CircRNA Information

General Information
circRNA Basic Information
CircID chr12:6537324|6537684
Strand -
CircType exon
Host Gene ENSG00000111640.13;
Algorism CIRI2;
Sequence CACCAACTGCTTAGCACCCCTGGCCAAGGTCATCCATGACAACTTTGGTATCGTGGAAGGACTCATGGTATGAGAGCTGGGGAATGGGACTGAGGCTCCCACCTTTCTCATCCAAGACTGGCTCCTCCCTGCCGGGGCTGCGTGCAACCCTGGGGTTGGGGGTTCTGGGGACTGGCTTTCCCATAATTTCCTTTCAAGGTGGGGAGGGAGGTAGAGGGGTGATGTGGGGAGTACGCTGCAGGGCCTCACTCCTTTTGCAGACCACAGTCCATGCCATCACTGCCACCCAGAAGACTGTGGATGGCCCCTCCGGGAAACTGTGGCGTGATGGCCGCGGGGCTCTCCAGAACATCATCCCTGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:6537324|6537684 hsa-miR-34a-5p 0 0 1
chr12:6537324|6537684 hsa-miR-34a-3p 0 0 1
chr12:6537324|6537684 hsa-miR-185-5p 0 0 1
chr12:6537324|6537684 hsa-miR-185-3p 0 0 1
chr12:6537324|6537684 hsa-miR-382-5p 0 0 1
chr12:6537324|6537684 hsa-miR-382-3p 0 0 1
chr12:6537324|6537684 hsa-miR-449a 0 0 1
chr12:6537324|6537684 hsa-miR-488-5p 0 0 1
chr12:6537324|6537684 hsa-miR-488-3p 0 0 1
chr12:6537324|6537684 hsa-miR-432-5p 0 0 1
chr12:6537324|6537684 hsa-miR-432-3p 0 0 1
chr12:6537324|6537684 hsa-miR-539-5p 0 0 1
chr12:6537324|6537684 hsa-miR-539-3p 0 0 1
chr12:6537324|6537684 hsa-miR-575 0 0 1
chr12:6537324|6537684 hsa-miR-588 0 0 1
chr12:6537324|6537684 hsa-miR-449b-5p 0 0 1
chr12:6537324|6537684 hsa-miR-449b-3p 0 0 1
chr12:6537324|6537684 hsa-miR-765 0 0 1
chr12:6537324|6537684 hsa-miR-920 0 0 1
chr12:6537324|6537684 hsa-miR-1291 0 0 1
chr12:6537324|6537684 hsa-miR-1293 0 0 1
chr12:6537324|6537684 hsa-miR-1299 0 0 1
chr12:6537324|6537684 hsa-miR-1255a 0 0 1
chr12:6537324|6537684 hsa-miR-1288-5p 0 0 1
chr12:6537324|6537684 hsa-miR-1288-3p 0 0 1
chr12:6537324|6537684 hsa-miR-1321 0 0 1
chr12:6537324|6537684 hsa-miR-1225-3p 0 0 1
chr12:6537324|6537684 hsa-miR-296-3p 0 0 1
chr12:6537324|6537684 hsa-miR-1184 0 0 1
chr12:6537324|6537684 hsa-miR-423-5p 0 0 1
chr12:6537324|6537684 hsa-miR-1224-3p 0 0 1
chr12:6537324|6537684 hsa-miR-490-5p 0 0 1
chr12:6537324|6537684 hsa-miR-1207-5p 1 0 1
chr12:6537324|6537684 hsa-miR-342-5p 0 0 1
chr12:6537324|6537684 hsa-miR-455-3p 0 0 1
chr12:6537324|6537684 hsa-miR-34c-5p 0 0 1
chr12:6537324|6537684 hsa-miR-1255b 0 0 1
chr12:6537324|6537684 hsa-miR-1269 0 0 1
chr12:6537324|6537684 hsa-miR-516b 0 0 1
chr12:6537324|6537684 hsa-miR-499-3p 0 0 1
chr12:6537324|6537684 hsa-miR-608 0 1 0
chr12:6537324|6537684 hsa-miR-298 0 1 0
chr12:6537324|6537684 hsa-miR-3138 1 0 0
chr12:6537324|6537684 hsa-miR-3153 0 1 0
chr12:6537324|6537684 hsa-miR-4254 1 0 0
chr12:6537324|6537684 hsa-miR-3936 1 0 0
chr12:6537324|6537684 hsa-miR-4441 0 1 0
chr12:6537324|6537684 hsa-miR-4489 1 0 0
chr12:6537324|6537684 hsa-miR-4527 0 1 0
chr12:6537324|6537684 hsa-miR-4656 1 0 0
chr12:6537324|6537684 hsa-miR-4706 1 0 0
chr12:6537324|6537684 hsa-miR-4739 1 0 0
chr12:6537324|6537684 hsa-miR-8073 0 1 0
chr12:6537324|6537684 hsa-miR-12122 0 1 0
chr12:6537324|6537684 hsa-miR-4433b-3p 0 1 0
chr12:6537324|6537684 hsa-miR-4747-3p 1 0 0
chr12:6537324|6537684 hsa-miR-212-5p 0 1 0
chr12:6537324|6537684 hsa-miR-7106-5p 1 0 0
chr12:6537324|6537684 hsa-miR-6894-5p 1 0 0
chr12:6537324|6537684 hsa-miR-210-5p 1 0 0
chr12:6537324|6537684 hsa-miR-1227-5p 1 0 0
chr12:6537324|6537684 hsa-miR-6744-5p 0 1 0
chr12:6537324|6537684 hsa-miR-6730-5p 0 1 0
chr12:6537324|6537684 hsa-miR-3187-3p 1 0 0
chr12:6537324|6537684 hsa-miR-6776-5p 1 0 0
chr12:6537324|6537684 hsa-miR-4725-5p 1 0 0
chr12:6537324|6537684 hsa-miR-6798-5p 1 0 0
chr12:6537324|6537684 hsa-miR-6782-5p 0 1 0
chr12:6537324|6537684 hsa-miR-5008-5p 0 1 0
chr12:6537324|6537684 hsa-miR-6884-3p 0 1 0
chr12:6537324|6537684 hsa-miR-6786-5p 1 0 0
chr12:6537324|6537684 hsa-miR-6763-3p 0 1 0
chr12:6537324|6537684 hsa-miR-542-5p 1 0 0
chr12:6537324|6537684 hsa-miR-4640-5p 1 0 0
chr12:6537324|6537684 hsa-miR-3162-5p 1 0 0
chr12:6537324|6537684 hsa-miR-4707-5p 0 1 0
chr12:6537324|6537684 hsa-miR-6743-3p 1 0 0
chr12:6537324|6537684 hsa-miR-6785-3p 0 1 0
chr12:6537324|6537684 hsa-miR-6887-3p 0 1 0
chr12:6537324|6537684 hsa-miR-6793-3p 0 1 0
chr12:6537324|6537684 hsa-miR-6752-3p 1 0 0
chr12:6537324|6537684 hsa-miR-2355-5p 0 1 0
chr12:6537324|6537684 hsa-miR-6508-3p 0 1 0
chr12:6537324|6537684 hsa-miR-4529-5p 0 1 0
chr12:6537324|6537684 hsa-miR-4649-3p 1 0 0
chr12:6537324|6537684 hsa-miR-6802-3p 0 1 0
chr12:6537324|6537684 hsa-miR-6851-3p 1 0 0
chr12:6537324|6537684 hsa-miR-3173-5p 0 1 0
chr12:6537324|6537684 hsa-miR-6846-3p 0 1 0
chr12:6537324|6537684 hsa-miR-6731-3p 1 0 0
chr12:6537324|6537684 hsa-miR-4763-3p 1 0 0
chr12:6537324|6537684 hsa-miR-6812-5p 1 0 0
chr12:6537324|6537684 hsa-miR-6737-5p 1 0 0
chr12:6537324|6537684 hsa-miR-6743-5p 1 0 0
chr12:6537324|6537684 hsa-miR-6754-5p 0 1 0
chr12:6537324|6537684 hsa-miR-6756-5p 1 0 0
chr12:6537324|6537684 hsa-miR-11181-3p 0 1 0
chr12:6537324|6537684 hsa-miR-6779-5p 1 0 0
chr12:6537324|6537684 hsa-miR-6808-5p 1 0 0
chr12:6537324|6537684 hsa-miR-4685-3p 0 1 0
chr12:6537324|6537684 hsa-miR-1915-3p 0 1 0
chr12:6537324|6537684 hsa-miR-3620-5p 1 0 0
chr12:6537324|6537684 hsa-miR-10396b-5p 1 0 0
chr12:6537324|6537684 hsa-miR-4745-3p 1 0 0
chr12:6537324|6537684 hsa-miR-6795-5p 1 0 0
chr12:6537324|6537684 hsa-miR-6887-5p 1 0 0
chr12:6537324|6537684 hsa-miR-4723-5p 1 0 0
chr12:6537324|6537684 hsa-miR-939-5p 1 0 0
chr12:6537324|6537684 hsa-miR-1238-5p 1 0 0
chr12:6537324|6537684 hsa-miR-6799-3p 1 0 0
chr12:6537324|6537684 hsa-miR-1914-3p 1 0 0
chr12:6537324|6537684 hsa-miR-6766-5p 0 1 0
chr12:6537324|6537684 hsa-miR-6785-5p 1 0 0
chr12:6537324|6537684 hsa-miR-6762-5p 0 1 0
chr12:6537324|6537684 hsa-miR-6805-3p 1 0 0
chr12:6537324|6537684 hsa-miR-6775-3p 1 0 0
chr12:6537324|6537684 hsa-miR-4723-3p 0 1 0
chr12:6537324|6537684 hsa-miR-483-3p 1 0 0
chr12:6537324|6537684 hsa-miR-6511b-3p 1 0 0
chr12:6537324|6537684 hsa-miR-6819-3p 1 0 0
chr12:6537324|6537684 hsa-miR-6823-3p 0 1 0
chr12:6537324|6537684 hsa-miR-4756-5p 0 1 0
chr12:6537324|6537684 hsa-miR-4676-5p 0 1 0
chr12:6537324|6537684 hsa-miR-6764-5p 0 1 0
chr12:6537324|6537684 hsa-miR-6797-3p 1 0 0
chr12:6537324|6537684 hsa-miR-1255b-5p 0 1 0
chr12:6537324|6537684 hsa-miR-6733-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr12:6537324|6537684
ORF Type ORF1
Protein Length 30
Nucleotide Length 90
Protein Sequence MPSLPPRRLWMAPPGNCGVMAAGLSRTSSL
Nucleotide Sequence ATGCCATCACTGCCACCCAGAAGACTGTGGATGGCCCCTCCGGGAAACTGTGGCGTGATGGCCGCGGGGCTCTCCAGAACATCATCCCTG

CircID chr12:6537324|6537684
ORF Type ORF2
Protein Length 45
Nucleotide Length 138
Protein Sequence MGNGTEAPTFLIQDWLLPAGAACNPGVGGSGDWLSHNFLSRWGGR
Nucleotide Sequence CTGGGGAATGGGACTGAGGCTCCCACCTTTCTCATCCAAGACTGGCTCCTCCCTGCCGGGGCTGCGTGCAACCCTGGGGTTGGGGGTTCTGGGGACTGGCTTTCCCATAATTTCCTTTCAAGGTGGGGAGGGAGGTAG

CircID chr12:6537324|6537684
ORF Type ORF3
Protein Length 30
Nucleotide Length 93
Protein Sequence MQGLTPFADHSPCHHCHPEDCGWPLRETVA
Nucleotide Sequence CTGCAGGGCCTCACTCCTTTTGCAGACCACAGTCCATGCCATCACTGCCACCCAGAAGACTGTGGATGGCCCCTCCGGGAAACTGTGGCGTGA

CircID chr12:6537324|6537684
ORF Type ORF4
Protein Length 108
Nucleotide Length 324
Protein Sequence MTTLVSWKDSWYESWGMGLRLPPFSSKTGSSLPGLRATLGLGVLGTGFPIISFQGGEGGRGVMWGVRCRASLLLQTTVHAITATQKTVDGPSGKLWRDGRGALQNIIP
Nucleotide Sequence ATGACAACTTTGGTATCGTGGAAGGACTCATGGTATGAGAGCTGGGGAATGGGACTGAGGCTCCCACCTTTCTCATCCAAGACTGGCTCCTCCCTGCCGGGGCTGCGTGCAACCCTGGGGTTGGGGGTTCTGGGGACTGGCTTTCCCATAATTTCCTTTCAAGGTGGGGAGGGAGGTAGAGGGGTGATGTGGGGAGTACGCTGCAGGGCCTCACTCCTTTTGCAGACCACAGTCCATGCCATCACTGCCACCCAGAAGACTGTGGATGGCCCCTCCGGGAAACTGTGGCGTGATGGCCGCGGGGCTCTCCAGAACATCATCCCT

CircID chr12:6537324|6537684
ORF Type ORF5
Protein Length 53
Nucleotide Length 162
Protein Sequence MMFWRAPRPSRHSFPEGPSTVFWVAVMAWTVVCKRSEALQRTPHITPLPPSPP
Nucleotide Sequence ATGATGTTCTGGAGAGCCCCGCGGCCATCACGCCACAGTTTCCCGGAGGGGCCATCCACAGTCTTCTGGGTGGCAGTGATGGCATGGACTGTGGTCTGCAAAAGGAGTGAGGCCCTGCAGCGTACTCCCCACATCACCCCTCTACCTCCCTCCCCACCTTGA

CircID chr12:6537324|6537684
ORF Type ORF6
Protein Length 57
Nucleotide Length 174
Protein Sequence MGKPVPRTPNPRVARSPGREEPVLDEKGGSLSPIPQLSYHESFHDTKVVMDDLGQGC
Nucleotide Sequence ATGGGAAAGCCAGTCCCCAGAACCCCCAACCCCAGGGTTGCACGCAGCCCCGGCAGGGAGGAGCCAGTCTTGGATGAGAAAGGTGGGAGCCTCAGTCCCATTCCCCAGCTCTCATACCATGAGTCCTTCCACGATACCAAAGTTGTCATGGATGACCTTGGCCAGGGGTGCTAA

CircID chr12:6537324|6537684
ORF Type ORF7
Protein Length 89
Nucleotide Length 267
Protein Sequence MWSAKGVRPCSVLPTSPLYLPPHLERKLWESQSPEPPTPGLHAAPAGRSQSWMRKVGASVPFPSSHTMSPSTIPKLSWMTLARGAKQLV
Nucleotide Sequence CTGTGGTCTGCAAAAGGAGTGAGGCCCTGCAGCGTACTCCCCACATCACCCCTCTACCTCCCTCCCCACCTTGAAAGGAAATTATGGGAAAGCCAGTCCCCAGAACCCCCAACCCCAGGGTTGCACGCAGCCCCGGCAGGGAGGAGCCAGTCTTGGATGAGAAAGGTGGGAGCCTCAGTCCCATTCCCCAGCTCTCATACCATGAGTCCTTCCACGATACCAAAGTTGTCATGGATGACCTTGGCCAGGGGTGCTAAGCAGTTGGTG

CircID chr12:6537324|6537684
ORF Type ORF8
Protein Length 33
Nucleotide Length 102
Protein Sequence MESPAAITPQFPGGAIHSLLGGSDGMDCGLQKE
Nucleotide Sequence CTGGAGAGCCCCGCGGCCATCACGCCACAGTTTCCCGGAGGGGCCATCCACAGTCTTCTGGGTGGCAGTGATGGCATGGACTGTGGTCTGCAAAAGGAGTGA

CircID chr12:6537324|6537684
ORF Type ORF9
Protein Length 29
Nucleotide Length 90
Protein Sequence MKGNYGKASPQNPQPQGCTQPRQGGASLG
Nucleotide Sequence TTGAAAGGAAATTATGGGAAAGCCAGTCCCCAGAACCCCCAACCCCAGGGTTGCACGCAGCCCCGGCAGGGAGGAGCCAGTCTTGGATGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites