CircRNA Information

General Information
circRNA Basic Information
CircID chr12:6570582|6570888
Strand +
CircType exon
Host Gene ENSG00000111642.13;
Algorism CIRI2;
Sequence CCGAACCTACCCCACAGCAGGTAGGACCATTTTCTTCTTGACACCACCTCTTCCTGCAGAACCATTCTGGAGCTTGTAACTTTGCTGTATGTCCCTAGCTTTACATACTGGGTGGGTGGCCTATCAGTGAATTCCCTTGAGATTGGGTGGATTCCTATCATCTGGAATTCTGACTCCTCGGGTCTCCTTCTCTAGGTAGCCCAGCAGCAGTGAAGATGCAGACTGATACCACCTCCACCGCTGAGCAGTGACCTTCCTCACTTTCTCTTGTCCCAGCTTCTCCCCTGGGGGCCTGAGAGACCCTCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:6570582|6570888 hsa-miR-216a-5p 0 0 1
chr12:6570582|6570888 hsa-miR-216a-3p 0 0 1
chr12:6570582|6570888 hsa-miR-320a-5p 0 0 1
chr12:6570582|6570888 hsa-miR-320a-3p 0 0 1
chr12:6570582|6570888 hsa-miR-370-5p 0 0 1
chr12:6570582|6570888 hsa-miR-370-3p 0 0 1
chr12:6570582|6570888 hsa-miR-380-5p 0 0 1
chr12:6570582|6570888 hsa-miR-380-3p 0 0 1
chr12:6570582|6570888 hsa-miR-412-5p 0 0 1
chr12:6570582|6570888 hsa-miR-412-3p 0 0 1
chr12:6570582|6570888 hsa-miR-493-5p 0 0 1
chr12:6570582|6570888 hsa-miR-493-3p 0 0 1
chr12:6570582|6570888 hsa-miR-522-5p 0 0 1
chr12:6570582|6570888 hsa-miR-522-3p 0 0 1
chr12:6570582|6570888 hsa-miR-545-5p 0 0 1
chr12:6570582|6570888 hsa-miR-545-3p 0 0 1
chr12:6570582|6570888 hsa-miR-622 0 0 1
chr12:6570582|6570888 hsa-miR-1182 0 0 1
chr12:6570582|6570888 hsa-miR-1205 0 0 1
chr12:6570582|6570888 hsa-miR-1286 0 0 1
chr12:6570582|6570888 hsa-miR-1266-5p 0 0 1
chr12:6570582|6570888 hsa-miR-1266-3p 0 0 1
chr12:6570582|6570888 hsa-miR-513c-5p 0 0 1
chr12:6570582|6570888 hsa-miR-513c-3p 0 0 1
chr12:6570582|6570888 hsa-miR-491-5p 0 0 1
chr12:6570582|6570888 hsa-miR-1184 0 0 1
chr12:6570582|6570888 hsa-miR-525-5p 0 0 1
chr12:6570582|6570888 hsa-miR-361-3p 0 1 1
chr12:6570582|6570888 hsa-miR-767-3p 0 0 1
chr12:6570582|6570888 hsa-miR-520a-5p 0 0 1
chr12:6570582|6570888 hsa-miR-320b 1 1 1
chr12:6570582|6570888 hsa-miR-320c 1 1 1
chr12:6570582|6570888 hsa-miR-1302 0 0 1
chr12:6570582|6570888 hsa-miR-320d 1 0 1
chr12:6570582|6570888 hsa-miR-151-5p 0 0 1
chr12:6570582|6570888 hsa-miR-544 0 0 1
chr12:6570582|6570888 hsa-miR-923 0 0 1
chr12:6570582|6570888 hsa-miR-608 1 1 0
chr12:6570582|6570888 hsa-miR-151b 0 1 0
chr12:6570582|6570888 hsa-miR-765 1 0 0
chr12:6570582|6570888 hsa-miR-1183 1 0 0
chr12:6570582|6570888 hsa-miR-1208 1 0 0
chr12:6570582|6570888 hsa-miR-3122 1 1 0
chr12:6570582|6570888 hsa-miR-3153 0 1 0
chr12:6570582|6570888 hsa-miR-3154 0 1 0
chr12:6570582|6570888 hsa-miR-3155a 0 1 0
chr12:6570582|6570888 hsa-miR-3185 1 1 0
chr12:6570582|6570888 hsa-miR-320e 1 1 0
chr12:6570582|6570888 hsa-miR-4298 1 1 0
chr12:6570582|6570888 hsa-miR-4321 1 0 0
chr12:6570582|6570888 hsa-miR-4271 1 0 0
chr12:6570582|6570888 hsa-miR-378g 1 0 0
chr12:6570582|6570888 hsa-miR-4428 0 1 0
chr12:6570582|6570888 hsa-miR-4429 0 1 0
chr12:6570582|6570888 hsa-miR-3135b 1 0 0
chr12:6570582|6570888 hsa-miR-3974 0 1 0
chr12:6570582|6570888 hsa-miR-4647 0 1 0
chr12:6570582|6570888 hsa-miR-4651 1 0 0
chr12:6570582|6570888 hsa-miR-4739 1 0 0
chr12:6570582|6570888 hsa-miR-4784 0 1 0
chr12:6570582|6570888 hsa-miR-5703 1 1 0
chr12:6570582|6570888 hsa-miR-5704 0 1 0
chr12:6570582|6570888 hsa-miR-5787 1 0 0
chr12:6570582|6570888 hsa-miR-6134 0 1 0
chr12:6570582|6570888 hsa-miR-8089 1 0 0
chr12:6570582|6570888 hsa-miR-12114 1 0 0
chr12:6570582|6570888 hsa-miR-12127 1 0 0
chr12:6570582|6570888 hsa-miR-4433b-3p 1 0 0
chr12:6570582|6570888 hsa-miR-6825-5p 1 0 0
chr12:6570582|6570888 hsa-miR-6799-5p 1 0 0
chr12:6570582|6570888 hsa-miR-1227-5p 1 0 0
chr12:6570582|6570888 hsa-miR-6089 1 0 0
chr12:6570582|6570888 hsa-miR-6746-5p 1 0 0
chr12:6570582|6570888 hsa-miR-6727-5p 1 0 0
chr12:6570582|6570888 hsa-miR-6742-5p 0 1 0
chr12:6570582|6570888 hsa-miR-6796-5p 0 1 0
chr12:6570582|6570888 hsa-miR-6829-5p 1 1 0
chr12:6570582|6570888 hsa-miR-6732-5p 1 0 0
chr12:6570582|6570888 hsa-miR-6798-5p 1 0 0
chr12:6570582|6570888 hsa-miR-1224-5p 1 0 0
chr12:6570582|6570888 hsa-miR-6760-5p 1 1 0
chr12:6570582|6570888 hsa-miR-6782-5p 1 0 0
chr12:6570582|6570888 hsa-miR-6810-5p 1 0 0
chr12:6570582|6570888 hsa-miR-5008-5p 0 1 0
chr12:6570582|6570888 hsa-miR-1226-5p 1 0 0
chr12:6570582|6570888 hsa-miR-4640-5p 1 0 0
chr12:6570582|6570888 hsa-miR-4732-5p 1 0 0
chr12:6570582|6570888 hsa-miR-7854-3p 1 0 0
chr12:6570582|6570888 hsa-miR-4787-5p 1 0 0
chr12:6570582|6570888 hsa-miR-6824-5p 1 1 0
chr12:6570582|6570888 hsa-miR-6878-5p 0 1 0
chr12:6570582|6570888 hsa-miR-664b-5p 1 0 0
chr12:6570582|6570888 hsa-miR-3120-3p 0 1 0
chr12:6570582|6570888 hsa-miR-1307-3p 1 0 0
chr12:6570582|6570888 hsa-miR-4746-3p 1 0 0
chr12:6570582|6570888 hsa-miR-1295b-3p 0 1 0
chr12:6570582|6570888 hsa-miR-6837-3p 0 1 0
chr12:6570582|6570888 hsa-miR-6895-3p 0 1 0
chr12:6570582|6570888 hsa-miR-4717-5p 1 1 0
chr12:6570582|6570888 hsa-miR-10400-5p 1 0 0
chr12:6570582|6570888 hsa-miR-1273h-5p 1 0 0
chr12:6570582|6570888 hsa-miR-4763-3p 1 0 0
chr12:6570582|6570888 hsa-miR-6865-5p 1 0 0
chr12:6570582|6570888 hsa-miR-6775-5p 1 0 0
chr12:6570582|6570888 hsa-miR-6737-5p 1 0 0
chr12:6570582|6570888 hsa-miR-6752-5p 1 0 0
chr12:6570582|6570888 hsa-miR-6756-5p 1 0 0
chr12:6570582|6570888 hsa-miR-6803-5p 1 0 0
chr12:6570582|6570888 hsa-miR-6815-5p 1 0 0
chr12:6570582|6570888 hsa-miR-6819-5p 1 0 0
chr12:6570582|6570888 hsa-miR-6851-5p 1 1 0
chr12:6570582|6570888 hsa-miR-7110-5p 1 0 0
chr12:6570582|6570888 hsa-miR-11181-3p 1 0 0
chr12:6570582|6570888 hsa-miR-6788-5p 1 0 0
chr12:6570582|6570888 hsa-miR-6797-5p 1 0 0
chr12:6570582|6570888 hsa-miR-7111-5p 1 0 0
chr12:6570582|6570888 hsa-miR-5196-5p 1 1 0
chr12:6570582|6570888 hsa-miR-6780b-5p 1 0 0
chr12:6570582|6570888 hsa-miR-328-5p 1 0 0
chr12:6570582|6570888 hsa-miR-4685-5p 1 0 0
chr12:6570582|6570888 hsa-miR-4725-3p 1 0 0
chr12:6570582|6570888 hsa-miR-4726-5p 1 0 0
chr12:6570582|6570888 hsa-miR-6777-5p 1 0 0
chr12:6570582|6570888 hsa-miR-6795-5p 1 0 0
chr12:6570582|6570888 hsa-miR-6858-5p 1 0 0
chr12:6570582|6570888 hsa-miR-6889-5p 0 1 0
chr12:6570582|6570888 hsa-miR-4723-5p 1 0 0
chr12:6570582|6570888 hsa-miR-6831-5p 1 0 0
chr12:6570582|6570888 hsa-miR-939-5p 1 0 0
chr12:6570582|6570888 hsa-miR-6511b-5p 1 0 0
chr12:6570582|6570888 hsa-miR-6856-5p 1 0 0
chr12:6570582|6570888 hsa-miR-4646-5p 1 0 0
chr12:6570582|6570888 hsa-miR-6791-5p 1 0 0
chr12:6570582|6570888 hsa-miR-3130-5p 0 1 0
chr12:6570582|6570888 hsa-miR-4768-5p 0 1 0
chr12:6570582|6570888 hsa-miR-6848-3p 1 1 0
chr12:6570582|6570888 hsa-miR-151a-5p 0 1 0
chr12:6570582|6570888 hsa-miR-4482-5p 0 1 0
chr12:6570582|6570888 hsa-miR-6506-5p 1 0 0
chr12:6570582|6570888 hsa-miR-514b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr12:6570582|6570888
ORF Type ORF1
Protein Length 42
Nucleotide Length 129
Protein Sequence MELVTLLYVPSFTYWVGGLSVNSLEIGWIPIIWNSDSSGLLL
Nucleotide Sequence CTGGAGCTTGTAACTTTGCTGTATGTCCCTAGCTTTACATACTGGGTGGGTGGCCTATCAGTGAATTCCCTTGAGATTGGGTGGATTCCTATCATCTGGAATTCTGACTCCTCGGGTCTCCTTCTCTAG

CircID chr12:6570582|6570888
ORF Type ORF2
Protein Length 28
Nucleotide Length 84
Protein Sequence MIPPPPLSSDLPHFLLSQLLPWGPERPS
Nucleotide Sequence CTGATACCACCTCCACCGCTGAGCAGTGACCTTCCTCACTTTCTCTTGTCCCAGCTTCTCCCCTGGGGGCCTGAGAGACCCTCA

CircID chr12:6570582|6570888
ORF Type ORF3
Protein Length 50
Nucleotide Length 153
Protein Sequence MGQEKVRKVTAQRWRWYQSASSLLLGYLEKETRGVRIPDDRNPPNLKGIH
Nucleotide Sequence CTGGGACAAGAGAAAGTGAGGAAGGTCACTGCTCAGCGGTGGAGGTGGTATCAGTCTGCATCTTCACTGCTGCTGGGCTACCTAGAGAAGGAGACCCGAGGAGTCAGAATTCCAGATGATAGGAATCCACCCAATCTCAAGGGAATTCACTGA

CircID chr12:6570582|6570888
ORF Type ORF4
Protein Length 53
Nucleotide Length 159
Protein Sequence MIGIHPISREFTDRPPTQYVKLGTYSKVTSSRMVLQEEVVSRRKWSYLLWGRF
Nucleotide Sequence ATGATAGGAATCCACCCAATCTCAAGGGAATTCACTGATAGGCCACCCACCCAGTATGTAAAGCTAGGGACATACAGCAAAGTTACAAGCTCCAGAATGGTTCTGCAGGAAGAGGTGGTGTCAAGAAGAAAATGGTCCTACCTGCTGTGGGGTAGGTTC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites