CircRNA Information

General Information
circRNA Basic Information
CircID chr12:89524617|89524767
Strand -
CircType exon
Host Gene ENSG00000257594.3;
Algorism CIRI2;
Sequence CCACAGCTCGAGCTCAGGTACTTCCCAGCAGGTTCTTCCTTTCATGCAGGCGCTAGGCTCCTTTCCAGCCACCCAGGCTTTCCAGGGGTCACCTGAGCCCTCTCGGTCCTCGGCCTCCGGCACAGCCCAACTCCTCTCTCCCTACTTCCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:89524617|89524767 hsa-miR-185-5p 0 0 1
chr12:89524617|89524767 hsa-miR-185-3p 0 0 1
chr12:89524617|89524767 hsa-miR-370-5p 0 0 1
chr12:89524617|89524767 hsa-miR-370-3p 0 0 1
chr12:89524617|89524767 hsa-miR-488-5p 0 0 1
chr12:89524617|89524767 hsa-miR-488-3p 0 0 1
chr12:89524617|89524767 hsa-miR-571 0 0 1
chr12:89524617|89524767 hsa-miR-611 1 1 1
chr12:89524617|89524767 hsa-miR-661 1 1 1
chr12:89524617|89524767 hsa-miR-1293 0 0 1
chr12:89524617|89524767 hsa-miR-1321 0 0 1
chr12:89524617|89524767 hsa-miR-125a-3p 0 1 1
chr12:89524617|89524767 hsa-miR-331-3p 0 0 1
chr12:89524617|89524767 hsa-miR-875-3p 0 1 1
chr12:89524617|89524767 hsa-miR-548b-3p 0 0 1
chr12:89524617|89524767 hsa-miR-24 0 0 1
chr12:89524617|89524767 hsa-miR-762 1 0 0
chr12:89524617|89524767 hsa-miR-1253 1 0 0
chr12:89524617|89524767 hsa-miR-1275 1 0 0
chr12:89524617|89524767 hsa-miR-2110 1 0 0
chr12:89524617|89524767 hsa-miR-3131 1 1 0
chr12:89524617|89524767 hsa-miR-3132 1 0 0
chr12:89524617|89524767 hsa-miR-3141 1 0 0
chr12:89524617|89524767 hsa-miR-3147 1 1 0
chr12:89524617|89524767 hsa-miR-3175 1 0 0
chr12:89524617|89524767 hsa-miR-4259 1 0 0
chr12:89524617|89524767 hsa-miR-3652 1 0 0
chr12:89524617|89524767 hsa-miR-3916 1 1 0
chr12:89524617|89524767 hsa-miR-4437 0 1 0
chr12:89524617|89524767 hsa-miR-4498 1 0 0
chr12:89524617|89524767 hsa-miR-4507 1 0 0
chr12:89524617|89524767 hsa-miR-4516 1 0 0
chr12:89524617|89524767 hsa-miR-4523 1 1 0
chr12:89524617|89524767 hsa-miR-4533 1 0 0
chr12:89524617|89524767 hsa-miR-1587 1 1 0
chr12:89524617|89524767 hsa-miR-3978 0 1 0
chr12:89524617|89524767 hsa-miR-4651 1 0 0
chr12:89524617|89524767 hsa-miR-4656 1 0 0
chr12:89524617|89524767 hsa-miR-4675 0 1 0
chr12:89524617|89524767 hsa-miR-4688 1 0 0
chr12:89524617|89524767 hsa-miR-4689 1 0 0
chr12:89524617|89524767 hsa-miR-4706 1 0 0
chr12:89524617|89524767 hsa-miR-4721 1 1 0
chr12:89524617|89524767 hsa-miR-4739 1 0 0
chr12:89524617|89524767 hsa-miR-4741 1 1 0
chr12:89524617|89524767 hsa-miR-4784 1 0 0
chr12:89524617|89524767 hsa-miR-5192 1 0 0
chr12:89524617|89524767 hsa-miR-5698 1 0 0
chr12:89524617|89524767 hsa-miR-5739 1 0 0
chr12:89524617|89524767 hsa-miR-6081 1 0 0
chr12:89524617|89524767 hsa-miR-6086 1 0 0
chr12:89524617|89524767 hsa-miR-6090 1 0 0
chr12:89524617|89524767 hsa-miR-6127 1 0 0
chr12:89524617|89524767 hsa-miR-6133 1 1 0
chr12:89524617|89524767 hsa-miR-7706 1 0 0
chr12:89524617|89524767 hsa-miR-7974 1 0 0
chr12:89524617|89524767 hsa-miR-8085 1 1 0
chr12:89524617|89524767 hsa-miR-6734-5p 1 0 0
chr12:89524617|89524767 hsa-miR-671-5p 1 1 0
chr12:89524617|89524767 hsa-miR-3150a-3p 1 0 0
chr12:89524617|89524767 hsa-miR-7106-5p 1 0 0
chr12:89524617|89524767 hsa-miR-4687-3p 1 0 0
chr12:89524617|89524767 hsa-miR-6799-5p 1 0 0
chr12:89524617|89524767 hsa-miR-3692-5p 0 1 0
chr12:89524617|89524767 hsa-miR-766-5p 1 0 0
chr12:89524617|89524767 hsa-miR-6089 1 1 0
chr12:89524617|89524767 hsa-miR-6757-5p 1 0 0
chr12:89524617|89524767 hsa-miR-6880-5p 1 0 0
chr12:89524617|89524767 hsa-miR-4695-5p 1 0 0
chr12:89524617|89524767 hsa-miR-6746-5p 0 1 0
chr12:89524617|89524767 hsa-miR-4653-3p 1 0 0
chr12:89524617|89524767 hsa-miR-7160-5p 1 0 0
chr12:89524617|89524767 hsa-miR-24-3p 0 1 0
chr12:89524617|89524767 hsa-miR-6741-5p 1 0 0
chr12:89524617|89524767 hsa-miR-4655-5p 1 0 0
chr12:89524617|89524767 hsa-miR-197-5p 1 0 0
chr12:89524617|89524767 hsa-miR-7845-5p 1 0 0
chr12:89524617|89524767 hsa-miR-6742-5p 1 0 0
chr12:89524617|89524767 hsa-miR-6871-5p 1 0 0
chr12:89524617|89524767 hsa-miR-3180-3p 1 0 0
chr12:89524617|89524767 hsa-miR-6772-5p 1 0 0
chr12:89524617|89524767 hsa-miR-6829-5p 1 0 0
chr12:89524617|89524767 hsa-miR-6732-5p 1 0 0
chr12:89524617|89524767 hsa-miR-6827-5p 1 0 0
chr12:89524617|89524767 hsa-miR-6798-5p 1 0 0
chr12:89524617|89524767 hsa-miR-6760-5p 1 1 0
chr12:89524617|89524767 hsa-miR-3934-3p 0 1 0
chr12:89524617|89524767 hsa-miR-5088-5p 0 1 0
chr12:89524617|89524767 hsa-miR-3944-3p 1 0 0
chr12:89524617|89524767 hsa-miR-296-3p 1 0 0
chr12:89524617|89524767 hsa-let-7b-5p 1 0 0
chr12:89524617|89524767 hsa-miR-149-3p 1 1 0
chr12:89524617|89524767 hsa-miR-6824-5p 1 0 0
chr12:89524617|89524767 hsa-miR-3162-5p 1 1 0
chr12:89524617|89524767 hsa-miR-6781-5p 1 0 0
chr12:89524617|89524767 hsa-miR-6878-5p 1 0 0
chr12:89524617|89524767 hsa-miR-6720-3p 1 1 0
chr12:89524617|89524767 hsa-miR-6832-5p 1 0 0
chr12:89524617|89524767 hsa-miR-6761-5p 0 1 0
chr12:89524617|89524767 hsa-miR-5585-5p 0 1 0
chr12:89524617|89524767 hsa-miR-1207-5p 1 0 0
chr12:89524617|89524767 hsa-miR-1233-5p 1 0 0
chr12:89524617|89524767 hsa-miR-4763-3p 1 0 0
chr12:89524617|89524767 hsa-miR-6769b-5p 1 0 0
chr12:89524617|89524767 hsa-miR-6778-5p 1 0 0
chr12:89524617|89524767 hsa-miR-6812-5p 1 0 0
chr12:89524617|89524767 hsa-miR-6870-5p 1 0 0
chr12:89524617|89524767 hsa-miR-1343-5p 1 0 0
chr12:89524617|89524767 hsa-miR-5001-5p 1 0 0
chr12:89524617|89524767 hsa-miR-6743-5p 1 0 0
chr12:89524617|89524767 hsa-miR-6754-5p 1 0 0
chr12:89524617|89524767 hsa-miR-6756-5p 1 0 0
chr12:89524617|89524767 hsa-miR-6815-5p 0 1 0
chr12:89524617|89524767 hsa-miR-6851-5p 1 0 0
chr12:89524617|89524767 hsa-miR-7107-5p 1 0 0
chr12:89524617|89524767 hsa-miR-11181-3p 1 0 0
chr12:89524617|89524767 hsa-miR-1249-5p 1 1 0
chr12:89524617|89524767 hsa-miR-6763-5p 1 0 0
chr12:89524617|89524767 hsa-miR-6779-5p 1 0 0
chr12:89524617|89524767 hsa-miR-6780a-5p 1 0 0
chr12:89524617|89524767 hsa-miR-6797-5p 1 0 0
chr12:89524617|89524767 hsa-miR-6808-5p 1 0 0
chr12:89524617|89524767 hsa-miR-7111-5p 1 0 0
chr12:89524617|89524767 hsa-miR-3620-5p 1 1 0
chr12:89524617|89524767 hsa-miR-4728-5p 1 0 0
chr12:89524617|89524767 hsa-miR-1237-5p 1 0 0
chr12:89524617|89524767 hsa-miR-4649-5p 1 0 0
chr12:89524617|89524767 hsa-miR-4745-5p 1 0 0
chr12:89524617|89524767 hsa-miR-6729-5p 1 0 0
chr12:89524617|89524767 hsa-miR-6777-5p 1 0 0
chr12:89524617|89524767 hsa-miR-6794-5p 1 0 0
chr12:89524617|89524767 hsa-miR-6846-5p 1 0 0
chr12:89524617|89524767 hsa-miR-6848-5p 1 0 0
chr12:89524617|89524767 hsa-miR-6883-5p 1 0 0
chr12:89524617|89524767 hsa-miR-6889-5p 1 0 0
chr12:89524617|89524767 hsa-miR-6831-5p 1 0 0
chr12:89524617|89524767 hsa-miR-939-5p 1 0 0
chr12:89524617|89524767 hsa-miR-3940-5p 1 0 0
chr12:89524617|89524767 hsa-miR-30c-1-3p 1 0 0
chr12:89524617|89524767 hsa-miR-6731-5p 1 1 0
chr12:89524617|89524767 hsa-miR-6758-5p 1 1 0
chr12:89524617|89524767 hsa-miR-6856-5p 1 1 0
chr12:89524617|89524767 hsa-miR-1271-3p 1 0 0
chr12:89524617|89524767 hsa-miR-1914-3p 1 0 0
chr12:89524617|89524767 hsa-miR-3173-3p 1 0 0
chr12:89524617|89524767 hsa-miR-4646-5p 0 1 0
chr12:89524617|89524767 hsa-miR-4747-5p 1 1 0
chr12:89524617|89524767 hsa-miR-6891-5p 1 0 0
chr12:89524617|89524767 hsa-miR-4716-3p 1 0 0
chr12:89524617|89524767 hsa-miR-6785-5p 1 0 0
chr12:89524617|89524767 hsa-miR-4667-5p 1 0 0
chr12:89524617|89524767 hsa-miR-6791-5p 1 0 0
chr12:89524617|89524767 hsa-miR-550a-5p 1 1 0
chr12:89524617|89524767 hsa-miR-10400-3p 1 0 0
chr12:89524617|89524767 hsa-miR-6859-5p 1 0 0
chr12:89524617|89524767 hsa-miR-6884-5p 1 0 0
chr12:89524617|89524767 hsa-miR-135a-2-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr12:89524617|89524767
ORF Type ORF1
Protein Length 36
Nucleotide Length 108
Protein Sequence MQALGSFPATQAFQGSPEPSRSSASGTAQLLSPYFL
Nucleotide Sequence ATGCAGGCGCTAGGCTCCTTTCCAGCCACCCAGGCTTTCCAGGGGTCACCTGAGCCCTCTCGGTCCTCGGCCTCCGGCACAGCCCAACTCCTCTCTCCCTACTTCCTC
CircID chr12:89524617|89524767
ORF Type ORF2
Protein Length 27
Nucleotide Length 84
Protein Sequence MCRRPRTERAQVTPGKPGWLERSLAPA
Nucleotide Sequence CTGTGCCGGAGGCCGAGGACCGAGAGGGCTCAGGTGACCCCTGGAAAGCCTGGGTGGCTGGAAAGGAGCCTAGCGCCTGCATGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab