CircNet

General Information

circRNA Basic Information

CircID	chr12:66392308\|66432628
Strand	-
CircType	exon
Host Gene	ENSG00000155974.11;
Algorism	find_circ;CIRI2;DCC;
Sequence	AGTCTGTCATCCCAAGTAGTGGAACATTTCATGTAAAGCTGCCTAAGAAGCACAATGTGGAACTTGGAATAACCATAAGTTCACCATCCAGTAGAAAACCAGGAGACCCCCTCGTCATTTCAGATATCAAGAAAGGGAGTGTGGCACACAGCTCTTTCAATGATATGAAGTTAAAACCAGAACTGGGACCCTGGAACTTGGGGATAAATTGCTCGCAATAGATAATATCCGGCTGGACAACTGTTCCATGGAAGATGCAGTTCAGATCCTCCAGCAATGTGAAGACCTGGTGAAGCTCAAAATCCGCAAAGATGAAGATAATTCAGATGAGCAAGAAAGTTCCGGAGCAATTATTTACACCGTGGAGCTTAAACGCTACGGGGGGCCCCTTGGCATCACAATTTCAGGAACTGAAGAGCCGTTTGATCCTATAATCATTTCAAGCCTCACTAAAGGGGGATTAGCTGAAAGAACTGGCGCAATCCACATAGGAGACCGAATCCTAGCCATCAATAGCAGCAGCTTGAAAGGGAAGCCTCTGAGTGAAGCCATCCATTTGTTACAGATGGCAGGAGAGACTGTCACCTTGAAAATTAAGAAACAGACAGATGGATACTTAAACTCCTTTCCTGTCTATAAAGCCCAGTCAGCATCGAGCCCCAAGAAGTTCCCTATTTCTAGCCATTTGAGTGACCTGGGGGATGTGGAGGAGGACTCCTCACCAGCACAGAAGCCAGGCAAGCTCTCCGACATGTACCCCTCCACGGTGCCCAGTGTGGACAGTGCTGTGGATTCATGGGATGGGTCTGCAATAGACACCAGCTATGGAACTCAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	miRanda	targetScan
chr12:66392308\|66432628	hsa-miR-127-5p	1	1
chr12:66392308\|66432628	hsa-miR-122-5p	1	1
chr12:66392308\|66432628	hsa-miR-22-3p	1	1
chr12:66392308\|66432628	hsa-miR-205-3p	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr12:66392308\|66432628
ORF Type	ORF1
Protein Length	196
Nucleotide Length	588
Protein Sequence	MEDAVQILQQCEDLVKLKIRKDEDNSDEQESSGAIIYTVELKRYGGPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKKQTDGYLNSFPVYKAQSASSPKKFPISSHLSDLGDVEEDSSPAQKPGKLSDMYPSTVPSVDSAVDSWDGSAIDTSYGTQ
Nucleotide Sequence	ATGGAAGATGCAGTTCAGATCCTCCAGCAATGTGAAGACCTGGTGAAGCTCAAAATCCGCAAAGATGAAGATAATTCAGATGAGCAAGAAAGTTCCGGAGCAATTATTTACACCGTGGAGCTTAAACGCTACGGGGGGCCCCTTGGCATCACAATTTCAGGAACTGAAGAGCCGTTTGATCCTATAATCATTTCAAGCCTCACTAAAGGGGGATTAGCTGAAAGAACTGGCGCAATCCACATAGGAGACCGAATCCTAGCCATCAATAGCAGCAGCTTGAAAGGGAAGCCTCTGAGTGAAGCCATCCATTTGTTACAGATGGCAGGAGAGACTGTCACCTTGAAAATTAAGAAACAGACAGATGGATACTTAAACTCCTTTCCTGTCTATAAAGCCCAGTCAGCATCGAGCCCCAAGAAGTTCCCTATTTCTAGCCATTTGAGTGACCTGGGGGATGTGGAGGAGGACTCCTCACCAGCACAGAAGCCAGGCAAGCTCTCCGACATGTACCCCTCCACGGTGCCCAGTGTGGACAGTGCTGTGGATTCATGGGATGGGTCTGCAATAGACACCAGCTATGGAACTCAA

CircID	chr12:66392308\|66432628
ORF Type	ORF2
Protein Length	59
Nucleotide Length	177
Protein Sequence	MASLRGFPFKLLLLMARIRSPMWIAPVLSANPPLVRLEMIIGSNGSSVPEIVMPRGPP*
Nucleotide Sequence	ATGGCTTCACTCAGAGGCTTCCCTTTCAAGCTGCTGCTATTGATGGCTAGGATTCGGTCTCCTATGTGGATTGCGCCAGTTCTTTCAGCTAATCCCCCTTTAGTGAGGCTTGAAATGATTATAGGATCAAACGGCTCTTCAGTTCCTGAAATTGTGATGCCAAGGGGCCCCCCGTAG

CircID	chr12:66392308\|66432628
ORF Type	ORF3
Protein Length	41
Nucleotide Length	123
Protein Sequence	MKIIQMSKKVPEQLFTPWSLNATGGPLASQFQELKSRLIL*
Nucleotide Sequence	ATGAAGATAATTCAGATGAGCAAGAAAGTTCCGGAGCAATTATTTACACCGTGGAGCTTAAACGCTACGGGGGGCCCCTTGGCATCACAATTTCAGGAACTGAAGAGCCGTTTGATCCTATAA

CircID	chr12:66392308\|66432628
ORF Type	ORF4
Protein Length	40
Nucleotide Length	120
Protein Sequence	MSESLPGFCAGEESSSTSPRSLKWLEIGNFLGLDADWAL*
Nucleotide Sequence	ATGTCGGAGAGCTTGCCTGGCTTCTGTGCTGGTGAGGAGTCCTCCTCCACATCCCCCAGGTCACTCAAATGGCTAGAAATAGGGAACTTCTTGGGGCTCGATGCTGACTGGGCTTTATAG

CircID	chr12:66392308\|66432628
ORF Type	ORF5
Protein Length	40
Nucleotide Length	120
Protein Sequence	MNPQHCPHWAPWRGTCRRACLASVLVRSPPPHPPGHSNG*
Nucleotide Sequence	ATGAATCCACAGCACTGTCCACACTGGGCACCGTGGAGGGGTACATGTCGGAGAGCTTGCCTGGCTTCTGTGCTGGTGAGGAGTCCTCCTCCACATCCCCCAGGTCACTCAAATGGCTAG

CircID	chr12:66392308\|66432628
ORF Type	ORF6
Protein Length	38
Nucleotide Length	114
Protein Sequence	MWRRTPHQHRSQASSPTCTPPRCPVWTVLWIHGMGLQ*
Nucleotide Sequence	ATGTGGAGGAGGACTCCTCACCAGCACAGAAGCCAGGCAAGCTCTCCGACATGTACCCCTCCACGGTGCCCAGTGTGGACAGTGCTGTGGATTCATGGGATGGGTCTGCAATAG

CircID	chr12:66392308\|66432628
ORF Type	ORF7
Protein Length	83
Nucleotide Length	249
Protein Sequence	LLEDLNCIFHGTVVQPDIIYCEQFIPKFQGPSSGFNFISLKELCATLPFLISEMTRGSPGFLLDGELMVIPSSTLCFLGSFT*
Nucleotide Sequence	TTGCTGGAGGATCTGAACTGCATCTTCCATGGAACAGTTGTCCAGCCGGATATTATCTATTGCGAGCAATTTATCCCCAAGTTCCAGGGTCCCAGTTCTGGTTTTAACTTCATATCATTGAAAGAGCTGTGTGCCACACTCCCTTTCTTGATATCTGAAATGACGAGGGGGTCTCCTGGTTTTCTACTGGATGGTGAACTTATGGTTATTCCAAGTTCCACATTGTGCTTCTTAGGCAGCTTTACATGA

CircID	chr12:66392308\|66432628
ORF Type	ORF8
Protein Length	31
Nucleotide Length	93
Protein Sequence	MEQLSSRILSIASNLSPSSRVPVLVLTSYH*
Nucleotide Sequence	ATGGAACAGTTGTCCAGCCGGATATTATCTATTGCGAGCAATTTATCCCCAAGTTCCAGGGTCCCAGTTCTGGTTTTAACTTCATATCATTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr12:66392308\|66432628	TAF15	0	1	0
chr12:66392308\|66432628	U2AF2	9	4	0
chr12:66392308\|66432628	ELAVL1	10	5	1
chr12:66392308\|66432628	HNRNPA1	5	2	0
chr12:66392308\|66432628	CSTF2T	0	2	1
chr12:66392308\|66432628	FUS	1	0	0
chr12:66392308\|66432628	TARDBP	0	3	0
chr12:66392308\|66432628	WDR33	1	0	0
chr12:66392308\|66432628	FIP1L1	1	0	0
chr12:66392308\|66432628	CPSF7	0	1	0
chr12:66392308\|66432628	NOP58	1	1	1
chr12:66392308\|66432628	PTBP1	6	3	0
chr12:66392308\|66432628	HNRNPC	11	3	1
chr12:66392308\|66432628	CPSF3	0	1	0
chr12:66392308\|66432628	FBL	0	0	1

CircRNA Information