CircNet

General Information

circRNA Basic Information

CircID	chr12:70285400\|70311017
Strand	+
CircType	exon
Host Gene	ENSG00000111596.11;
Algorism	find_circ;CIRI2;DCC;
Sequence	TAAAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACTTCATGATCCGCCTGCCTTGGCCTCCCAAAGTGCTTGGATTACAGGCGTGAGCCACCGCACCTGGCCGCAAAGTTATCTTTTAAGAGGTTATCTTAGGTCTTGCGTGGAGTCTAGGATGATAGCACTGATGGTGGCAGAGACAGGGTCTCACTATGTTGCCCAGGCTTGTCAAGTGATCCTCCCACCTCAGCCTCTCAAGATGCTGGGATTACAGAGCGGAAGAATCCCATCGTTTATCATGTTCTGGTTGGACTTTCTTACTGTTTGCTGGAGTTGAACTTCAGAGCTATGGCGTCAACCCTGCTGTAATATCTCAGGGGAGCTCCTAGGGTGGGGCTGGTGCCATGGCTCACCCTCCAACCTTTCCTTCTTCACTTCAGCCTCCAGCTCTGAGCTTTCCAATCCCCAGAGTAGCAAATGTTGAAAGAAGTTGCACAGACGTGGTCTCACTCTGTCACCCAGGCTGGACTGCAGTGGCGTCATCTTGGCTCACTGCAACCTCCGCCTCCCAAGTTCAAGTGATTCTCCTGCCTCGGCCTCCAAGTAGCTGGGACTACAGGCTTTGGTATCAGGATGATGCTGGCCTCATAAAATGAATTAGGGAGGATTCCCTCTTTTTCTATTTATTGGAATAGTTTCAGAAGGAATGGTACCAGCTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGATTTTTTTGGTTGGGAGAAGATGGGTATAGTTTAACCCTTTCATATCATCCATCCATCCATTCCTACTAGTTCTGCCTCAGAGTATATCCTTTATTCAACTACTACTCACCACCCTATTAGGCCATCATTATCTATCACTGGCCTCCTAATGCATTTTCCTGCTTTCGTTTTATACCCTCTTTAGCCCATTCCTCATGGAGTAGCTAGGACCTTTAAGTGACAAACAGCATGTTTGGTGCTTCAAGAAAGAAGTTTGTAGAGGGGGTCGACAGTGACTACCATGACGAAAACATGTACTACAGCCAGTCTTCTATGTTTCCACATCGGTCAGAAAAAGAT

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	miRanda	targetScan
chr12:70285400\|70311017	hsa-miR-146a-3p	1	1
chr12:70285400\|70311017	hsa-miR-196a-3p	1	1
chr12:70285400\|70311017	hsa-miR-150-5p	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr12:70285400\|70311017
ORF Type	ORF1
Protein Length	84
Nucleotide Length	252
Protein Sequence	MAHPPTFPSSLQPPALSFPIPRVANVERSCTDVVSLCHPGWTAVASSWLTATSASQVQVILLPRPPSSWDYRLWYQDDAGLIK*
Nucleotide Sequence	ATGGCTCACCCTCCAACCTTTCCTTCTTCACTTCAGCCTCCAGCTCTGAGCTTTCCAATCCCCAGAGTAGCAAATGTTGAAAGAAGTTGCACAGACGTGGTCTCACTCTGTCACCCAGGCTGGACTGCAGTGGCGTCATCTTGGCTCACTGCAACCTCCGCCTCCCAAGTTCAAGTGATTCTCCTGCCTCGGCCTCCAAGTAGCTGGGACTACAGGCTTTGGTATCAGGATGATGCTGGCCTCATAAAATGA

CircID	chr12:70285400\|70311017
ORF Type	ORF2
Protein Length	63
Nucleotide Length	189
Protein Sequence	MTPLQSSLGDRVRPRLCNFFQHLLLWGLESSELEAEVKKERLEGEPWHQPHPRSSPEILQQG*
Nucleotide Sequence	ATGACGCCACTGCAGTCCAGCCTGGGTGACAGAGTGAGACCACGTCTGTGCAACTTCTTTCAACATTTGCTACTCTGGGGATTGGAAAGCTCAGAGCTGGAGGCTGAAGTGAAGAAGGAAAGGTTGGAGGGTGAGCCATGGCACCAGCCCCACCCTAGGAGCTCCCCTGAGATATTACAGCAGGGTTGA

CircID	chr12:70285400\|70311017
ORF Type	ORF3
Protein Length	54
Nucleotide Length	162
Protein Sequence	MIALMVAETGSHYVAQACQVILPPQPLKMLGLQSGRIPSFIMFWLDFLTVCWS*
Nucleotide Sequence	ATGATAGCACTGATGGTGGCAGAGACAGGGTCTCACTATGTTGCCCAGGCTTGTCAAGTGATCCTCCCACCTCAGCCTCTCAAGATGCTGGGATTACAGAGCGGAAGAATCCCATCGTTTATCATGTTCTGGTTGGACTTTCTTACTGTTTGCTGGAGTTGA

CircID	chr12:70285400\|70311017
ORF Type	ORF4
Protein Length	41
Nucleotide Length	123
Protein Sequence	MDDMKGLNYTHLLPTKKIQDQMDSQPNSTRGTRRSWYHSF*
Nucleotide Sequence	ATGGATGATATGAAAGGGTTAAACTATACCCATCTTCTCCCAACCAAAAAAATCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAGCTGGTACCATTCCTTCTGA

CircID	chr12:70285400\|70311017
ORF Type	ORF5
Protein Length	37
Nucleotide Length	111
Protein Sequence	MFGASRKKFVEGVDSDYHDENMYYSQSSMFPHRSEKD
Nucleotide Sequence	ATGTTTGGTGCTTCAAGAAAGAAGTTTGTAGAGGGGGTCGACAGTGACTACCATGACGAAAACATGTACTACAGCCAGTCTTCTATGTTTCCACATCGGTCAGAAAAAGAT

CircID	chr12:70285400\|70311017
ORF Type	ORF6
Protein Length	35
Nucleotide Length	105
Protein Sequence	MLKEVAQTWSHSVTQAGLQWRHLGSLQPPPPKFK*
Nucleotide Sequence	ATGTTGAAAGAAGTTGCACAGACGTGGTCTCACTCTGTCACCCAGGCTGGACTGCAGTGGCGTCATCTTGGCTCACTGCAACCTCCGCCTCCCAAGTTCAAGTGA

CircID	chr12:70285400\|70311017
ORF Type	ORF7
Protein Length	51
Nucleotide Length	153
Protein Sequence	SSHLSLSRCWDYRAEESHRLSCSGWTFLLFAGVELQSYGVNPAVISQGSS*
Nucleotide Sequence	TCCTCCCACCTCAGCCTCTCAAGATGCTGGGATTACAGAGCGGAAGAATCCCATCGTTTATCATGTTCTGGTTGGACTTTCTTACTGTTTGCTGGAGTTGAACTTCAGAGCTATGGCGTCAACCCTGCTGTAATATCTCAGGGGAGCTCCTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr12:70285400\|70311017	KHSRP	0	0	7
chr12:70285400\|70311017	MOV10	0	0	5
chr12:70285400\|70311017	NCBP2	0	0	1
chr12:70285400\|70311017	PRPF8	0	4	10
chr12:70285400\|70311017	TNRC6A	1	0	0
chr12:70285400\|70311017	NUDT21	0	0	8
chr12:70285400\|70311017	EIF3H	0	0	2
chr12:70285400\|70311017	DGCR8	0	0	1
chr12:70285400\|70311017	EIF3A	0	0	1
chr12:70285400\|70311017	EIF3G	0	0	1
chr12:70285400\|70311017	PTBP1	0	0	7
chr12:70285400\|70311017	DHX9	0	0	2
chr12:70285400\|70311017	DDX3X	1	0	4
chr12:70285400\|70311017	ACIN1	0	0	4
chr12:70285400\|70311017	NKRF	0	0	1
chr12:70285400\|70311017	FXR2	0	0	2
chr12:70285400\|70311017	GTF2F1	0	0	4
chr12:70285400\|70311017	RBM47	0	0	1
chr12:70285400\|70311017	EIF4G2	0	0	2
chr12:70285400\|70311017	DDX42	0	0	1
chr12:70285400\|70311017	CSTF2T	0	0	42
chr12:70285400\|70311017	VIM	0	0	1
chr12:70285400\|70311017	DDX6	0	0	1
chr12:70285400\|70311017	XRN2	0	0	1
chr12:70285400\|70311017	RTCB	0	0	1
chr12:70285400\|70311017	YWHAG	0	1	0
chr12:70285400\|70311017	ELAVL1	3	8	63
chr12:70285400\|70311017	ELAVL3	1	1	0
chr12:70285400\|70311017	TBRG4	0	0	2
chr12:70285400\|70311017	CELF2	0	2	0
chr12:70285400\|70311017	PUM2	0	0	3
chr12:70285400\|70311017	YTHDF2	0	0	6
chr12:70285400\|70311017	YTHDF1	0	0	2
chr12:70285400\|70311017	SRSF7	1	1	2
chr12:70285400\|70311017	DDX59	0	0	1
chr12:70285400\|70311017	XPO5	0	0	1
chr12:70285400\|70311017	SRSF3	0	0	1
chr12:70285400\|70311017	SUB1	0	0	3
chr12:70285400\|70311017	U2AF1	0	0	3
chr12:70285400\|70311017	ADAR	0	0	5
chr12:70285400\|70311017	U2AF2	6	8	48
chr12:70285400\|70311017	DDX54	0	1	50
chr12:70285400\|70311017	EFTUD2	0	0	7
chr12:70285400\|70311017	PCBP2	0	0	5
chr12:70285400\|70311017	SF3A3	0	0	1
chr12:70285400\|70311017	ZNF184	0	0	1
chr12:70285400\|70311017	TIAL1	0	1	0
chr12:70285400\|70311017	LIN28B	0	0	17
chr12:70285400\|70311017	LIN28A	0	0	2
chr12:70285400\|70311017	BCCIP	0	0	2
chr12:70285400\|70311017	RBFOX2	0	0	1
chr12:70285400\|70311017	SAFB2	0	0	1
chr12:70285400\|70311017	RBM22	0	2	3
chr12:70285400\|70311017	WDR33	0	0	4
chr12:70285400\|70311017	YTHDF3	0	0	2
chr12:70285400\|70311017	ATXN2	0	0	16
chr12:70285400\|70311017	EIF4A3	2	1	4
chr12:70285400\|70311017	AGO2	0	1	2
chr12:70285400\|70311017	CNBP	0	0	1
chr12:70285400\|70311017	RPS5	0	0	3
chr12:70285400\|70311017	TAF15	0	0	1
chr12:70285400\|70311017	FUS	0	1	5
chr12:70285400\|70311017	FASTKD2	0	0	1
chr12:70285400\|70311017	ZNF622	0	0	1
chr12:70285400\|70311017	IGF2BP1	0	0	7
chr12:70285400\|70311017	AKAP8L	0	0	1
chr12:70285400\|70311017	HNRNPK	1	0	0
chr12:70285400\|70311017	HNRNPL	0	1	0
chr12:70285400\|70311017	HNRNPM	0	0	4
chr12:70285400\|70311017	RBM15	0	0	1
chr12:70285400\|70311017	HNRNPC	12	3	178
chr12:70285400\|70311017	HNRNPD	0	0	1
chr12:70285400\|70311017	SMNDC1	1	0	0
chr12:70285400\|70311017	HNRNPA1	0	1	15
chr12:70285400\|70311017	UCHL5	0	0	4
chr12:70285400\|70311017	IGF2BP3	0	0	12
chr12:70285400\|70311017	IGF2BP2	1	0	223
chr12:70285400\|70311017	HNRNPUL1	0	0	1
chr12:70285400\|70311017	TARDBP	1	1	27
chr12:70285400\|70311017	YTHDC1	0	0	1
chr12:70285400\|70311017	BUD13	0	1	5
chr12:70285400\|70311017	SUGP2	0	0	1
chr12:70285400\|70311017	GEMIN5	0	0	1
chr12:70285400\|70311017	PPIG	0	0	3
chr12:70285400\|70311017	CDC40	0	0	2
chr12:70285400\|70311017	FBL	0	0	4
chr12:70285400\|70311017	AGGF1	0	0	4
chr12:70285400\|70311017	SF3B4	0	0	3
chr12:70285400\|70311017	SF3B1	0	0	2
chr12:70285400\|70311017	CPSF7	0	0	15
chr12:70285400\|70311017	FMR1	0	0	6
chr12:70285400\|70311017	CPSF6	0	0	4
chr12:70285400\|70311017	CPSF3	0	0	1
chr12:70285400\|70311017	CPSF1	0	0	1
chr12:70285400\|70311017	QKI	0	0	6
chr12:70285400\|70311017	NOP58	2	3	5
chr12:70285400\|70311017	NOP56	1	2	1
chr12:70285400\|70311017	FIP1L1	0	0	19
chr12:70285400\|70311017	TRA2A	0	0	3
chr12:70285400\|70311017	ZC3H7B	0	0	6
chr12:70285400\|70311017	RBM10	0	4	0
chr12:70285400\|70311017	SRSF1	0	0	23
chr12:70285400\|70311017	DDX24	0	0	2
chr12:70285400\|70311017	CSTF2	5	0	16
chr12:70285400\|70311017	TARBP2	0	0	6
chr12:70285400\|70311017	DKC1	0	0	1
chr12:70285400\|70311017	EWSR1	0	1	5
chr12:70285400\|70311017	ILF3	0	0	1

CircRNA Information