CircNet

General Information

circRNA Basic Information

CircID	chr12:79592611\|79596658
Strand	-
CircType	exon
Host Gene	ENSG00000177425.10;
Algorism	find_circ;CIRI2;DCC;
Sequence	CACAACCAGTGTCTCTGAAGAAGATGTCTCAAGTAGATATTCTCGAACAGATAGAAGTGGGTTCCCTAGATATAACAGGGATGCAAATGTTTCAGGTACTCTGGTTTCAAGTAGCACACTGGAAAAGAAAATTGAAGATCTTGAAAAGGAAGTAGTAAGAGAAAGACAAGAAAACCTAAGACTTGTGAGACTGATGCAAGATAAAGAGGAAATGATTGGAAAACTCAAAGAAGAAATTGATTTATTAAATAGAGACCTAGATGACATAGAAGATGAAAATGAACAGCTAAAGCAGGAAAATAAAACTCTTTTGAAAGTTGTGGGTCAGCTGACCAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr12:79592611\|79596658	hsa-miR-29b-1-5p	0	1	1
chr12:79592611\|79596658	hsa-miR-29b-2-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr12:79592611\|79596658
ORF Type	ORF1
Protein Length	89
Nucleotide Length	267
Protein Sequence	MSSRSLFNKSISSLSFPIISSLSCISLTSLRFSCLSLTTSFSRSSIFFSSVLLETRVPETFASLLYLGNPLLSVREYLLETSSSETLVV
Nucleotide Sequence	ATGTCATCTAGGTCTCTATTTAATAAATCAATTTCTTCTTTGAGTTTTCCAATCATTTCCTCTTTATCTTGCATCAGTCTCACAAGTCTTAGGTTTTCTTGTCTTTCTCTTACTACTTCCTTTTCAAGATCTTCAATTTTCTTTTCCAGTGTGCTACTTGAAACCAGAGTACCTGAAACATTTGCATCCCTGTTATATCTAGGGAACCCACTTCTATCTGTTCGAGAATATCTACTTGAGACATCTTCTTCAGAGACACTGGTTGTG

CircID	chr12:79592611\|79596658
ORF Type	ORF2
Protein Length	47
Nucleotide Length	141
Protein Sequence	MQDKEEMIGKLKEEIDLLNRDLDDIEDENEQLKQENKTLLKVVGQLT
Nucleotide Sequence	ATGCAAGATAAAGAGGAAATGATTGGAAAACTCAAAGAAGAAATTGATTTATTAAATAGAGACCTAGATGACATAGAAGATGAAAATGAACAGCTAAAGCAGGAAAATAAAACTCTTTTGAAAGTTGTGGGTCAGCTGACC

CircID	chr12:79592611\|79596658
ORF Type	ORF3
Protein Length	44
Nucleotide Length	132
Protein Sequence	MSQVDILEQIEVGSLDITGMQMFQVLWFQVAHWKRKLKILKRK*
Nucleotide Sequence	ATGTCTCAAGTAGATATTCTCGAACAGATAGAAGTGGGTTCCCTAGATATAACAGGGATGCAAATGTTTCAGGTACTCTGGTTTCAAGTAGCACACTGGAAAAGAAAATTGAAGATCTTGAAAAGGAAGTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr12:79592611\|79596658	NOP56	2	3	0
chr12:79592611\|79596658	MOV10	0	29	0
chr12:79592611\|79596658	ELAVL1	12	29	5
chr12:79592611\|79596658	NUMA1	1	0	0
chr12:79592611\|79596658	SF3B4	1	0	2
chr12:79592611\|79596658	FAM120A	0	1	0
chr12:79592611\|79596658	RC3H1	0	4	0
chr12:79592611\|79596658	PRPF8	2	1	4
chr12:79592611\|79596658	YTHDF1	0	1	0
chr12:79592611\|79596658	UPF1	0	29	0
chr12:79592611\|79596658	SRSF10	0	1	2
chr12:79592611\|79596658	TAF15	1	1	0
chr12:79592611\|79596658	CAPRIN1	0	2	1
chr12:79592611\|79596658	FMR1	0	16	3
chr12:79592611\|79596658	FUS	0	5	0
chr12:79592611\|79596658	DGCR8	0	2	1
chr12:79592611\|79596658	SRSF7	0	0	1
chr12:79592611\|79596658	SRSF1	0	1	2
chr12:79592611\|79596658	NOP58	0	6	6
chr12:79592611\|79596658	SRSF3	0	1	0
chr12:79592611\|79596658	U2AF1	2	0	0
chr12:79592611\|79596658	ADAR	1	1	0
chr12:79592611\|79596658	U2AF2	21	16	2
chr12:79592611\|79596658	SRSF9	1	1	1
chr12:79592611\|79596658	DDX54	3	8	15
chr12:79592611\|79596658	HNRNPM	1	1	0
chr12:79592611\|79596658	SF3A3	2	0	0
chr12:79592611\|79596658	PTBP1	0	4	0
chr12:79592611\|79596658	HNRNPC	2	5	0
chr12:79592611\|79596658	HNRNPD	0	1	0
chr12:79592611\|79596658	TRA2A	0	3	6
chr12:79592611\|79596658	HNRNPA2B1	5	0	0
chr12:79592611\|79596658	ZNF184	1	2	6
chr12:79592611\|79596658	HNRNPA1	1	0	0
chr12:79592611\|79596658	ZC3H7B	0	1	0
chr12:79592611\|79596658	LARP4B	0	2	1
chr12:79592611\|79596658	SMNDC1	1	0	0
chr12:79592611\|79596658	ACIN1	0	3	4
chr12:79592611\|79596658	LIN28B	0	6	3
chr12:79592611\|79596658	LIN28A	0	2	1
chr12:79592611\|79596658	RANGAP1	0	1	0
chr12:79592611\|79596658	FXR1	0	4	0
chr12:79592611\|79596658	BCCIP	1	0	0
chr12:79592611\|79596658	IGF2BP1	0	10	0
chr12:79592611\|79596658	IGF2BP3	0	4	3
chr12:79592611\|79596658	IGF2BP2	1	27	13
chr12:79592611\|79596658	HNRNPUL1	0	1	0
chr12:79592611\|79596658	TARDBP	0	4	0
chr12:79592611\|79596658	YTHDC1	0	1	0
chr12:79592611\|79596658	BUD13	2	1	5
chr12:79592611\|79596658	RBFOX2	1	1	0
chr12:79592611\|79596658	CNBP	0	3	1
chr12:79592611\|79596658	SLTM	0	1	0
chr12:79592611\|79596658	RBM47	3	1	1
chr12:79592611\|79596658	CSTF2T	0	3	3
chr12:79592611\|79596658	FXR2	0	5	0
chr12:79592611\|79596658	TIA1	2	9	0
chr12:79592611\|79596658	AGO3	0	3	0
chr12:79592611\|79596658	TIAL1	1	2	0
chr12:79592611\|79596658	DKC1	0	1	0
chr12:79592611\|79596658	AGO2	0	57	5
chr12:79592611\|79596658	AGO1	0	11	0
chr12:79592611\|79596658	EWSR1	0	4	0
chr12:79592611\|79596658	EIF4A3	2	1	6
chr12:79592611\|79596658	FBL	0	3	6

CircRNA Information