CircRNA Information

General Information
circRNA Basic Information
CircID chr12:9099381|9181132
Strand -
CircType exon
Host Gene ENSG00000175899.13;
Algorism CIRI2;
Sequence CTTGTTGGCCAGACAATTTTCAACATCATATTTTGCAGAATCCCCAATCACGTCCCCGGTAGGTAAAACAGCATAGATGAGCAACCGAGCGACAGGAGCAATGTCTGACTTCACAGGGATTGAGATGGAAAAATGGCCCTTCAATCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:9099381|9181132 hsa-miR-587 0 0 1
chr12:9099381|9181132 hsa-miR-632 0 0 1
chr12:9099381|9181132 hsa-miR-641 0 0 1
chr12:9099381|9181132 hsa-miR-650 0 0 1
chr12:9099381|9181132 hsa-miR-653-5p 0 0 1
chr12:9099381|9181132 hsa-miR-653-3p 0 0 1
chr12:9099381|9181132 hsa-miR-1178-5p 0 0 1
chr12:9099381|9181132 hsa-miR-1178-3p 0 0 1
chr12:9099381|9181132 hsa-miR-1231 0 1 1
chr12:9099381|9181132 hsa-miR-1256 0 0 1
chr12:9099381|9181132 hsa-miR-1272 0 0 1
chr12:9099381|9181132 hsa-miR-1288-5p 0 0 1
chr12:9099381|9181132 hsa-miR-1288-3p 0 0 1
chr12:9099381|9181132 hsa-miR-1321 0 0 1
chr12:9099381|9181132 hsa-miR-1322 0 0 1
chr12:9099381|9181132 hsa-miR-1324 0 0 1
chr12:9099381|9181132 hsa-miR-423-3p 0 0 1
chr12:9099381|9181132 hsa-miR-339-5p 0 0 1
chr12:9099381|9181132 hsa-miR-509-3p 0 0 1
chr12:9099381|9181132 hsa-miR-490-5p 0 0 1
chr12:9099381|9181132 hsa-miR-1274a 0 0 1
chr12:9099381|9181132 hsa-miR-1274b 0 0 1
chr12:9099381|9181132 hsa-miR-7 0 0 1
chr12:9099381|9181132 hsa-miR-1269 0 0 1
chr12:9099381|9181132 hsa-miR-544 0 0 1
chr12:9099381|9181132 hsa-miR-1294 1 1 0
chr12:9099381|9181132 hsa-miR-1268a 1 0 0
chr12:9099381|9181132 hsa-miR-4320 0 1 0
chr12:9099381|9181132 hsa-miR-4270 1 0 0
chr12:9099381|9181132 hsa-miR-3611 0 1 0
chr12:9099381|9181132 hsa-miR-3612 0 1 0
chr12:9099381|9181132 hsa-miR-3655 1 0 0
chr12:9099381|9181132 hsa-miR-1268b 1 0 0
chr12:9099381|9181132 hsa-miR-4450 1 1 0
chr12:9099381|9181132 hsa-miR-4678 0 1 0
chr12:9099381|9181132 hsa-miR-4739 1 0 0
chr12:9099381|9181132 hsa-miR-6165 1 1 0
chr12:9099381|9181132 hsa-miR-8089 1 1 0
chr12:9099381|9181132 hsa-miR-12115 1 0 0
chr12:9099381|9181132 hsa-miR-6825-5p 1 0 0
chr12:9099381|9181132 hsa-miR-6857-5p 1 0 0
chr12:9099381|9181132 hsa-miR-4695-5p 1 0 0
chr12:9099381|9181132 hsa-miR-4722-5p 1 0 0
chr12:9099381|9181132 hsa-miR-4655-5p 1 1 0
chr12:9099381|9181132 hsa-miR-6772-3p 0 1 0
chr12:9099381|9181132 hsa-miR-1908-5p 1 0 0
chr12:9099381|9181132 hsa-miR-4732-5p 1 0 0
chr12:9099381|9181132 hsa-miR-146b-3p 0 1 0
chr12:9099381|9181132 hsa-miR-450a-2-3p 0 1 0
chr12:9099381|9181132 hsa-miR-6864-5p 1 0 0
chr12:9099381|9181132 hsa-miR-3191-3p 0 1 0
chr12:9099381|9181132 hsa-miR-6508-3p 0 1 0
chr12:9099381|9181132 hsa-miR-1249-5p 1 0 0
chr12:9099381|9181132 hsa-miR-6751-5p 1 0 0
chr12:9099381|9181132 hsa-miR-328-5p 1 0 0
chr12:9099381|9181132 hsa-miR-3184-5p 1 0 0
chr12:9099381|9181132 hsa-miR-4756-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr12:9099381|9181132
ORF Type ORF1
Protein Length 48
Nucleotide Length 144
Protein Sequence MKGHFSISIPVKSDIAPVARLLIYAVLPTGDVIGDSAKYDVENCLANK
Nucleotide Sequence TTGAAGGGCCATTTTTCCATCTCAATCCCTGTGAAGTCAGACATTGCTCCTGTCGCTCGGTTGCTCATCTATGCTGTTTTACCTACCGGGGACGTGATTGGGGATTCTGCAAAATATGATGTTGAAAATTGTCTGGCCAACAAG

CircID chr12:9099381|9181132
ORF Type ORF1
Protein Length 27
Nucleotide Length 81
Protein Sequence MALHVFLLHKQSMSPSSDNASLCHYIH
Nucleotide Sequence ATGGCCCTTCATGTCTTCCTGCTTCACAAGCAGTCCATGAGTCCCAGTTCGGACAATGCCTCCCTTTGCCATTATATCCAC

CircID chr12:9099381|9181132
ORF Type ORF2
Protein Length 31
Nucleotide Length 96
Protein Sequence MSNRATGAMSDFTGIEMEKWPFMSSCFTSSP
Nucleotide Sequence ATGAGCAACCGAGCGACAGGAGCAATGTCTGACTTCACAGGGATTGAGATGGAAAAATGGCCCTTCATGTCTTCCTGCTTCACAAGCAGTCCATGA

CircID chr12:9099381|9181132
ORF Type ORF3
Protein Length 36
Nucleotide Length 108
Protein Sequence MTSQGLRWKNGPSCLPASQAVHESQFGQCLPLPLYP
Nucleotide Sequence CTGACTTCACAGGGATTGAGATGGAAAAATGGCCCTTCATGTCTTCCTGCTTCACAAGCAGTCCATGAGTCCCAGTTCGGACAATGCCTCCCTTTGCCATTATATCCA

CircID chr12:9099381|9181132
ORF Type ORF4
Protein Length 68
Nucleotide Length 204
Protein Sequence MAKGGIVRTGTHGLLVKQEDMKGHFSISIPVKSDIAPVARLLIYAVLPTGDVIGDSAKYDVENCLANK
Nucleotide Sequence ATGGCAAAGGGAGGCATTGTCCGAACTGGGACTCATGGACTGCTTGTGAAGCAGGAAGACATGAAGGGCCATTTTTCCATCTCAATCCCTGTGAAGTCAGACATTGCTCCTGTCGCTCGGTTGCTCATCTATGCTGTTTTACCTACCGGGGACGTGATTGGGGATTCTGCAAAATATGATGTTGAAAATTGTCTGGCCAACAAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites