CircRNA Information

General Information
circRNA Basic Information
CircID chr12:6941878|6941979
Strand +
CircType exon
Host Gene ENSG00000111676.13;
Algorism CIRI2;
Sequence CTCCCCACCTCTGCACACCACATCGGGCCTTGGCCTTCTGTCTGTCCCTCCCTCCCCCACTCTCTGTCCAGCTGCGGAGGCCCTGCAACTGAGCAGCACCCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:6941878|6941979 hsa-miR-625-5p 0 0 1
chr12:6941878|6941979 hsa-miR-625-3p 0 0 1
chr12:6941878|6941979 hsa-miR-939-5p 0 0 1
chr12:6941878|6941979 hsa-miR-939-3p 0 0 1
chr12:6941878|6941979 hsa-miR-1275 1 0 1
chr12:6941878|6941979 hsa-miR-1321 0 0 1
chr12:6941878|6941979 hsa-miR-1324 0 0 1
chr12:6941878|6941979 hsa-miR-491-5p 0 0 1
chr12:6941878|6941979 hsa-miR-1207-3p 0 0 1
chr12:6941878|6941979 hsa-miR-767-3p 0 0 1
chr12:6941878|6941979 hsa-miR-184 1 0 0
chr12:6941878|6941979 hsa-miR-422a 1 0 0
chr12:6941878|6941979 hsa-miR-612 1 0 0
chr12:6941878|6941979 hsa-miR-663a 1 0 0
chr12:6941878|6941979 hsa-miR-658 1 0 0
chr12:6941878|6941979 hsa-miR-665 1 0 0
chr12:6941878|6941979 hsa-miR-1182 1 0 0
chr12:6941878|6941979 hsa-miR-1268a 1 0 0
chr12:6941878|6941979 hsa-miR-378b 1 0 0
chr12:6941878|6941979 hsa-miR-3138 1 0 0
chr12:6941878|6941979 hsa-miR-3141 1 0 0
chr12:6941878|6941979 hsa-miR-3197 1 0 0
chr12:6941878|6941979 hsa-miR-378c 1 0 0
chr12:6941878|6941979 hsa-miR-4298 1 0 0
chr12:6941878|6941979 hsa-miR-4270 1 0 0
chr12:6941878|6941979 hsa-miR-3945 1 0 0
chr12:6941878|6941979 hsa-miR-1268b 1 0 0
chr12:6941878|6941979 hsa-miR-378e 1 0 0
chr12:6941878|6941979 hsa-miR-3135b 1 0 0
chr12:6941878|6941979 hsa-miR-4462 1 0 0
chr12:6941878|6941979 hsa-miR-4463 1 0 0
chr12:6941878|6941979 hsa-miR-4466 1 0 0
chr12:6941878|6941979 hsa-miR-4488 1 0 0
chr12:6941878|6941979 hsa-miR-2392 1 0 0
chr12:6941878|6941979 hsa-miR-4523 1 0 0
chr12:6941878|6941979 hsa-miR-378i 1 0 0
chr12:6941878|6941979 hsa-miR-4644 1 0 0
chr12:6941878|6941979 hsa-miR-4651 1 0 0
chr12:6941878|6941979 hsa-miR-4656 1 0 0
chr12:6941878|6941979 hsa-miR-4688 1 0 0
chr12:6941878|6941979 hsa-miR-4739 1 0 0
chr12:6941878|6941979 hsa-miR-5090 1 0 0
chr12:6941878|6941979 hsa-miR-5192 1 0 0
chr12:6941878|6941979 hsa-miR-5698 1 0 0
chr12:6941878|6941979 hsa-miR-5739 1 0 0
chr12:6941878|6941979 hsa-miR-5787 1 0 0
chr12:6941878|6941979 hsa-miR-6086 1 0 0
chr12:6941878|6941979 hsa-miR-6090 1 0 0
chr12:6941878|6941979 hsa-miR-6127 1 0 0
chr12:6941878|6941979 hsa-miR-6131 1 0 0
chr12:6941878|6941979 hsa-miR-6133 1 0 0
chr12:6941878|6941979 hsa-miR-6860 1 0 0
chr12:6941878|6941979 hsa-miR-8085 1 0 0
chr12:6941878|6941979 hsa-miR-4433b-3p 1 0 0
chr12:6941878|6941979 hsa-miR-1287-5p 1 0 0
chr12:6941878|6941979 hsa-miR-7106-5p 1 0 0
chr12:6941878|6941979 hsa-miR-6825-5p 1 0 0
chr12:6941878|6941979 hsa-miR-6799-5p 1 0 0
chr12:6941878|6941979 hsa-miR-6089 1 0 0
chr12:6941878|6941979 hsa-miR-6757-5p 1 0 0
chr12:6941878|6941979 hsa-miR-6880-5p 1 0 0
chr12:6941878|6941979 hsa-miR-7847-3p 1 0 0
chr12:6941878|6941979 hsa-miR-1301-3p 1 0 0
chr12:6941878|6941979 hsa-miR-7845-5p 1 0 0
chr12:6941878|6941979 hsa-miR-6742-5p 1 0 0
chr12:6941878|6941979 hsa-miR-6716-5p 1 0 0
chr12:6941878|6941979 hsa-miR-3151-5p 1 0 0
chr12:6941878|6941979 hsa-miR-3180-3p 1 0 0
chr12:6941878|6941979 hsa-miR-6748-5p 1 0 0
chr12:6941878|6941979 hsa-miR-6796-5p 1 0 0
chr12:6941878|6941979 hsa-miR-6732-5p 1 0 0
chr12:6941878|6941979 hsa-miR-6805-5p 1 0 0
chr12:6941878|6941979 hsa-miR-3126-5p 1 0 0
chr12:6941878|6941979 hsa-miR-6760-5p 1 0 0
chr12:6941878|6941979 hsa-miR-5006-5p 1 0 0
chr12:6941878|6941979 hsa-miR-6786-5p 1 0 0
chr12:6941878|6941979 hsa-miR-7109-5p 1 0 0
chr12:6941878|6941979 hsa-miR-1908-5p 1 0 0
chr12:6941878|6941979 hsa-miR-1228-5p 1 0 0
chr12:6941878|6941979 hsa-miR-296-3p 1 0 0
chr12:6941878|6941979 hsa-miR-4743-5p 1 0 0
chr12:6941878|6941979 hsa-miR-4638-3p 1 0 0
chr12:6941878|6941979 hsa-miR-149-3p 1 0 0
chr12:6941878|6941979 hsa-miR-6824-5p 1 0 0
chr12:6941878|6941979 hsa-miR-423-5p 1 0 0
chr12:6941878|6941979 hsa-miR-6801-5p 1 0 0
chr12:6941878|6941979 hsa-miR-1207-5p 1 0 0
chr12:6941878|6941979 hsa-miR-1233-5p 1 0 0
chr12:6941878|6941979 hsa-miR-6769b-5p 1 0 0
chr12:6941878|6941979 hsa-miR-6778-5p 1 0 0
chr12:6941878|6941979 hsa-miR-6787-5p 1 0 0
chr12:6941878|6941979 hsa-miR-6816-5p 1 0 0
chr12:6941878|6941979 hsa-miR-6870-5p 1 0 0
chr12:6941878|6941979 hsa-miR-6775-5p 1 0 0
chr12:6941878|6941979 hsa-miR-1343-5p 1 0 0
chr12:6941878|6941979 hsa-miR-5001-5p 1 0 0
chr12:6941878|6941979 hsa-miR-6737-5p 1 0 0
chr12:6941878|6941979 hsa-miR-6743-5p 1 0 0
chr12:6941878|6941979 hsa-miR-6754-5p 1 0 0
chr12:6941878|6941979 hsa-miR-6756-5p 1 0 0
chr12:6941878|6941979 hsa-miR-6803-5p 1 0 0
chr12:6941878|6941979 hsa-miR-6819-5p 1 0 0
chr12:6941878|6941979 hsa-miR-6842-5p 1 0 0
chr12:6941878|6941979 hsa-miR-10401-5p 1 0 0
chr12:6941878|6941979 hsa-miR-11181-3p 1 0 0
chr12:6941878|6941979 hsa-miR-1249-5p 1 0 0
chr12:6941878|6941979 hsa-miR-6751-5p 1 0 0
chr12:6941878|6941979 hsa-miR-6779-5p 1 0 0
chr12:6941878|6941979 hsa-miR-6780a-5p 1 0 0
chr12:6941878|6941979 hsa-miR-6797-5p 1 0 0
chr12:6941878|6941979 hsa-miR-6875-5p 1 0 0
chr12:6941878|6941979 hsa-miR-6879-5p 1 0 0
chr12:6941878|6941979 hsa-miR-7111-5p 1 0 0
chr12:6941878|6941979 hsa-miR-4728-5p 1 0 0
chr12:6941878|6941979 hsa-miR-5189-5p 1 0 0
chr12:6941878|6941979 hsa-miR-5196-5p 1 0 0
chr12:6941878|6941979 hsa-miR-6780b-5p 1 0 0
chr12:6941878|6941979 hsa-miR-6836-5p 1 0 0
chr12:6941878|6941979 hsa-miR-10396b-5p 1 0 0
chr12:6941878|6941979 hsa-miR-1237-5p 1 0 0
chr12:6941878|6941979 hsa-miR-328-5p 1 0 0
chr12:6941878|6941979 hsa-miR-4649-5p 1 0 0
chr12:6941878|6941979 hsa-miR-4685-5p 1 0 0
chr12:6941878|6941979 hsa-miR-4745-5p 1 0 0
chr12:6941878|6941979 hsa-miR-4749-5p 1 0 0
chr12:6941878|6941979 hsa-miR-6729-5p 1 0 0
chr12:6941878|6941979 hsa-miR-6735-5p 1 0 0
chr12:6941878|6941979 hsa-miR-6795-5p 1 0 0
chr12:6941878|6941979 hsa-miR-6883-5p 1 0 0
chr12:6941878|6941979 hsa-miR-6887-5p 1 0 0
chr12:6941878|6941979 hsa-miR-3187-5p 1 0 0
chr12:6941878|6941979 hsa-miR-4723-5p 1 0 0
chr12:6941878|6941979 hsa-miR-1238-5p 1 0 0
chr12:6941878|6941979 hsa-miR-4758-5p 1 0 0
chr12:6941878|6941979 hsa-miR-6758-5p 1 0 0
chr12:6941878|6941979 hsa-miR-6856-5p 1 0 0
chr12:6941878|6941979 hsa-miR-7843-5p 1 0 0
chr12:6941878|6941979 hsa-miR-6736-5p 1 0 0
chr12:6941878|6941979 hsa-miR-4646-5p 1 0 0
chr12:6941878|6941979 hsa-miR-4747-5p 1 0 0
chr12:6941878|6941979 hsa-miR-378a-3p 1 0 0
chr12:6941878|6941979 hsa-miR-6785-5p 1 0 0
chr12:6941878|6941979 hsa-miR-3184-5p 1 0 0
chr12:6941878|6941979 hsa-miR-6724-5p 1 0 0
chr12:6941878|6941979 hsa-miR-378d 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr12:6941878|6941979
ORF Type ORF1
Protein Length 30
Nucleotide Length 90
Protein Sequence MHTTSGLGLLSVPPSPTLCPAAEALQLSST
Nucleotide Sequence CTGCACACCACATCGGGCCTTGGCCTTCTGTCTGTCCCTCCCTCCCCCACTCTCTGTCCAGCTGCGGAGGCCCTGCAACTGAGCAGCACC
CircID chr12:6941878|6941979
ORF Type ORF2
Protein Length 32
Nucleotide Length 96
Protein Sequence MLSCRASAAGQRVGEGGTDRRPRPDVVCRGGE
Nucleotide Sequence CTGCTCAGTTGCAGGGCCTCCGCAGCTGGACAGAGAGTGGGGGAGGGAGGGACAGACAGAAGGCCAAGGCCCGATGTGGTGTGCAGAGGTGGGGAG
CircID chr12:6941878|6941979
ORF Type ORF3
Protein Length 29
Nucleotide Length 87
Protein Sequence MQGLRSWTESGGGRDRQKAKARCGVQRWG
Nucleotide Sequence TTGCAGGGCCTCCGCAGCTGGACAGAGAGTGGGGGAGGGAGGGACAGACAGAAGGCCAAGGCCCGATGTGGTGTGCAGAGGTGGGGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab