CircRNA Information

General Information
circRNA Basic Information
CircID chr12:6936691|6936868
Strand -
CircType exon
Host Gene ENSG00000111676.13;
Algorism CIRI2;
Sequence CAGTCTCAACACATCACCATCACCACCAGCAACAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCATCACGGAAACTCTGGGCCCCCTCCTCCTGGAGCATTTCCCCACCCACTGGAGGGCGGTAGCTCCCACCACGCACACCCTTACGCCATGTCTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:6936691|6936868 hsa-miR-210-5p 0 0 1
chr12:6936691|6936868 hsa-miR-210-3p 0 0 1
chr12:6936691|6936868 hsa-miR-765 0 0 1
chr12:6936691|6936868 hsa-miR-541-5p 0 0 1
chr12:6936691|6936868 hsa-miR-541-3p 0 0 1
chr12:6936691|6936868 hsa-miR-665 1 1 1
chr12:6936691|6936868 hsa-miR-920 0 0 1
chr12:6936691|6936868 hsa-miR-1293 0 0 1
chr12:6936691|6936868 hsa-miR-1825 0 0 1
chr12:6936691|6936868 hsa-miR-491-5p 1 1 1
chr12:6936691|6936868 hsa-miR-199a-5p 0 0 1
chr12:6936691|6936868 hsa-miR-654-5p 0 0 1
chr12:6936691|6936868 hsa-miR-876-3p 0 0 1
chr12:6936691|6936868 hsa-miR-199b-5p 0 0 1
chr12:6936691|6936868 hsa-miR-323-5p 0 0 1
chr12:6936691|6936868 hsa-miR-138 0 0 1
chr12:6936691|6936868 hsa-miR-608 1 0 0
chr12:6936691|6936868 hsa-miR-940 1 0 0
chr12:6936691|6936868 hsa-miR-1268a 1 0 0
chr12:6936691|6936868 hsa-miR-1322 1 1 0
chr12:6936691|6936868 hsa-miR-1538 1 0 0
chr12:6936691|6936868 hsa-miR-2110 0 1 0
chr12:6936691|6936868 hsa-miR-4321 1 0 0
chr12:6936691|6936868 hsa-miR-1268b 1 0 0
chr12:6936691|6936868 hsa-miR-4455 1 1 0
chr12:6936691|6936868 hsa-miR-4651 1 0 0
chr12:6936691|6936868 hsa-miR-4739 1 0 0
chr12:6936691|6936868 hsa-miR-5093 0 1 0
chr12:6936691|6936868 hsa-miR-5787 1 0 0
chr12:6936691|6936868 hsa-miR-6127 1 0 0
chr12:6936691|6936868 hsa-miR-6131 1 0 0
chr12:6936691|6936868 hsa-miR-6863 1 1 0
chr12:6936691|6936868 hsa-miR-8075 1 0 0
chr12:6936691|6936868 hsa-miR-92a-2-5p 0 1 0
chr12:6936691|6936868 hsa-miR-3150a-3p 1 1 0
chr12:6936691|6936868 hsa-miR-7106-5p 1 1 0
chr12:6936691|6936868 hsa-miR-6894-5p 1 0 0
chr12:6936691|6936868 hsa-miR-4687-3p 1 0 0
chr12:6936691|6936868 hsa-miR-6804-5p 1 0 0
chr12:6936691|6936868 hsa-miR-7847-3p 1 0 0
chr12:6936691|6936868 hsa-miR-4474-3p 1 0 0
chr12:6936691|6936868 hsa-miR-6759-5p 1 0 0
chr12:6936691|6936868 hsa-miR-6748-5p 1 1 0
chr12:6936691|6936868 hsa-miR-6772-5p 1 0 0
chr12:6936691|6936868 hsa-miR-6793-5p 1 0 0
chr12:6936691|6936868 hsa-miR-6782-5p 1 0 0
chr12:6936691|6936868 hsa-miR-6821-5p 1 1 0
chr12:6936691|6936868 hsa-miR-6786-5p 1 0 0
chr12:6936691|6936868 hsa-miR-1229-5p 1 0 0
chr12:6936691|6936868 hsa-miR-149-3p 1 0 0
chr12:6936691|6936868 hsa-miR-574-5p 1 0 0
chr12:6936691|6936868 hsa-miR-4632-3p 1 0 0
chr12:6936691|6936868 hsa-miR-652-3p 1 0 0
chr12:6936691|6936868 hsa-miR-1233-5p 1 0 0
chr12:6936691|6936868 hsa-miR-6769b-5p 1 1 0
chr12:6936691|6936868 hsa-miR-6778-5p 1 0 0
chr12:6936691|6936868 hsa-miR-6787-5p 1 0 0
chr12:6936691|6936868 hsa-miR-6812-5p 1 0 0
chr12:6936691|6936868 hsa-miR-1343-5p 1 0 0
chr12:6936691|6936868 hsa-miR-6726-5p 0 1 0
chr12:6936691|6936868 hsa-miR-6756-5p 1 1 0
chr12:6936691|6936868 hsa-miR-6769a-5p 1 0 0
chr12:6936691|6936868 hsa-miR-6803-5p 1 0 0
chr12:6936691|6936868 hsa-miR-6851-5p 1 0 0
chr12:6936691|6936868 hsa-miR-11181-3p 1 1 0
chr12:6936691|6936868 hsa-miR-6722-3p 1 0 0
chr12:6936691|6936868 hsa-miR-6751-5p 1 0 0
chr12:6936691|6936868 hsa-miR-10396b-5p 1 0 0
chr12:6936691|6936868 hsa-miR-1237-5p 1 0 0
chr12:6936691|6936868 hsa-miR-4649-5p 1 0 0
chr12:6936691|6936868 hsa-miR-4745-5p 1 0 0
chr12:6936691|6936868 hsa-miR-6729-5p 1 0 0
chr12:6936691|6936868 hsa-miR-675-5p 1 0 0
chr12:6936691|6936868 hsa-miR-6848-5p 1 0 0
chr12:6936691|6936868 hsa-miR-6858-5p 1 0 0
chr12:6936691|6936868 hsa-miR-6883-5p 1 0 0
chr12:6936691|6936868 hsa-miR-4697-5p 1 0 0
chr12:6936691|6936868 hsa-miR-939-5p 1 0 0
chr12:6936691|6936868 hsa-miR-3940-5p 1 0 0
chr12:6936691|6936868 hsa-miR-6891-5p 1 0 0
chr12:6936691|6936868 hsa-miR-3184-5p 1 0 0
chr12:6936691|6936868 hsa-miR-6762-5p 1 0 0
chr12:6936691|6936868 hsa-miR-6500-5p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr12:6936691|6936868
ORF Type ORF1
Protein Length 27
Nucleotide Length 81
Protein Sequence MGPLLLEHFPTHWRAVAPTTHTLTPCL
Nucleotide Sequence CTGGGCCCCCTCCTCCTGGAGCATTTCCCCACCCACTGGAGGGCGGTAGCTCCCACCACGCACACCCTTACGCCATGTCTC
CircID chr12:6936691|6936868
ORF Type ORF2
Protein Length 40
Nucleotide Length 120
Protein Sequence MLQEEGAQSFRDAAAAAAAAAAAAAAAVAVAGGDGDVLRL
Nucleotide Sequence ATGCTCCAGGAGGAGGGGGCCCAGAGTTTCCGTGATGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGTTGCTGGTGGTGATGGTGATGTGTTGAGACTG
CircID chr12:6936691|6936868
ORF Type ORF3
Protein Length 26
Nucleotide Length 81
Protein Sequence MLLLLLLLLLLLLLLLLLLLVVMVMC
Nucleotide Sequence ATGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGTTGCTGGTGGTGATGGTGATGTGTTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab