGSRLWGWGGDGDRTILRDTRLPYTQGSHTILVASPKHISSILSSTHSWKMVMGFPLMTSFPFSALTVPWNLPWVESYWN
Nucleotide Sequence TTGATTTTGGAGGGATCTCGCCTATGGGGGTGGGGGGGAGATGGGGACAGGACCATATTGAGGGACACAAGGTTACCATATACCCAAGGGAGCCACACCATCCTAGTTGCCTCCCCAAAGCACATTTCTTCCATTCTGTCTTCCACTCACTCCTGGAAGATGGTGATGGGATTTCCATTGATGACAAGCTTCCCGTTCTCAGCCTTGACGGTGCCATGGAATTTGCCATGGGTGGAATCATATTGGAAC
CircID chr12:6536690|6536985
ORF Type ORF5
Protein Length 76
Nucleotide Length 228
Protein Sequence MGVGGRWGQDHIEGHKVTIYPREPHHPSCLPKAHFFHSVFHSLLEDGDGISIDDKLPVLSLDGAMEFAMGGIILEH
Nucleotide Sequence ATGGGGGTGGGGGGGAGATGGGGACAGGACCATATTGAGGGACACAAGGTTACCATATACCCAAGGGAGCCACACCATCCTAGTTGCCTCCCCAAAGCACATTTCTTCCATTCTGTCTTCCACTCACTCCTGGAAGATGGTGATGGGATTTCCATTGATGACAAGCTTCCCGTTCTCAGCCTTGACGGTGCCATGGAATTTGCCATGGGTGGAATCATATTGGAACAT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab