CircNet

General Information

circRNA Basic Information

CircID	chr12:88109066\|88139564
Strand	-
CircType	exon
Host Gene	ENSG00000198707.14;
Algorism	find_circ;CIRI2;DCC;
Sequence	ATGAAAGCTCAAGAAGTGGAGCTGGCTTTGGAAGAAGTAGAAAAAGCTGGAGAAGAACAAGCAAAATTTGAAAATCAATTAAAAACTAAAGTAATGAAACTGGAAAATGAACTGGAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr12:88109066\|88139564
ORF Type	ORF1
Protein Length	39
Nucleotide Length	117
Protein Sequence	MKAQEVELALEEVEKAGEEQAKFENQLKTKVMKLENELE
Nucleotide Sequence	ATGAAAGCTCAAGAAGTGGAGCTGGCTTTGGAAGAAGTAGAAAAAGCTGGAGAAGAACAAGCAAAATTTGAAAATCAATTAAAAACTAAAGTAATGAAACTGGAAAATGAACTGGAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr12:88109066\|88139564	NOP56	0	1	0
chr12:88109066\|88139564	ELAVL1	1	4	0
chr12:88109066\|88139564	PRPF8	1	1	0
chr12:88109066\|88139564	TAF15	2	0	0
chr12:88109066\|88139564	NUDT21	0	2	0
chr12:88109066\|88139564	FUS	1	1	0
chr12:88109066\|88139564	WDR33	0	1	0
chr12:88109066\|88139564	SRSF1	0	1	1
chr12:88109066\|88139564	NOP58	0	1	0
chr12:88109066\|88139564	SRSF3	0	1	0
chr12:88109066\|88139564	U2AF1	0	2	0
chr12:88109066\|88139564	U2AF2	5	9	0
chr12:88109066\|88139564	DDX54	0	1	1
chr12:88109066\|88139564	FIP1L1	0	1	0
chr12:88109066\|88139564	PTBP1	0	3	0
chr12:88109066\|88139564	HNRNPC	2	7	4
chr12:88109066\|88139564	TRA2A	0	0	2
chr12:88109066\|88139564	ZC3H7B	0	1	0
chr12:88109066\|88139564	HNRNPA1	4	1	0
chr12:88109066\|88139564	LIN28B	0	1	0
chr12:88109066\|88139564	IGF2BP2	0	1	3
chr12:88109066\|88139564	HNRNPUL1	1	0	0
chr12:88109066\|88139564	TARDBP	0	8	0
chr12:88109066\|88139564	BUD13	1	0	2
chr12:88109066\|88139564	RBFOX2	2	0	0
chr12:88109066\|88139564	CSTF2T	0	3	0
chr12:88109066\|88139564	CSTF2	0	4	0
chr12:88109066\|88139564	TIAL1	0	1	0
chr12:88109066\|88139564	EIF4A3	3	1	2
chr12:88109066\|88139564	FBL	1	0	2

CircRNA Information