CircRNA Information

General Information
circRNA Basic Information
CircID chr12:754120|754324
Strand +
CircType exon
Host Gene ENSG00000060237.15;
Algorism CIRI2;
Sequence CTGCAGTTCACACCAGGCGACTTCCACGGTGGTTTCAGTGTCCAGACCTTTGTAGACCGTCTTAAAGGAGCCTCTGCCGATTTCGATGTCAAACTTGAGAAAGCGGCCATCGTTAGACATTCCCACGGCCTTGGTCTCCAGCTCTTCGATATCATCCTGCTGCTGGCTCCGTTCCTCCTGTGGCTCCTTGGCGCTGCCGCCGCCG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:754120|754324 hsa-miR-15a-5p 0 0 1
chr12:754120|754324 hsa-miR-15a-3p 0 0 1
chr12:754120|754324 hsa-miR-208a-5p 0 0 1
chr12:754120|754324 hsa-miR-208a-3p 0 0 1
chr12:754120|754324 hsa-miR-214-5p 0 0 1
chr12:754120|754324 hsa-miR-214-3p 0 0 1
chr12:754120|754324 hsa-miR-15b-5p 0 0 1
chr12:754120|754324 hsa-miR-15b-3p 0 0 1
chr12:754120|754324 hsa-miR-195-5p 0 0 1
chr12:754120|754324 hsa-miR-195-3p 0 0 1
chr12:754120|754324 hsa-miR-206 0 0 1
chr12:754120|754324 hsa-miR-422a 0 0 1
chr12:754120|754324 hsa-miR-424-5p 0 0 1
chr12:754120|754324 hsa-miR-424-3p 0 0 1
chr12:754120|754324 hsa-miR-489-5p 0 0 1
chr12:754120|754324 hsa-miR-489-3p 0 0 1
chr12:754120|754324 hsa-miR-497-5p 0 0 1
chr12:754120|754324 hsa-miR-497-3p 0 0 1
chr12:754120|754324 hsa-miR-613 0 0 1
chr12:754120|754324 hsa-miR-208b-5p 0 0 1
chr12:754120|754324 hsa-miR-208b-3p 0 0 1
chr12:754120|754324 hsa-miR-513c-5p 0 0 1
chr12:754120|754324 hsa-miR-513c-3p 0 0 1
chr12:754120|754324 hsa-miR-1283 0 1 1
chr12:754120|754324 hsa-miR-885-3p 0 0 1
chr12:754120|754324 hsa-miR-524-5p 0 1 1
chr12:754120|754324 hsa-miR-509-3-5p 0 0 1
chr12:754120|754324 hsa-miR-509-5p 0 0 1
chr12:754120|754324 hsa-miR-520d-5p 0 0 1
chr12:754120|754324 hsa-miR-16 0 0 1
chr12:754120|754324 hsa-miR-378 0 0 1
chr12:754120|754324 hsa-miR-1 0 0 1
chr12:754120|754324 hsa-miR-514 0 0 1
chr12:754120|754324 hsa-miR-499-5p 0 0 1
chr12:754120|754324 hsa-miR-663a 1 0 0
chr12:754120|754324 hsa-miR-762 1 1 0
chr12:754120|754324 hsa-miR-761 0 1 0
chr12:754120|754324 hsa-miR-4270 1 1 0
chr12:754120|754324 hsa-miR-3135b 1 1 0
chr12:754120|754324 hsa-miR-4467 1 1 0
chr12:754120|754324 hsa-miR-4498 1 0 0
chr12:754120|754324 hsa-miR-3960 1 1 0
chr12:754120|754324 hsa-miR-4739 1 0 0
chr12:754120|754324 hsa-miR-6090 1 0 0
chr12:754120|754324 hsa-miR-8089 1 0 0
chr12:754120|754324 hsa-miR-12118 1 0 0
chr12:754120|754324 hsa-miR-12120 1 0 0
chr12:754120|754324 hsa-miR-6894-5p 1 0 0
chr12:754120|754324 hsa-miR-766-5p 1 1 0
chr12:754120|754324 hsa-miR-1236-5p 1 0 0
chr12:754120|754324 hsa-miR-4786-5p 0 1 0
chr12:754120|754324 hsa-miR-6089 1 0 0
chr12:754120|754324 hsa-miR-6807-5p 0 1 0
chr12:754120|754324 hsa-miR-4695-5p 1 0 0
chr12:754120|754324 hsa-miR-4722-5p 1 1 0
chr12:754120|754324 hsa-miR-7154-3p 1 0 0
chr12:754120|754324 hsa-miR-505-5p 0 1 0
chr12:754120|754324 hsa-miR-6820-5p 1 1 0
chr12:754120|754324 hsa-miR-3928-3p 1 0 0
chr12:754120|754324 hsa-miR-6721-5p 1 0 0
chr12:754120|754324 hsa-miR-6768-5p 1 1 0
chr12:754120|754324 hsa-miR-1292-5p 1 0 0
chr12:754120|754324 hsa-miR-2467-5p 0 1 0
chr12:754120|754324 hsa-miR-6798-5p 1 0 0
chr12:754120|754324 hsa-miR-3126-5p 1 1 0
chr12:754120|754324 hsa-miR-3194-5p 1 0 0
chr12:754120|754324 hsa-miR-4640-5p 1 0 0
chr12:754120|754324 hsa-miR-6771-5p 1 0 0
chr12:754120|754324 hsa-miR-4690-5p 1 0 0
chr12:754120|754324 hsa-miR-4638-3p 0 1 0
chr12:754120|754324 hsa-miR-4757-3p 1 0 0
chr12:754120|754324 hsa-miR-6781-5p 1 0 0
chr12:754120|754324 hsa-miR-3065-3p 1 0 0
chr12:754120|754324 hsa-miR-16-5p 0 1 0
chr12:754120|754324 hsa-miR-10400-5p 1 1 0
chr12:754120|754324 hsa-miR-1207-5p 1 0 0
chr12:754120|754324 hsa-miR-4763-3p 1 0 0
chr12:754120|754324 hsa-miR-6787-5p 1 0 0
chr12:754120|754324 hsa-miR-6865-5p 1 0 0
chr12:754120|754324 hsa-miR-6851-5p 1 0 0
chr12:754120|754324 hsa-miR-1249-5p 1 0 0
chr12:754120|754324 hsa-miR-6797-5p 1 1 0
chr12:754120|754324 hsa-miR-6875-5p 1 0 0
chr12:754120|754324 hsa-miR-3620-5p 1 0 0
chr12:754120|754324 hsa-miR-6836-5p 1 0 0
chr12:754120|754324 hsa-miR-10396b-5p 1 0 0
chr12:754120|754324 hsa-miR-449c-5p 1 0 0
chr12:754120|754324 hsa-miR-4685-5p 1 0 0
chr12:754120|754324 hsa-miR-4725-3p 1 0 0
chr12:754120|754324 hsa-miR-4726-5p 1 0 0
chr12:754120|754324 hsa-miR-6845-5p 1 1 0
chr12:754120|754324 hsa-miR-6762-5p 1 1 0
chr12:754120|754324 hsa-miR-6837-5p 1 0 0
chr12:754120|754324 hsa-miR-6859-5p 1 0 0
chr12:754120|754324 hsa-miR-4315 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr12:754120|754324
ORF Type ORF1
Protein Length 68
Nucleotide Length 204
Protein Sequence LQFTPGDFHGGFSVQTFVDRLKGASADFDVKLEKAAIVRHSHGLGLQLFDIILLLAPFLLWLLGAAAA
Nucleotide Sequence CTGCAGTTCACACCAGGCGACTTCCACGGTGGTTTCAGTGTCCAGACCTTTGTAGACCGTCTTAAAGGAGCCTCTGCCGATTTCGATGTCAAACTTGAGAAAGCGGCCATCGTTAGACATTCCCACGGCCTTGGTCTCCAGCTCTTCGATATCATCCTGCTGCTGGCTCCGTTCCTCCTGTGGCTCCTTGGCGCTGCCGCCGCC
CircID chr12:754120|754324
ORF Type ORF2
Protein Length 44
Nucleotide Length 132
Protein Sequence MPISMSNLRKRPSLDIPTALVSSSSISSCCWLRSSCGSLALPPP
Nucleotide Sequence CTGCCGATTTCGATGTCAAACTTGAGAAAGCGGCCATCGTTAGACATTCCCACGGCCTTGGTCTCCAGCTCTTCGATATCATCCTGCTGCTGGCTCCGTTCCTCCTGTGGCTCCTTGGCGCTGCCGCCGCCG
CircID chr12:754120|754324
ORF Type ORF3
Protein Length 47
Nucleotide Length 141
Protein Sequence METKAVGMSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQ
Nucleotide Sequence CTGGAGACCAAGGCCGTGGGAATGTCTAACGATGGCCGCTTTCTCAAGTTTGACATCGAAATCGGCAGAGGCTCCTTTAAGACGGTCTACAAAGGTCTGGACACTGAAACCACCGTGGAAGTCGCCTGGTGTGAACTGCAG
CircID chr12:754120|754324
ORF Type ORF4
Protein Length 51
Nucleotide Length 153
Protein Sequence MISKSWRPRPWECLTMAAFSSLTSKSAEAPLRRSTKVWTLKPPWKSPGVNC
Nucleotide Sequence ATGATATCGAAGAGCTGGAGACCAAGGCCGTGGGAATGTCTAACGATGGCCGCTTTCTCAAGTTTGACATCGAAATCGGCAGAGGCTCCTTTAAGACGGTCTACAAAGGTCTGGACACTGAAACCACCGTGGAAGTCGCCTGGTGTGAACTGC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab