CircRNA Information

General Information
circRNA Basic Information
CircID chr12:7116873|7117014
Strand +
CircType exon
Host Gene ENSG00000205885.6;
Algorism CIRI2;
Sequence CCTGATCCTAAACTACCCATCTCAGCCGCTTCTGGATTCCTGACCCACAGAAACTGTGTGAAATAGTACATACTTGCTGTTTTAAACAAAATGTGGGGGTGACTTTTTACAAGCAGACAGATAACTGCAACATAGTCTCAAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:7116873|7117014 hsa-miR-224-5p 0 0 1
chr12:7116873|7117014 hsa-miR-224-3p 0 0 1
chr12:7116873|7117014 hsa-miR-143-5p 0 0 1
chr12:7116873|7117014 hsa-miR-143-3p 0 0 1
chr12:7116873|7117014 hsa-miR-377-5p 0 0 1
chr12:7116873|7117014 hsa-miR-377-3p 0 0 1
chr12:7116873|7117014 hsa-miR-346 0 0 1
chr12:7116873|7117014 hsa-miR-632 0 0 1
chr12:7116873|7117014 hsa-miR-651-5p 0 0 1
chr12:7116873|7117014 hsa-miR-651-3p 0 0 1
chr12:7116873|7117014 hsa-miR-873-5p 0 0 1
chr12:7116873|7117014 hsa-miR-873-3p 0 0 1
chr12:7116873|7117014 hsa-miR-198 1 0 0
chr12:7116873|7117014 hsa-miR-762 1 0 0
chr12:7116873|7117014 hsa-miR-665 1 0 0
chr12:7116873|7117014 hsa-miR-4259 1 0 0
chr12:7116873|7117014 hsa-miR-3937 1 0 0
chr12:7116873|7117014 hsa-miR-4505 1 0 0
chr12:7116873|7117014 hsa-miR-2392 1 0 0
chr12:7116873|7117014 hsa-miR-4507 1 0 0
chr12:7116873|7117014 hsa-miR-1587 1 0 0
chr12:7116873|7117014 hsa-miR-3960 1 0 0
chr12:7116873|7117014 hsa-miR-4656 1 0 0
chr12:7116873|7117014 hsa-miR-5186 1 0 0
chr12:7116873|7117014 hsa-miR-5787 1 0 0
chr12:7116873|7117014 hsa-miR-6134 1 0 0
chr12:7116873|7117014 hsa-miR-4433a-3p 1 0 0
chr12:7116873|7117014 hsa-miR-6765-5p 1 0 0
chr12:7116873|7117014 hsa-miR-6728-5p 1 0 0
chr12:7116873|7117014 hsa-miR-6757-5p 1 0 0
chr12:7116873|7117014 hsa-miR-6820-5p 1 0 0
chr12:7116873|7117014 hsa-miR-3622b-5p 1 0 0
chr12:7116873|7117014 hsa-miR-4640-5p 1 0 0
chr12:7116873|7117014 hsa-miR-4713-3p 1 0 0
chr12:7116873|7117014 hsa-miR-1207-5p 1 0 0
chr12:7116873|7117014 hsa-miR-6756-5p 1 0 0
chr12:7116873|7117014 hsa-miR-6813-5p 1 0 0
chr12:7116873|7117014 hsa-miR-6851-5p 1 0 0
chr12:7116873|7117014 hsa-miR-6779-5p 1 0 0
chr12:7116873|7117014 hsa-miR-3620-5p 1 0 0
chr12:7116873|7117014 hsa-miR-5196-5p 1 0 0
chr12:7116873|7117014 hsa-miR-6846-5p 1 0 0
chr12:7116873|7117014 hsa-miR-6848-5p 1 0 0
chr12:7116873|7117014 hsa-miR-6858-5p 1 0 0
chr12:7116873|7117014 hsa-miR-3198 1 0 0
chr12:7116873|7117014 hsa-miR-6822-5p 1 0 0
chr12:7116873|7117014 hsa-miR-6884-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr12:7116873|7117014
ORF Type ORF1
Protein Length 29
Nucleotide Length 87
Protein Sequence MCEIVHTCCFKQNVGVTFYKQTDNCNIVS
Nucleotide Sequence CTGTGTGAAATAGTACATACTTGCTGTTTTAAACAAAATGTGGGGGTGACTTTTTACAAGCAGACAGATAACTGCAACATAGTCTCA

CircID chr12:7116873|7117014
ORF Type ORF2
Protein Length 38
Nucleotide Length 114
Protein Sequence MLVKSHPHILFKTASMYYFTQFLWVRNPEAAEMGSLGS
Nucleotide Sequence CTGCTTGTAAAAAGTCACCCCCACATTTTGTTTAAAACAGCAAGTATGTACTATTTCACACAGTTTCTGTGGGTCAGGAATCCAGAAGCGGCTGAGATGGGTAGTTTAGGATCA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites