CircRNA Information

General Information
circRNA Basic Information
CircID chr12:9076756|9076888
Strand -
CircType exon
Host Gene ENSG00000175899.13;
Algorism CIRI2;
Sequence CTTTCTTCACAGCTTCCTCATTAAGTGACTTGAGTACTTCCTTCCTCTTGTCCTGGTTACCTGCCAGGGCAAAAGCATAGGCCAGCAGTGCTTTGGTATATACATGGCTGCCATGGTCCCCTTCTTGTGCTGT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:9076756|9076888 hsa-miR-224-5p 0 0 1
chr12:9076756|9076888 hsa-miR-224-3p 0 0 1
chr12:9076756|9076888 hsa-miR-591 0 0 1
chr12:9076756|9076888 hsa-miR-874-5p 0 0 1
chr12:9076756|9076888 hsa-miR-874-3p 0 0 1
chr12:9076756|9076888 hsa-miR-888-5p 0 0 1
chr12:9076756|9076888 hsa-miR-888-3p 0 0 1
chr12:9076756|9076888 hsa-miR-1252-5p 0 0 1
chr12:9076756|9076888 hsa-miR-1252-3p 0 0 1
chr12:9076756|9076888 hsa-miR-885-3p 0 0 1
chr12:9076756|9076888 hsa-miR-146b-3p 0 0 1
chr12:9076756|9076888 hsa-miR-330-3p 0 1 1
chr12:9076756|9076888 hsa-miR-1207-5p 0 0 1
chr12:9076756|9076888 hsa-miR-920 0 1 0
chr12:9076756|9076888 hsa-miR-3125 0 1 0
chr12:9076756|9076888 hsa-miR-3154 1 1 0
chr12:9076756|9076888 hsa-miR-3916 0 1 0
chr12:9076756|9076888 hsa-miR-3936 1 0 0
chr12:9076756|9076888 hsa-miR-4436a 0 1 0
chr12:9076756|9076888 hsa-miR-4533 0 1 0
chr12:9076756|9076888 hsa-miR-4736 0 1 0
chr12:9076756|9076888 hsa-miR-4739 1 0 0
chr12:9076756|9076888 hsa-miR-6133 1 0 0
chr12:9076756|9076888 hsa-miR-1227-5p 1 0 0
chr12:9076756|9076888 hsa-miR-6827-5p 1 0 0
chr12:9076756|9076888 hsa-miR-6798-5p 1 0 0
chr12:9076756|9076888 hsa-miR-4640-5p 1 0 0
chr12:9076756|9076888 hsa-miR-6753-5p 0 1 0
chr12:9076756|9076888 hsa-miR-3191-3p 1 0 0
chr12:9076756|9076888 hsa-miR-6811-3p 0 1 0
chr12:9076756|9076888 hsa-miR-3140-3p 0 1 0
chr12:9076756|9076888 hsa-miR-3144-5p 0 1 0
chr12:9076756|9076888 hsa-miR-6775-5p 0 1 0
chr12:9076756|9076888 hsa-miR-6797-5p 1 0 0
chr12:9076756|9076888 hsa-miR-4749-5p 1 0 0
chr12:9076756|9076888 hsa-miR-365b-5p 1 0 0
chr12:9076756|9076888 hsa-miR-6876-5p 0 1 0
chr12:9076756|9076888 hsa-miR-6762-5p 1 1 0
chr12:9076756|9076888 hsa-miR-6859-5p 0 1 0
chr12:9076756|9076888 hsa-miR-3922-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr12:9076756|9076888
ORF Type ORF1
Protein Length 27
Nucleotide Length 81
Protein Sequence MVTCQGKSIGQQCFGIYMAAMVPFLCC
Nucleotide Sequence CTGGTTACCTGCCAGGGCAAAAGCATAGGCCAGCAGTGCTTTGGTATATACATGGCTGCCATGGTCCCCTTCTTGTGCTGT

CircID chr12:9076756|9076888
ORF Type ORF2
Protein Length 29
Nucleotide Length 87
Protein Sequence MLAYAFALAGNQDKRKEVLKSLNEEAVKK
Nucleotide Sequence CTGCTGGCCTATGCTTTTGCCCTGGCAGGTAACCAGGACAAGAGGAAGGAAGTACTCAAGTCACTTAATGAGGAAGCTGTGAAGAAA

CircID chr12:9076756|9076888
ORF Type ORF3
Protein Length 35
Nucleotide Length 108
Protein Sequence MAAMYIPKHCWPMLLPWQVTRTRGRKYSSHLMRKL
Nucleotide Sequence ATGGCAGCCATGTATATACCAAAGCACTGCTGGCCTATGCTTTTGCCCTGGCAGGTAACCAGGACAAGAGGAAGGAAGTACTCAAGTCACTTAATGAGGAAGCTGTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites